MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations

Additional file 1: Figure S1. Patterns of coancestry ( $$f$$ f ) in all chromosomes (except 1, 2, 7 and 12) for the CC, NEAC, CC × NEAC and $$ f_{{{\text{CC}}\;{\&}\;NEAC}} $$ f CC & N E A C populations. The data provided represent values of coancestry smoothed by using a sliding window appr...

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Main Authors: Rodríguez-Ramilo, Silvia, Baranski, Matthew, Moghadam, Hooman, Grove, Harald, Lien, Sigbjørn, Goddard, Mike, Meuwissen, Theo, Sonesson, Anna
Format: Text
Language:unknown
Published: figshare 2019
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Online Access:https://dx.doi.org/10.6084/m9.figshare.10087148
https://springernature.figshare.com/articles/MOESM1_of_Strong_selection_pressures_maintain_divergence_on_genomic_islands_in_Atlantic_cod_Gadus_morhua_L_populations/10087148
id ftdatacite:10.6084/m9.figshare.10087148
record_format openpolar
spelling ftdatacite:10.6084/m9.figshare.10087148 2023-05-15T15:27:32+02:00 MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations Rodríguez-Ramilo, Silvia Baranski, Matthew Moghadam, Hooman Grove, Harald Lien, Sigbjørn Goddard, Mike Meuwissen, Theo Sonesson, Anna 2019 https://dx.doi.org/10.6084/m9.figshare.10087148 https://springernature.figshare.com/articles/MOESM1_of_Strong_selection_pressures_maintain_divergence_on_genomic_islands_in_Atlantic_cod_Gadus_morhua_L_populations/10087148 unknown figshare https://dx.doi.org/10.1186/s12711-019-0503-5 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Microbiology FOS Biological sciences Genetics Molecular Biology Evolutionary Biology Ecology 69999 Biological Sciences not elsewhere classified Hematology 110309 Infectious Diseases FOS Health sciences Plant Biology Computational Biology Text article-journal Journal contribution ScholarlyArticle 2019 ftdatacite https://doi.org/10.6084/m9.figshare.10087148 https://doi.org/10.1186/s12711-019-0503-5 2021-11-05T12:55:41Z Additional file 1: Figure S1. Patterns of coancestry ( $$f$$ f ) in all chromosomes (except 1, 2, 7 and 12) for the CC, NEAC, CC × NEAC and $$ f_{{{\text{CC}}\;{\&}\;NEAC}} $$ f CC & N E A C populations. The data provided represent values of coancestry smoothed by using a sliding window approach. Figure S2. Genetic differentiation coefficients ( $$F$$ F ST) between populations CC and NEAC in all chromosomes (except 1, 2, 7 and 12). The showed values are genetic differentiation coefficients smoothed by using a sliding window approach. Figure S3. Private allele frequency in populations CC (left column) and NEAC (right column) in all chromosomes (except 1, 2, 7 and 12). A sliding window approach was used to smooth the private allele frequency. Figure S4. Principal components analysis in populations CC and NEAC in all chromosomes (except 1, 2, 7 and 12). First two principal components on the SNP data available. Text atlantic cod Gadus morhua DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Evolutionary Biology
Ecology
69999 Biological Sciences not elsewhere classified
Hematology
110309 Infectious Diseases
FOS Health sciences
Plant Biology
Computational Biology
spellingShingle Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Evolutionary Biology
Ecology
69999 Biological Sciences not elsewhere classified
Hematology
110309 Infectious Diseases
FOS Health sciences
Plant Biology
Computational Biology
Rodríguez-Ramilo, Silvia
Baranski, Matthew
Moghadam, Hooman
Grove, Harald
Lien, Sigbjørn
Goddard, Mike
Meuwissen, Theo
Sonesson, Anna
MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations
topic_facet Microbiology
FOS Biological sciences
Genetics
Molecular Biology
Evolutionary Biology
Ecology
69999 Biological Sciences not elsewhere classified
Hematology
110309 Infectious Diseases
FOS Health sciences
Plant Biology
Computational Biology
description Additional file 1: Figure S1. Patterns of coancestry ( $$f$$ f ) in all chromosomes (except 1, 2, 7 and 12) for the CC, NEAC, CC × NEAC and $$ f_{{{\text{CC}}\;{\&}\;NEAC}} $$ f CC & N E A C populations. The data provided represent values of coancestry smoothed by using a sliding window approach. Figure S2. Genetic differentiation coefficients ( $$F$$ F ST) between populations CC and NEAC in all chromosomes (except 1, 2, 7 and 12). The showed values are genetic differentiation coefficients smoothed by using a sliding window approach. Figure S3. Private allele frequency in populations CC (left column) and NEAC (right column) in all chromosomes (except 1, 2, 7 and 12). A sliding window approach was used to smooth the private allele frequency. Figure S4. Principal components analysis in populations CC and NEAC in all chromosomes (except 1, 2, 7 and 12). First two principal components on the SNP data available.
format Text
author Rodríguez-Ramilo, Silvia
Baranski, Matthew
Moghadam, Hooman
Grove, Harald
Lien, Sigbjørn
Goddard, Mike
Meuwissen, Theo
Sonesson, Anna
author_facet Rodríguez-Ramilo, Silvia
Baranski, Matthew
Moghadam, Hooman
Grove, Harald
Lien, Sigbjørn
Goddard, Mike
Meuwissen, Theo
Sonesson, Anna
author_sort Rodríguez-Ramilo, Silvia
title MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations
title_short MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations
title_full MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations
title_fullStr MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations
title_full_unstemmed MOESM1 of Strong selection pressures maintain divergence on genomic islands in Atlantic cod (Gadus morhua L.) populations
title_sort moesm1 of strong selection pressures maintain divergence on genomic islands in atlantic cod (gadus morhua l.) populations
publisher figshare
publishDate 2019
url https://dx.doi.org/10.6084/m9.figshare.10087148
https://springernature.figshare.com/articles/MOESM1_of_Strong_selection_pressures_maintain_divergence_on_genomic_islands_in_Atlantic_cod_Gadus_morhua_L_populations/10087148
genre atlantic cod
Gadus morhua
genre_facet atlantic cod
Gadus morhua
op_relation https://dx.doi.org/10.1186/s12711-019-0503-5
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.10087148
https://doi.org/10.1186/s12711-019-0503-5
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