Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.

Quantification of interactive effects of ocean warming and ocean acidification based on near-future climate change projections on morphometrics and oocyte size of benthic invertebrates (the bivalves Astarte crenata and Bathyarca glacialis) from the Western Barents Sea. Supported by The Changing Arct...

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Bibliographic Details
Main Authors: Reed, Adam, Godbold, Jasmin, Solan, Martin, Grange, Laura
Format: Dataset
Language:English
Published: NERC EDS UK Polar Data Centre 2021
Subjects:
Online Access:https://dx.doi.org/10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9
https://data.bas.ac.uk/full-record.php?id=GB/NERC/BAS/PDC/01563
id ftdatacite:10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic "EARTH SCIENCE","BIOSPHERE","ECOLOGICAL DYNAMICS","SPECIES/POPULATION INTERACTIONS","SPECIES LIFE HISTORY"
"EARTH SCIENCE","BIOLOGICAL CLASSIFICATION","ANIMALS/INVERTEBRATES"
spellingShingle "EARTH SCIENCE","BIOSPHERE","ECOLOGICAL DYNAMICS","SPECIES/POPULATION INTERACTIONS","SPECIES LIFE HISTORY"
"EARTH SCIENCE","BIOLOGICAL CLASSIFICATION","ANIMALS/INVERTEBRATES"
Reed, Adam
Godbold, Jasmin
Solan, Martin
Grange, Laura
Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.
topic_facet "EARTH SCIENCE","BIOSPHERE","ECOLOGICAL DYNAMICS","SPECIES/POPULATION INTERACTIONS","SPECIES LIFE HISTORY"
"EARTH SCIENCE","BIOLOGICAL CLASSIFICATION","ANIMALS/INVERTEBRATES"
description Quantification of interactive effects of ocean warming and ocean acidification based on near-future climate change projections on morphometrics and oocyte size of benthic invertebrates (the bivalves Astarte crenata and Bathyarca glacialis) from the Western Barents Sea. Supported by The Changing Arctic Ocean Seafloor (ChAOS) - how changing sea ice conditions impact biological communities, biogeochemical processes and ecosystems project (NE/N015894/1 and NE/P006426/1, 2017-2021), Natural Environment Research Council (NERC) in the UK. : Specimens were collected from each of 1 station in 2017 (B13) and 2 stations in 2018 (B16 and B17) during two consecutive cruises (RRS James Clark Ross: JR16006, 30th June to 8th August 2017; JR17007: 10th July to 5th August, 2018) following a transect along the 30°E meridian. At each station similar-sized specimens of the infaunal bivalves Astarte crenata and Bathyarca glacialis were obtained by Agassiz trawl. Surficial sediment <10 cm deep was collected using SMBA box cores, sieved to remove macrofauna (500 µm mesh), and homogenised by stirring. Both infaunal bivalves and sediment were maintained under aerated seawater and returned to the Biodiversity and Ecosystem Futures Facility, University of Southampton at ambient temperature (1.5 + 1°C). Ten centimetres of homogenised sediment were transferred to transparent acrylic aquaria (internal dimensions, LWH: 20 x 20 x 34 cm) and overlain with ~8 L (20cm depth) surface seawater (salinity, ~34). Aquaria were maintained in the dark at ambient conditions (1-2 °C and ~400 ppm [CO2]), and randomly distributed between two insulated fibreglass seawater baths (LWH: 1.2 x 1.2 x 0.8m, Tanks Direct, UK). Three B. glacialis were introduced to each of twelve aquaria (n = 36; ambient 18, future 18) and six A.crenata were introduced to each of ten aquaria (n = 60; 30 ambient, 30 future). After a 30-day acclimation period to aquarium conditions, temperature and [CO2] were manually adjusted (1 °C and ~100 ppm CO2 week -1) to achieve near-future treatment conditions (3-5 °C and ~550 ppm [CO2]). We periodically measured pH, temperature