Genomic data from Little blue penguin ( Eudyptula minor minor ).

The New Zealand little blue penguin (also known as fairy penguin, blue penguin, little penguin and kororā in Māori) is one of the smallest penguins. It is found on the coastlines of New Zealand and the Chatham Islands. They have a slate-blue plumage. Recent genetic, morphological and behavioral rese...

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Main Authors: Alan, D Tennyson J, Andrew, Reeve Hart, McKinlay Bruce, Charles-André, Bost, Chengran, Zhou, Daniel, Ksepka T, Thompson R David, David, Houston M, De, Zhang Xing, Emily, Kay, Miller Gary, George, Pacheco, Guojie, Zhang, Hailin, Pan, Helen, Taylor, Bouzat L Juan, Juan, Masello F, Kathryn, Johnson, Kim, Labuschagne, Lara, Shepherd D, Lisa, Nupen J, Argilla S Lisa, Mads, Bertelsen F, Ellegaard R Martin, Melanie, Young J, Miaoquan, Fang, Mikkel-Holger, Sinding S, M.Thomas, Gilbert P, Boersma Dee P, Pablo, García Borboroglu, Patricia, Parker, Pauline, Howard, Dann Peter, Peter, Ryan G, Petra, Quillfeldt, Phillips A Richard, Grosser Stefanie, Steven, Fiddaman R, Theresa, Cole, Thomas, Mattern, Stracke Thomas, Tom, Hart, Ursula, Ellenberg, Xupeng, Bi, Yves, Cherel, Zhengtao, Yang
Format: Dataset
Language:English
Published: GigaScience Database 2019
Subjects:
Online Access:https://dx.doi.org/10.5524/102178
http://gigadb.org/dataset/102178
id ftdatacite:10.5524/102178
record_format openpolar
spelling ftdatacite:10.5524/102178 2023-05-15T14:05:20+02:00 Genomic data from Little blue penguin ( Eudyptula minor minor ). Alan, D Tennyson J Andrew, Reeve Hart McKinlay Bruce Charles-André, Bost Chengran, Zhou Daniel, Ksepka T Thompson R David David, Houston M De, Zhang Xing Emily, Kay Miller Gary George, Pacheco Guojie, Zhang Hailin, Pan Helen, Taylor Bouzat L Juan Juan, Masello F Kathryn, Johnson Kim, Labuschagne Lara, Shepherd D Lisa, Nupen J Argilla S Lisa Mads, Bertelsen F Ellegaard R Martin Melanie, Young J Miaoquan, Fang Mikkel-Holger, Sinding S M.Thomas, Gilbert P Boersma Dee P Pablo, García Borboroglu Patricia, Parker Pauline, Howard Dann Peter Peter, Ryan G Petra, Quillfeldt Phillips A Richard Grosser Stefanie Steven, Fiddaman R Theresa, Cole Thomas, Mattern Stracke Thomas Tom, Hart Ursula, Ellenberg Xupeng, Bi Yves, Cherel Zhengtao, Yang 2019 https://dx.doi.org/10.5524/102178 http://gigadb.org/dataset/102178 en eng GigaScience Database https://dx.doi.org/100649 CC0 1.0 Universal http://creativecommons.org/publicdomain/zero/1.0 CC0 Genomic genomics sphenisciformes comparative evolution phylogenetics speciation biogeography demography climate change antarctica evolution dataset Dataset GigaDB Dataset 2019 ftdatacite https://doi.org/10.5524/102178 https://doi.org/100649 2021-11-05T12:55:41Z The New Zealand little blue penguin (also known as fairy penguin, blue penguin, little penguin and kororā in Māori) is one of the smallest penguins. It is found on the coastlines of New Zealand and the Chatham Islands. They have a slate-blue plumage. Recent genetic, morphological and behavioral research has demonstrated that the New Zealand little blue penguin is a seperate species to the Australian fairy penguin, however this still remains controversial. Populations have recently declined, and they are considered as Least Concern by the International Union for Conservation of Nature (IUCN), however this assessment still classifies the Australian and New Zealand species as conspecific. The New Zealand little penguin is a Taonga, or treasured possession in Māori culture. We sequenced the genome of an adult Little blue penguin from National Aquarium of New Zealand, New Zealand North Island (provided by Helen Taylor) to a depth of approximately 87x with short reads from a series of libraries with various insert sizes (250bp-20Kb). The assembled scaffolds of high quality sequences total 1.3Gb, with the contig and scaffold N50 values of 86.12Kb and 20.15Mb respectively. We identified 17802 protein-coding genes. Dataset Antarc* Antarctica DataCite Metadata Store (German National Library of Science and Technology) New Zealand
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Genomic
genomics
sphenisciformes
comparative evolution
phylogenetics
speciation
biogeography
demography
climate change
antarctica
evolution
spellingShingle Genomic
genomics
sphenisciformes
comparative evolution
phylogenetics
speciation
biogeography
demography
climate change
antarctica
evolution
Alan, D Tennyson J
Andrew, Reeve Hart
McKinlay Bruce
Charles-André, Bost
Chengran, Zhou
Daniel, Ksepka T
Thompson R David
David, Houston M
De, Zhang Xing
Emily, Kay
Miller Gary
George, Pacheco
Guojie, Zhang
Hailin, Pan
Helen, Taylor
Bouzat L Juan
Juan, Masello F
Kathryn, Johnson
Kim, Labuschagne
Lara, Shepherd D
Lisa, Nupen J
Argilla S Lisa
Mads, Bertelsen F
Ellegaard R Martin
Melanie, Young J
Miaoquan, Fang
Mikkel-Holger, Sinding S
M.Thomas, Gilbert P
Boersma Dee P
Pablo, García Borboroglu
Patricia, Parker
Pauline, Howard
Dann Peter
Peter, Ryan G
Petra, Quillfeldt
Phillips A Richard
Grosser Stefanie
Steven, Fiddaman R
Theresa, Cole
Thomas, Mattern
Stracke Thomas
Tom, Hart
Ursula, Ellenberg
Xupeng, Bi
Yves, Cherel
Zhengtao, Yang
Genomic data from Little blue penguin ( Eudyptula minor minor ).
