Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity

During a research cruise in 2016, we isolated fungi from sediments, seawater, driftwood, fruiting bodies, and macroalgae using three different media to assess species richness and potential bioactivity of cultivable marine fungi in the High Arctic region. Ten stations from the Svalbard archipelago (...

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Main Authors: Hagestad, Ole Christian, Andersen, Jeanette H., Altermark, Bjørn, Hansen, Espen, Rämä, Teppo
Format: Dataset
Language:unknown
Published: Taylor & Francis 2019
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.11468109.v1
https://tandf.figshare.com/articles/dataset/Cultivable_marine_fungi_from_the_Arctic_Archipelago_of_Svalbard_and_their_antibacterial_activity/11468109/1
id ftdatacite:10.6084/m9.figshare.11468109.v1
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.11468109.v1 2023-05-15T14:28:54+02:00 Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity Hagestad, Ole Christian Andersen, Jeanette H. Altermark, Bjørn Hansen, Espen Rämä, Teppo 2019 https://dx.doi.org/10.6084/m9.figshare.11468109.v1 https://tandf.figshare.com/articles/dataset/Cultivable_marine_fungi_from_the_Arctic_Archipelago_of_Svalbard_and_their_antibacterial_activity/11468109/1 unknown Taylor & Francis https://dx.doi.org/10.1080/21501203.2019.1708492 https://dx.doi.org/10.6084/m9.figshare.11468109 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Microbiology FOS Biological sciences Molecular Biology 59999 Environmental Sciences not elsewhere classified FOS Earth and related environmental sciences Ecology Immunology FOS Clinical medicine 69999 Biological Sciences not elsewhere classified Inorganic Chemistry FOS Chemical sciences dataset Dataset 2019 ftdatacite https://doi.org/10.6084/m9.figshare.11468109.v1 https://doi.org/10.1080/21501203.2019.1708492 https://doi.org/10.6084/m9.figshare.11468109 2021-11-05T12:55:41Z During a research cruise in 2016, we isolated fungi from sediments, seawater, driftwood, fruiting bodies, and macroalgae using three different media to assess species richness and potential bioactivity of cultivable marine fungi in the High Arctic region. Ten stations from the Svalbard archipelago (73–80 °N, 18–31 °E) were investigated and 33 fungal isolates were obtained. These grouped into 22 operational taxonomic units (OTUs) using nuc rDNA internal transcribed spacer regions (ITS1-5.8S-ITS2 = ITS) with acut-off set at 98% similarity. The taxonomic analysis showed that 17 OTUs belonged to Ascomycota, one to Basidiomycota, two to Mucoromycota and two were fungal-like organisms. The nuc rDNA V1-V5 regions of 18S (18S) and D1-D3 regions of 28S (28S) were sequenced from representative isolates of each OTU for comparison to GenBank sequences. Isolates of Lulworthiales and Eurotiales were the most abundant, with seven isolates each. Among the 22 OTUs, nine represent potentially undescribed species based on low similarity to GenBank sequences and 10 isolates showed inhibitory activity against Gram-positive bacteria in an agar diffusion plug assay. These results show promise for the Arctic region as asource of novel marine fungi with the ability to produce bioactive secondary metabolites with antibacterial properties. Dataset Arctic Archipelago Arctic Svalbard DataCite Metadata Store (German National Library of Science and Technology) Arctic Svalbard Svalbard Archipelago
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Microbiology
FOS Biological sciences
Molecular Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
spellingShingle Microbiology
FOS Biological sciences
Molecular Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
Hagestad, Ole Christian
Andersen, Jeanette H.
Altermark, Bjørn
Hansen, Espen
Rämä, Teppo
Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity
topic_facet Microbiology
FOS Biological sciences
Molecular Biology
59999 Environmental Sciences not elsewhere classified
FOS Earth and related environmental sciences
Ecology
Immunology
FOS Clinical medicine
69999 Biological Sciences not elsewhere classified
Inorganic Chemistry
FOS Chemical sciences
description During a research cruise in 2016, we isolated fungi from sediments, seawater, driftwood, fruiting bodies, and macroalgae using three different media to assess species richness and potential bioactivity of cultivable marine fungi in the High Arctic region. Ten stations from the Svalbard archipelago (73–80 °N, 18–31 °E) were investigated and 33 fungal isolates were obtained. These grouped into 22 operational taxonomic units (OTUs) using nuc rDNA internal transcribed spacer regions (ITS1-5.8S-ITS2 = ITS) with acut-off set at 98% similarity. The taxonomic analysis showed that 17 OTUs belonged to Ascomycota, one to Basidiomycota, two to Mucoromycota and two were fungal-like organisms. The nuc rDNA V1-V5 regions of 18S (18S) and D1-D3 regions of 28S (28S) were sequenced from representative isolates of each OTU for comparison to GenBank sequences. Isolates of Lulworthiales and Eurotiales were the most abundant, with seven isolates each. Among the 22 OTUs, nine represent potentially undescribed species based on low similarity to GenBank sequences and 10 isolates showed inhibitory activity against Gram-positive bacteria in an agar diffusion plug assay. These results show promise for the Arctic region as asource of novel marine fungi with the ability to produce bioactive secondary metabolites with antibacterial properties.
format Dataset
author Hagestad, Ole Christian
Andersen, Jeanette H.
Altermark, Bjørn
Hansen, Espen
Rämä, Teppo
author_facet Hagestad, Ole Christian
Andersen, Jeanette H.
Altermark, Bjørn
Hansen, Espen
Rämä, Teppo
author_sort Hagestad, Ole Christian
title Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity
title_short Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity
title_full Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity
title_fullStr Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity
title_full_unstemmed Cultivable marine fungi from the Arctic Archipelago of Svalbard and their antibacterial activity
title_sort cultivable marine fungi from the arctic archipelago of svalbard and their antibacterial activity
publisher Taylor & Francis
publishDate 2019
url https://dx.doi.org/10.6084/m9.figshare.11468109.v1
https://tandf.figshare.com/articles/dataset/Cultivable_marine_fungi_from_the_Arctic_Archipelago_of_Svalbard_and_their_antibacterial_activity/11468109/1
geographic Arctic
Svalbard
Svalbard Archipelago
geographic_facet Arctic
Svalbard
Svalbard Archipelago
genre Arctic Archipelago
Arctic
Svalbard
genre_facet Arctic Archipelago
Arctic
Svalbard
op_relation https://dx.doi.org/10.1080/21501203.2019.1708492
https://dx.doi.org/10.6084/m9.figshare.11468109
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.11468109.v1
https://doi.org/10.1080/21501203.2019.1708492
https://doi.org/10.6084/m9.figshare.11468109
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