MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome

Additional file 5. List of DEGs specifics to the RF48 oyster family. This table presents the Log2 fold change of each CGI differentially expressed (significant) only in the the RF48 oyster family compared to the three susceptible families (SF11, SF14 and SF15), the Blast results, the enriched functi...

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Main Authors: Lorgeril, Julien, Petton, Bruno, Lucasson, Aude, Perez, Valérie, Pierre-Louis Stenger, Dégremont, Lionel, Montagnani, Caroline, Jean-Michel Escoubas, Haffner, Philippe, Jean-François Allienne, Leroy, Marc, Lagarde, Franck, Vidal-Dupiol, Jérémie, Gueguen, Yannick, Mitta, Guillaume
Format: Dataset
Language:unknown
Published: figshare 2020
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.11665074
https://springernature.figshare.com/articles/MOESM5_of_Differential_basal_expression_of_immune_genes_confers_Crassostrea_gigas_resistance_to_Pacific_oyster_mortality_syndrome/11665074
id ftdatacite:10.6084/m9.figshare.11665074
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.11665074 2023-05-15T15:58:09+02:00 MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome Lorgeril, Julien Petton, Bruno Lucasson, Aude Perez, Valérie Pierre-Louis Stenger Dégremont, Lionel Montagnani, Caroline Jean-Michel Escoubas Haffner, Philippe Jean-François Allienne Leroy, Marc Lagarde, Franck Vidal-Dupiol, Jérémie Gueguen, Yannick Mitta, Guillaume 2020 https://dx.doi.org/10.6084/m9.figshare.11665074 https://springernature.figshare.com/articles/MOESM5_of_Differential_basal_expression_of_immune_genes_confers_Crassostrea_gigas_resistance_to_Pacific_oyster_mortality_syndrome/11665074 unknown figshare https://dx.doi.org/10.1186/s12864-020-6471-x Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Biochemistry Genetics FOS Biological sciences Molecular Biology Physiology Evolutionary Biology Ecology Sociology FOS Sociology 69999 Biological Sciences not elsewhere classified Inorganic Chemistry FOS Chemical sciences dataset Dataset 2020 ftdatacite https://doi.org/10.6084/m9.figshare.11665074 https://doi.org/10.1186/s12864-020-6471-x 2021-11-05T12:55:41Z Additional file 5. List of DEGs specifics to the RF48 oyster family. This table presents the Log2 fold change of each CGI differentially expressed (significant) only in the the RF48 oyster family compared to the three susceptible families (SF11, SF14 and SF15), the Blast results, the enriched functional categories and details of each comparison (Log2 fold change, p-value, GO categories and number of reads). Dataset Crassostrea gigas Pacific oyster DataCite Metadata Store (German National Library of Science and Technology) Pacific
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biochemistry
Genetics
FOS Biological sciences
Molecular Biology
Physiology
Evolutionary Biology
Ecology
Sociology
FOS Sociology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
spellingShingle Biochemistry
Genetics
FOS Biological sciences
Molecular Biology
Physiology
Evolutionary Biology
Ecology
Sociology
FOS Sociology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
Lorgeril, Julien
Petton, Bruno
Lucasson, Aude
Perez, Valérie
Pierre-Louis Stenger
Dégremont, Lionel
Montagnani, Caroline
Jean-Michel Escoubas
Haffner, Philippe
Jean-François Allienne
Leroy, Marc
Lagarde, Franck
Vidal-Dupiol, Jérémie
Gueguen, Yannick
Mitta, Guillaume
MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome
topic_facet Biochemistry
Genetics
FOS Biological sciences
Molecular Biology
Physiology
Evolutionary Biology
Ecology
Sociology
FOS Sociology
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
description Additional file 5. List of DEGs specifics to the RF48 oyster family. This table presents the Log2 fold change of each CGI differentially expressed (significant) only in the the RF48 oyster family compared to the three susceptible families (SF11, SF14 and SF15), the Blast results, the enriched functional categories and details of each comparison (Log2 fold change, p-value, GO categories and number of reads).
format Dataset
author Lorgeril, Julien
Petton, Bruno
Lucasson, Aude
Perez, Valérie
Pierre-Louis Stenger
Dégremont, Lionel
Montagnani, Caroline
Jean-Michel Escoubas
Haffner, Philippe
Jean-François Allienne
Leroy, Marc
Lagarde, Franck
Vidal-Dupiol, Jérémie
Gueguen, Yannick
Mitta, Guillaume
author_facet Lorgeril, Julien
Petton, Bruno
Lucasson, Aude
Perez, Valérie
Pierre-Louis Stenger
Dégremont, Lionel
Montagnani, Caroline
Jean-Michel Escoubas
Haffner, Philippe
Jean-François Allienne
Leroy, Marc
Lagarde, Franck
Vidal-Dupiol, Jérémie
Gueguen, Yannick
Mitta, Guillaume
author_sort Lorgeril, Julien
title MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome
title_short MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome
title_full MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome
title_fullStr MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome
title_full_unstemmed MOESM5 of Differential basal expression of immune genes confers Crassostrea gigas resistance to Pacific oyster mortality syndrome
title_sort moesm5 of differential basal expression of immune genes confers crassostrea gigas resistance to pacific oyster mortality syndrome
publisher figshare
publishDate 2020
url https://dx.doi.org/10.6084/m9.figshare.11665074
https://springernature.figshare.com/articles/MOESM5_of_Differential_basal_expression_of_immune_genes_confers_Crassostrea_gigas_resistance_to_Pacific_oyster_mortality_syndrome/11665074
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_relation https://dx.doi.org/10.1186/s12864-020-6471-x
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.11665074
https://doi.org/10.1186/s12864-020-6471-x
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