Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
Additional file 1: Figure S1. Genus-level composition based on analysis of 16S miTags. Abundant genera (the top 30 genera in terms of maximum relative abundance) are shown with all other genera grouped together as ‘Minor or unclassified’. The four groups: Arctic-Surface (0-100 m), Arctic-Deep (200-4...
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ftdatacite:10.6084/m9.figshare.12072561.v1 2024-03-31T07:49:18+00:00 Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... Cao, Shunan Zhang, Weipeng Ding, Wei Wang, Meng Fan, Shen Yang, Bo Mcminn, Andrew Wang, Min Xie, Bin-bin Qin, Qi-Long Chen, Xiu-Lan He, Jianfeng Zhang, Yu-Zhong 2020 https://dx.doi.org/10.6084/m9.figshare.12072561.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Structure_and_function_of_the_Arctic_and_Antarctic_marine_microbiota_as_revealed_by_metagenomics/12072561/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.12072561 https://dx.doi.org/10.1186/s40168-020-00826-9 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences Text Journal contribution article-journal ScholarlyArticle 2020 ftdatacite https://doi.org/10.6084/m9.figshare.12072561.v110.6084/m9.figshare.1207256110.1186/s40168-020-00826-9 2024-03-04T12:08:40Z Additional file 1: Figure S1. Genus-level composition based on analysis of 16S miTags. Abundant genera (the top 30 genera in terms of maximum relative abundance) are shown with all other genera grouped together as ‘Minor or unclassified’. The four groups: Arctic-Surface (0-100 m), Arctic-Deep (200-4000 m), Antarctic-Surface (0-100 m), and Antarctic-Deep (200-4000 m). Figure S2. Taxonomic distribution of the 214 MAGs recovered from the polar metagenomes. All the MAGs have 80% or higher completeness. Figure S3. Comparison between the Arctic and Antarctic microbiomes. A Venn diagram showing the distribution of OTUs across the Arctic and the Antarctic miTags. Only OTUs with more than 2 miTag numbers are included for analysis. B BLASTp searching Antarctic orthologs using the Arctic orthologs as queries. C BLASTp searching Arctic orthologs using the Antarctic orthologs as queries. Orthologs of lower than 40% similarity or higher than 1e-7 e-value were considered as ‘specific’. Figure S4. Functions enriched in the ... Text Antarc* Antarctic Arctic DataCite Metadata Store (German National Library of Science and Technology) Antarctic Arctic The Antarctic Venn ENVELOPE(9.281,9.281,63.350,63.350) |
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Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences |
spellingShingle |
Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences Cao, Shunan Zhang, Weipeng Ding, Wei Wang, Meng Fan, Shen Yang, Bo Mcminn, Andrew Wang, Min Xie, Bin-bin Qin, Qi-Long Chen, Xiu-Lan He, Jianfeng Zhang, Yu-Zhong Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... |
topic_facet |
Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences |
description |
Additional file 1: Figure S1. Genus-level composition based on analysis of 16S miTags. Abundant genera (the top 30 genera in terms of maximum relative abundance) are shown with all other genera grouped together as ‘Minor or unclassified’. The four groups: Arctic-Surface (0-100 m), Arctic-Deep (200-4000 m), Antarctic-Surface (0-100 m), and Antarctic-Deep (200-4000 m). Figure S2. Taxonomic distribution of the 214 MAGs recovered from the polar metagenomes. All the MAGs have 80% or higher completeness. Figure S3. Comparison between the Arctic and Antarctic microbiomes. A Venn diagram showing the distribution of OTUs across the Arctic and the Antarctic miTags. Only OTUs with more than 2 miTag numbers are included for analysis. B BLASTp searching Antarctic orthologs using the Arctic orthologs as queries. C BLASTp searching Arctic orthologs using the Antarctic orthologs as queries. Orthologs of lower than 40% similarity or higher than 1e-7 e-value were considered as ‘specific’. Figure S4. Functions enriched in the ... |
format |
Text |
author |
Cao, Shunan Zhang, Weipeng Ding, Wei Wang, Meng Fan, Shen Yang, Bo Mcminn, Andrew Wang, Min Xie, Bin-bin Qin, Qi-Long Chen, Xiu-Lan He, Jianfeng Zhang, Yu-Zhong |
author_facet |
Cao, Shunan Zhang, Weipeng Ding, Wei Wang, Meng Fan, Shen Yang, Bo Mcminn, Andrew Wang, Min Xie, Bin-bin Qin, Qi-Long Chen, Xiu-Lan He, Jianfeng Zhang, Yu-Zhong |
author_sort |
Cao, Shunan |
title |
Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... |
title_short |
Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... |
title_full |
Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... |
title_fullStr |
Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... |
title_full_unstemmed |
Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... |
title_sort |
additional file 1 of structure and function of the arctic and antarctic marine microbiota as revealed by metagenomics ... |
publisher |
figshare |
publishDate |
2020 |
url |
https://dx.doi.org/10.6084/m9.figshare.12072561.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Structure_and_function_of_the_Arctic_and_Antarctic_marine_microbiota_as_revealed_by_metagenomics/12072561/1 |
long_lat |
ENVELOPE(9.281,9.281,63.350,63.350) |
geographic |
Antarctic Arctic The Antarctic Venn |
geographic_facet |
Antarctic Arctic The Antarctic Venn |
genre |
Antarc* Antarctic Arctic |
genre_facet |
Antarc* Antarctic Arctic |
op_relation |
https://dx.doi.org/10.6084/m9.figshare.12072561 https://dx.doi.org/10.1186/s40168-020-00826-9 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.6084/m9.figshare.12072561.v110.6084/m9.figshare.1207256110.1186/s40168-020-00826-9 |
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1795038432449265664 |