Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season

Figure 3. Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season. The upper panel shows NH 4 + concentrations (μmol l −1 ) and the relative abundance of Caulobacter (based on microarray hybridization intensity). The lower panel shows nitrate, nitr...

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Main Authors: Larose, Catherine, Dommergue, Aurélien, Vogel, Timothy M
Format: Still Image
Language:unknown
Published: IOP Publishing 2013
Subjects:
Online Access:https://dx.doi.org/10.6084/m9.figshare.1011671
https://iop.figshare.com/articles/figure/_Relationship_between_nitrogen_species_and_some_microorganisms_in_the_basal_snow_throughout_the_fiel/1011671
id ftdatacite:10.6084/m9.figshare.1011671
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spelling ftdatacite:10.6084/m9.figshare.1011671 2023-05-15T14:59:57+02:00 Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season Larose, Catherine Dommergue, Aurélien Vogel, Timothy M 2013 https://dx.doi.org/10.6084/m9.figshare.1011671 https://iop.figshare.com/articles/figure/_Relationship_between_nitrogen_species_and_some_microorganisms_in_the_basal_snow_throughout_the_fiel/1011671 unknown IOP Publishing Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Environmental Science Image Figure graphic ImageObject 2013 ftdatacite https://doi.org/10.6084/m9.figshare.1011671 2021-11-05T12:55:41Z Figure 3. Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season. The upper panel shows NH 4 + concentrations (μmol l −1 ) and the relative abundance of Caulobacter (based on microarray hybridization intensity). The lower panel shows nitrate, nitrite concentrations (μmol l −1 ) and the relative abundance of Roseomonas and Bacillus (based on microarray hybridization intensity). Abstract Arctic snowpacks are often considered as chemical reactors for a variety of chemicals deposited through wet and dry events, but are overlooked as potential sites for microbial metabolism of reactive nitrogen species. The fate of deposited species is critical since warming leads to the transfer of contaminants to snowmelt-fed ecosystems. Here, we examined the role of microorganisms and the potential pathways involved in nitrogen cycling in the snow. Next generation sequencing data were used to follow functional gene abundances and a 16S rRNA (ribosomal ribonucleic acid) gene microarray was used to follow shifts in microbial community structure during a two-month spring-time field study at a high Arctic site, Svalbard, Norway (79° N). We showed that despite the low temperatures and limited water supply, microbial communities inhabiting the snow cover demonstrated dynamic shifts in their functional potential to follow several different pathways of the nitrogen cycle. In addition, microbial specific phylogenetic probes tracked different nitrogen species over time. For example, probes for Roseomonas tracked nitrate concentrations closely and probes for Caulobacter tracked ammonium concentrations after a delay of one week. Nitrogen cycling was also shown to be a dominant process at the base of the snowpack. Still Image Arctic Svalbard DataCite Metadata Store (German National Library of Science and Technology) Arctic Norway Svalbard
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Environmental Science
spellingShingle Environmental Science
Larose, Catherine
Dommergue, Aurélien
Vogel, Timothy M
Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
topic_facet Environmental Science
description Figure 3. Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season. The upper panel shows NH 4 + concentrations (μmol l −1 ) and the relative abundance of Caulobacter (based on microarray hybridization intensity). The lower panel shows nitrate, nitrite concentrations (μmol l −1 ) and the relative abundance of Roseomonas and Bacillus (based on microarray hybridization intensity). Abstract Arctic snowpacks are often considered as chemical reactors for a variety of chemicals deposited through wet and dry events, but are overlooked as potential sites for microbial metabolism of reactive nitrogen species. The fate of deposited species is critical since warming leads to the transfer of contaminants to snowmelt-fed ecosystems. Here, we examined the role of microorganisms and the potential pathways involved in nitrogen cycling in the snow. Next generation sequencing data were used to follow functional gene abundances and a 16S rRNA (ribosomal ribonucleic acid) gene microarray was used to follow shifts in microbial community structure during a two-month spring-time field study at a high Arctic site, Svalbard, Norway (79° N). We showed that despite the low temperatures and limited water supply, microbial communities inhabiting the snow cover demonstrated dynamic shifts in their functional potential to follow several different pathways of the nitrogen cycle. In addition, microbial specific phylogenetic probes tracked different nitrogen species over time. For example, probes for Roseomonas tracked nitrate concentrations closely and probes for Caulobacter tracked ammonium concentrations after a delay of one week. Nitrogen cycling was also shown to be a dominant process at the base of the snowpack.
format Still Image
author Larose, Catherine
Dommergue, Aurélien
Vogel, Timothy M
author_facet Larose, Catherine
Dommergue, Aurélien
Vogel, Timothy M
author_sort Larose, Catherine
title Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
title_short Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
title_full Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
title_fullStr Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
title_full_unstemmed Relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
title_sort relationship between nitrogen species and some microorganisms in the basal snow throughout the field season
publisher IOP Publishing
publishDate 2013
url https://dx.doi.org/10.6084/m9.figshare.1011671
https://iop.figshare.com/articles/figure/_Relationship_between_nitrogen_species_and_some_microorganisms_in_the_basal_snow_throughout_the_fiel/1011671
geographic Arctic
Norway
Svalbard
geographic_facet Arctic
Norway
Svalbard
genre Arctic
Svalbard
genre_facet Arctic
Svalbard
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.1011671
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