and salinity and total alkalinity. The bivalves were fed ad libitum three time per week (100 ml cultured live Isochrysis sp., Tetraselmis sp., and Phaeodactylum sp.), and overlying water exchanged weekly. Experiments were run for 120 days (B. glacialis, 21//11/2017-20/03/2018) or 135 days (A. crenata, 08/10/2018-19/02/2019) after which animals were removed and fixed in 4 neutral buffered formaldehyde. Morphology: Biometric measurements (maximum shell height, shell length, shell width and weight) were determined using a digital calliper (± 0.01mm), and bivalves within a specific size range selected for histological analyses (A. crenata 25-30 mm shell length - n = 37 [19 ambient, 18 future]; B. glacialis 20-25 mm shell length - n = 24 [12 ambient, 12 future]). N.B., Biometric measurements for all A. crenata (n = 59, including those selected for histological analyses,) less one damaged individual are contained in the attached spreadsheet (Astarte_Morphology.CSV file). However, owed to several individuals being pooled in sample jars at the end of the experiment, only biometric measurements for specimens that could be individually identified (and selected for histological analyses) are contained in the attached spreadsheet (Bathyarca_Morphology.CSV file). Oocyte size: Soft tissue of each specimen was processed using standard protocols for wax histology and stained using haematoxylin Z and the counterstain eosin. The oocyte size distribution of 100 oocytes per female was measured, where the size of each oocyte was standardised to the diameter of a circle with an equal aggregate cross-sectional area to the two-dimensional section of the imaged oocyte (i.e., Equivalent Circular Diameter (ECD)). N.B. Oocyte size (ECD) was only measured for females where oocytes were complete and/or present in a sufficient number (100+) to ensure robust quantitative analysis. The number of pixels equivalent to each ECD measurement (i.e., 'Pixel_diameter') is also indicated in the attached spreadsheets (Astarte_Oocyte_Size.CSV file and Bathyarca_Oocyte_Size.CSV file). Variability in the quality of tissue preservation rendered the oocytes of some females not measurable. Full descriptions and additional information provided in Reed et al. 2021 Frontiers in Marine Science in main manuscript and supplementary information. : Resolution: Biometric measurements (i.e., shell length, shell height and tumidity (width) to two decimal places. Wet weight to four decimal places. Oocyte Equivalent Circular Diameter to two decimal places. Instrumentation: Mettler-Toledo InLab Expert Pro temperature-pH combination electrode Mettler-Toledo InLab 737 IP67 temperature-conductivity combination electrode Digital vernier calliper Balance (+/-0.000g) Rotary microtome Nikon D5000 digital SLR camera Olympus BHS (BH-2) stereomicroscope : Standard protocols were followed and data entry double checked by independent person.
format Dataset
author Reed, Adam
Godbold, Jasmin
Solan, Martin
Grange, Laura
author_facet Reed, Adam
Godbold, Jasmin
Solan, Martin
Grange, Laura
author_sort Reed, Adam
title Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.
title_short Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.
title_full Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.
title_fullStr Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.
title_full_unstemmed Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions.
title_sort biometric and oocyte size measurements for the bivalves astarte crenata and bathyarca glacialis from the western barents sea under ambient and near-future climate change conditions.