topic_facet Genomic
genomics
sphenisciformes
comparative evolution
phylogenetics
speciation
biogeography
demography
climate change
antarctica
evolution
description The New Zealand little blue penguin (also known as fairy penguin, blue penguin, little penguin and kororā in Māori) is one of the smallest penguins. It is found on the coastlines of New Zealand and the Chatham Islands. They have a slate-blue plumage. Recent genetic, morphological and behavioral research has demonstrated that the New Zealand little blue penguin is a seperate species to the Australian fairy penguin, however this still remains controversial. Populations have recently declined, and they are considered as Least Concern by the International Union for Conservation of Nature (IUCN), however this assessment still classifies the Australian and New Zealand species as conspecific. The New Zealand little penguin is a Taonga, or treasured possession in Māori culture. We sequenced the genome of an adult Little blue penguin from National Aquarium of New Zealand, New Zealand North Island (provided by Helen Taylor) to a depth of approximately 87x with short reads from a series of libraries with various insert sizes (250bp-20Kb). The assembled scaffolds of high quality sequences total 1.3Gb, with the contig and scaffold N50 values of 86.12Kb and 20.15Mb respectively. We identified 17802 protein-coding genes.
format Dataset
author Alan, D Tennyson J
Andrew, Reeve Hart
McKinlay Bruce
Charles-André, Bost
Chengran, Zhou
Daniel, Ksepka T
Thompson R David
David, Houston M
De, Zhang Xing
Emily, Kay
Miller Gary
George, Pacheco
Guojie, Zhang
Hailin, Pan
Helen, Taylor
Bouzat L Juan
Juan, Masello F
Kathryn, Johnson
Kim, Labuschagne
Lara, Shepherd D
Lisa, Nupen J
Argilla S Lisa
Mads, Bertelsen F
Ellegaard R Martin
Melanie, Young J
Miaoquan, Fang
Mikkel-Holger, Sinding S
M.Thomas, Gilbert P
Boersma Dee P
Pablo, García Borboroglu
Patricia, Parker
Pauline, Howard
Dann Peter
Peter, Ryan G
Petra, Quillfeldt
Phillips A Richard
Grosser Stefanie
Steven, Fiddaman R
Theresa, Cole
Thomas, Mattern
Stracke Thomas
Tom, Hart
Ursula, Ellenberg
Xupeng, Bi
Yves, Cherel
Zhengtao, Yang
author_facet Alan, D Tennyson J
Andrew, Reeve Hart
McKinlay Bruce
Charles-André, Bost
Chengran, Zhou
Daniel, Ksepka T
Thompson R David
David, Houston M
De, Zhang Xing
Emily, Kay
Miller Gary
George, Pacheco
Guojie, Zhang
Hailin, Pan
Helen, Taylor
Bouzat L Juan
Juan, Masello F
Kathryn, Johnson
Kim, Labuschagne
Lara, Shepherd D
Lisa, Nupen J
Argilla S Lisa
Mads, Bertelsen F
Ellegaard R Martin
Melanie, Young J
Miaoquan, Fang
Mikkel-Holger, Sinding S
M.Thomas, Gilbert P
Boersma Dee P
Pablo, García Borboroglu
Patricia, Parker
Pauline, Howard
Dann Peter
Peter, Ryan G
Petra, Quillfeldt
Phillips A Richard
Grosser Stefanie
Steven, Fiddaman R
Theresa, Cole
Thomas, Mattern
Stracke Thomas
Tom, Hart
Ursula, Ellenberg
Xupeng, Bi
Yves, Cherel
Zhengtao, Yang
author_sort Alan, D Tennyson J
title Genomic data from Little blue penguin ( Eudyptula minor minor ).
title_short Genomic data from Little blue penguin ( Eudyptula minor minor ).
title_full Genomic data from Little blue penguin ( Eudyptula minor minor ).
title_fullStr Genomic data from Little blue penguin ( Eudyptula minor minor ).
title_full_unstemmed Genomic data from Little blue penguin ( Eudyptula minor minor ).
title_sort genomic data from little blue penguin ( eudyptula minor minor ).
publisher GigaScience Database
publishDate 2019
url https://dx.doi.org/10.5524/102178
http://gigadb.org/dataset/102178
geographic New Zealand
geographic_facet New Zealand
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_relation https://dx.doi.org/100649
op_rights CC0 1.0 Universal
http://creativecommons.org/publicdomain/zero/1.0
op_rightsnorm CC0
op_doi https://doi.org/10.5524/102178
https://doi.org/100649
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