Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...

Additional file 1: Figure S1. Genus-level composition based on analysis of 16S miTags. Abundant genera (the top 30 genera in terms of maximum relative abundance) are shown with all other genera grouped together as ‘Minor or unclassified’. The four groups: Arctic-Surface (0-100 m), Arctic-Deep (200-4...

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Main Authors: Cao, Shunan, Zhang, Weipeng, Ding, Wei, Wang, Meng, Fan, Shen, Yang, Bo, Mcminn, Andrew, Wang, Min, Xie, Bin-bin, Qin, Qi-Long, Chen, Xiu-Lan, He, Jianfeng, Zhang, Yu-Zhong
Format: Text
Language:unknown
Published: figshare 2020
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Online Access:https://dx.doi.org/10.6084/m9.figshare.12072561.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Structure_and_function_of_the_Arctic_and_Antarctic_marine_microbiota_as_revealed_by_metagenomics/12072561/1
id ftdatacite:10.6084/m9.figshare.12072561.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.12072561.v1 2024-03-31T07:49:18+00:00 Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ... Cao, Shunan Zhang, Weipeng Ding, Wei Wang, Meng Fan, Shen Yang, Bo Mcminn, Andrew Wang, Min Xie, Bin-bin Qin, Qi-Long Chen, Xiu-Lan He, Jianfeng Zhang, Yu-Zhong 2020 https://dx.doi.org/10.6084/m9.figshare.12072561.v1 https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Structure_and_function_of_the_Arctic_and_Antarctic_marine_microbiota_as_revealed_by_metagenomics/12072561/1 unknown figshare https://dx.doi.org/10.6084/m9.figshare.12072561 https://dx.doi.org/10.1186/s40168-020-00826-9 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Microbiology FOS Biological sciences Oceanography FOS Earth and related environmental sciences Text Journal contribution article-journal ScholarlyArticle 2020 ftdatacite https://doi.org/10.6084/m9.figshare.12072561.v110.6084/m9.figshare.1207256110.1186/s40168-020-00826-9 2024-03-04T12:08:40Z Additional file 1: Figure S1. Genus-level composition based on analysis of 16S miTags. Abundant genera (the top 30 genera in terms of maximum relative abundance) are shown with all other genera grouped together as ‘Minor or unclassified’. The four groups: Arctic-Surface (0-100 m), Arctic-Deep (200-4000 m), Antarctic-Surface (0-100 m), and Antarctic-Deep (200-4000 m). Figure S2. Taxonomic distribution of the 214 MAGs recovered from the polar metagenomes. All the MAGs have 80% or higher completeness. Figure S3. Comparison between the Arctic and Antarctic microbiomes. A Venn diagram showing the distribution of OTUs across the Arctic and the Antarctic miTags. Only OTUs with more than 2 miTag numbers are included for analysis. B BLASTp searching Antarctic orthologs using the Arctic orthologs as queries. C BLASTp searching Arctic orthologs using the Antarctic orthologs as queries. Orthologs of lower than 40% similarity or higher than 1e-7 e-value were considered as ‘specific’. Figure S4. Functions enriched in the ... Text Antarc* Antarctic Arctic DataCite Metadata Store (German National Library of Science and Technology) Antarctic Arctic The Antarctic Venn ENVELOPE(9.281,9.281,63.350,63.350)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Microbiology
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
spellingShingle Microbiology
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
Cao, Shunan
Zhang, Weipeng
Ding, Wei
Wang, Meng
Fan, Shen
Yang, Bo
Mcminn, Andrew
Wang, Min
Xie, Bin-bin
Qin, Qi-Long
Chen, Xiu-Lan
He, Jianfeng
Zhang, Yu-Zhong
Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
topic_facet Microbiology
FOS Biological sciences
Oceanography
FOS Earth and related environmental sciences
description Additional file 1: Figure S1. Genus-level composition based on analysis of 16S miTags. Abundant genera (the top 30 genera in terms of maximum relative abundance) are shown with all other genera grouped together as ‘Minor or unclassified’. The four groups: Arctic-Surface (0-100 m), Arctic-Deep (200-4000 m), Antarctic-Surface (0-100 m), and Antarctic-Deep (200-4000 m). Figure S2. Taxonomic distribution of the 214 MAGs recovered from the polar metagenomes. All the MAGs have 80% or higher completeness. Figure S3. Comparison between the Arctic and Antarctic microbiomes. A Venn diagram showing the distribution of OTUs across the Arctic and the Antarctic miTags. Only OTUs with more than 2 miTag numbers are included for analysis. B BLASTp searching Antarctic orthologs using the Arctic orthologs as queries. C BLASTp searching Arctic orthologs using the Antarctic orthologs as queries. Orthologs of lower than 40% similarity or higher than 1e-7 e-value were considered as ‘specific’. Figure S4. Functions enriched in the ...
format Text
author Cao, Shunan
Zhang, Weipeng
Ding, Wei
Wang, Meng
Fan, Shen
Yang, Bo
Mcminn, Andrew
Wang, Min
Xie, Bin-bin
Qin, Qi-Long
Chen, Xiu-Lan
He, Jianfeng
Zhang, Yu-Zhong
author_facet Cao, Shunan
Zhang, Weipeng
Ding, Wei
Wang, Meng
Fan, Shen
Yang, Bo
Mcminn, Andrew
Wang, Min
Xie, Bin-bin
Qin, Qi-Long
Chen, Xiu-Lan
He, Jianfeng
Zhang, Yu-Zhong
author_sort Cao, Shunan
title Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
title_short Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
title_full Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
title_fullStr Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
title_full_unstemmed Additional file 1 of Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics ...
title_sort additional file 1 of structure and function of the arctic and antarctic marine microbiota as revealed by metagenomics ...
publisher figshare
publishDate 2020
url https://dx.doi.org/10.6084/m9.figshare.12072561.v1
https://springernature.figshare.com/articles/journal_contribution/Additional_file_1_of_Structure_and_function_of_the_Arctic_and_Antarctic_marine_microbiota_as_revealed_by_metagenomics/12072561/1
long_lat ENVELOPE(9.281,9.281,63.350,63.350)
geographic Antarctic
Arctic
The Antarctic
Venn
geographic_facet Antarctic
Arctic
The Antarctic
Venn
genre Antarc*
Antarctic
Arctic
genre_facet Antarc*
Antarctic
Arctic
op_relation https://dx.doi.org/10.6084/m9.figshare.12072561
https://dx.doi.org/10.1186/s40168-020-00826-9
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.6084/m9.figshare.12072561.v110.6084/m9.figshare.1207256110.1186/s40168-020-00826-9
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