Genomic data from the peregrine falcon (Falco peregrinus)

The peregrine falcon (Falco peregrinus) is a top predator that has unique morphological, physiological and behavioural adaptations, allowing them to be successful hunters – it is also known as the world’s fastest animal. The peregrine falcon genome was sequenced to further understand the evolutionar...

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Main Authors: Zhan, X, Pan, S, Wang, J, Dixon, A, He, J, Muller, MG, Ni, P, Hu, L, Liu, Y, Hou, H, Chen, Y, Xia, J, Luo, Q, Xu, P, Liao, S, Cao, C, Gao, S, Wang, Z, Yue, Z, Li, G, Yin, Y, Fox, NC, Bruford, MW.
Format: Dataset
Language:English
Published: GigaScience Database 2014
Subjects:
Online Access:https://dx.doi.org/10.5524/101006
http://gigadb.org/dataset/101006
id ftdatacite:10.5524/101006
record_format openpolar
spelling ftdatacite:10.5524/101006 2023-05-15T16:09:51+02:00 Genomic data from the peregrine falcon (Falco peregrinus) Zhan, X Pan, S Wang, J Dixon, A He, J Muller, MG Ni, P Hu, L Liu, Y Hou, H Chen, Y Xia, J Luo, Q Xu, P Chen, Y Liao, S Cao, C Gao, S Wang, Z Yue, Z Li, G Yin, Y Fox, NC Wang, J Bruford, MW. 2014 https://dx.doi.org/10.5524/101006 http://gigadb.org/dataset/101006 en eng GigaScience Database https://dx.doi.org/10.1038/ng.2588 https://dx.doi.org/100075 Genomic dataset Dataset GigaDB Dataset 2014 ftdatacite https://doi.org/10.5524/101006 https://doi.org/10.1038/ng.2588 https://doi.org/100075 2021-11-05T12:55:41Z The peregrine falcon (Falco peregrinus) is a top predator that has unique morphological, physiological and behavioural adaptations, allowing them to be successful hunters – it is also known as the world’s fastest animal. The peregrine falcon genome was sequenced to further understand the evolutionary adaptation of this successful hunter. An Illumina HiSeq 2000 platform was used to generate a 128.07 Gb sequence and the initial genome size was estimated at 1.2 Gb, suggesting a genome coverage of 106.72×. SOAPdenovo was used for assembly and resulted in scaffold N50 and contig values of 3.89 Mb and 28.6 kb respectively. Fosmid-based Sanger sequencing confirmed >99% coverage of euchromatic DNA. This data provides insights into evolution of the peregrine’s predatory lifestyle. Dataset Falco peregrinus peregrine falcon DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Genomic
spellingShingle Genomic
Zhan, X
Pan, S
Wang, J
Dixon, A
He, J
Muller, MG
Ni, P
Hu, L
Liu, Y
Hou, H
Chen, Y
Xia, J
Luo, Q
Xu, P
Chen, Y
Liao, S
Cao, C
Gao, S
Wang, Z
Yue, Z
Li, G
Yin, Y
Fox, NC
Wang, J
Bruford, MW.
Genomic data from the peregrine falcon (Falco peregrinus)
topic_facet Genomic
description The peregrine falcon (Falco peregrinus) is a top predator that has unique morphological, physiological and behavioural adaptations, allowing them to be successful hunters – it is also known as the world’s fastest animal. The peregrine falcon genome was sequenced to further understand the evolutionary adaptation of this successful hunter. An Illumina HiSeq 2000 platform was used to generate a 128.07 Gb sequence and the initial genome size was estimated at 1.2 Gb, suggesting a genome coverage of 106.72×. SOAPdenovo was used for assembly and resulted in scaffold N50 and contig values of 3.89 Mb and 28.6 kb respectively. Fosmid-based Sanger sequencing confirmed >99% coverage of euchromatic DNA. This data provides insights into evolution of the peregrine’s predatory lifestyle.
format Dataset
author Zhan, X
Pan, S
Wang, J
Dixon, A
He, J
Muller, MG
Ni, P
Hu, L
Liu, Y
Hou, H
Chen, Y
Xia, J
Luo, Q
Xu, P
Chen, Y
Liao, S
Cao, C
Gao, S
Wang, Z
Yue, Z
Li, G
Yin, Y
Fox, NC
Wang, J
Bruford, MW.
author_facet Zhan, X
Pan, S
Wang, J
Dixon, A
He, J
Muller, MG
Ni, P
Hu, L
Liu, Y
Hou, H
Chen, Y
Xia, J
Luo, Q
Xu, P
Chen, Y
Liao, S
Cao, C
Gao, S
Wang, Z
Yue, Z
Li, G
Yin, Y
Fox, NC
Wang, J
Bruford, MW.
author_sort Zhan, X
title Genomic data from the peregrine falcon (Falco peregrinus)
title_short Genomic data from the peregrine falcon (Falco peregrinus)
title_full Genomic data from the peregrine falcon (Falco peregrinus)
title_fullStr Genomic data from the peregrine falcon (Falco peregrinus)
title_full_unstemmed Genomic data from the peregrine falcon (Falco peregrinus)
title_sort genomic data from the peregrine falcon (falco peregrinus)
publisher GigaScience Database
publishDate 2014
url https://dx.doi.org/10.5524/101006
http://gigadb.org/dataset/101006
genre Falco peregrinus
peregrine falcon
genre_facet Falco peregrinus
peregrine falcon
op_relation https://dx.doi.org/10.1038/ng.2588
https://dx.doi.org/100075
op_doi https://doi.org/10.5524/101006
https://doi.org/10.1038/ng.2588
https://doi.org/100075
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