publisher NERC EDS UK Polar Data Centre
publishDate 2021
url https://dx.doi.org/10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9
https://data.bas.ac.uk/full-record.php?id=GB/NERC/BAS/PDC/01563
long_lat ENVELOPE(-67.317,-67.317,-73.700,-73.700)
ENVELOPE(156.767,156.767,-80.217,-80.217)
geographic Arctic
Arctic Ocean
Barents Sea
Toledo
Olympus
geographic_facet Arctic
Arctic Ocean
Barents Sea
Toledo
Olympus
genre Arctic
Arctic
Arctic Ocean
Barents Sea
Climate change
Ocean acidification
Sea ice
genre_facet Arctic
Arctic
Arctic Ocean
Barents Sea
Climate change
Ocean acidification
Sea ice
op_relation https://www.changing-arctic-ocean.ac.uk/
https://www.bodc.ac.uk/resources/inventories/cruise_inventory/report/16774/
https://www.bodc.ac.uk/resources/inventories/cruise_inventory/report/16982/
op_rights Open Government Licence V3.0
http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/
op_doi https://doi.org/10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9
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spelling ftdatacite:10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9 2023-05-15T14:21:58+02:00 Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis from the Western Barents Sea under ambient and near-future climate change conditions. Reed, Adam Godbold, Jasmin Solan, Martin Grange, Laura 2021 text/csv https://dx.doi.org/10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9 https://data.bas.ac.uk/full-record.php?id=GB/NERC/BAS/PDC/01563 en eng NERC EDS UK Polar Data Centre https://www.changing-arctic-ocean.ac.uk/ https://www.bodc.ac.uk/resources/inventories/cruise_inventory/report/16774/ https://www.bodc.ac.uk/resources/inventories/cruise_inventory/report/16982/ Open Government Licence V3.0 http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/ "EARTH SCIENCE","BIOSPHERE","ECOLOGICAL DYNAMICS","SPECIES/POPULATION INTERACTIONS","SPECIES LIFE HISTORY" "EARTH SCIENCE","BIOLOGICAL CLASSIFICATION","ANIMALS/INVERTEBRATES" Biometric and oocyte size measurements for the bivalves Astarte crenata and Bathyarca glacialis dataset Dataset 2021 ftdatacite https://doi.org/10.5285/465b8a1a-53fb-4ebc-b389-57cd0fdbade9 2021-11-05T12:55:41Z Quantification of interactive effects of ocean warming and ocean acidification based on near-future climate change projections on morphometrics and oocyte size of benthic invertebrates (the bivalves Astarte crenata and Bathyarca glacialis) from the Western Barents Sea. Supported by The Changing Arctic Ocean Seafloor (ChAOS) - how changing sea ice conditions impact biological communities, biogeochemical processes and ecosystems project (NE/N015894/1 and NE/P006426/1, 2017-2021), Natural Environment Research Council (NERC) in the UK. : Specimens were collected from each of 1 station in 2017 (B13) and 2 stations in 2018 (B16 and B17) during two consecutive cruises (RRS James Clark Ross: JR16006, 30th June to 8th August 2017; JR17007: 10th July to 5th August, 2018) following a transect along the 30°E meridian. At each station similar-sized specimens of the infaunal bivalves Astarte crenata and Bathyarca glacialis were obtained by Agassiz trawl. Surficial sediment <10 cm deep was collected using SMBA box cores, sieved to remove macrofauna (500 µm mesh), and homogenised by stirring. Both infaunal bivalves and sediment were maintained under aerated seawater and returned to the Biodiversity and Ecosystem Futures Facility, University of Southampton at ambient temperature (1.5 + 1°C). Ten centimetres of homogenised sediment were transferred to transparent acrylic aquaria (internal dimensions, LWH: 20 x 20 x 34 cm) and overlain with ~8 L (20cm depth) surface seawater (salinity, ~34). Aquaria were maintained in the dark at ambient conditions (1-2 °C and ~400 ppm [CO2]), and randomly distributed between two insulated fibreglass seawater baths (LWH: 1.2 x 1.2 x 0.8m, Tanks Direct, UK). Three B. glacialis were introduced to each of twelve aquaria (n = 36; ambient 18, future 18) and six A.crenata were introduced to each of ten aquaria (n = 60; 30 ambient, 30 future). After a 30-day acclimation period to aquarium conditions, temperature and [CO2] were manually adjusted (1 °C and ~100 ppm CO2 week -1) to achieve near-future treatment conditions (3-5 °C and ~550 ppm [CO2]). We periodically measured pH, temperature and salinity and total alkalinity. The bivalves were fed ad libitum three time per week (100 ml cultured live Isochrysis sp., Tetraselmis sp., and Phaeodactylum sp.), and overlying water exchanged weekly. Experiments were run for 120 days (B. glacialis, 21//11/2017-20/03/2018) or 135 days (A. crenata, 08/10/2018-19/02/2019) after which animals were removed and fixed in 4 neutral buffered formaldehyde. Morphology: Biometric measurements (maximum shell height, shell length, shell width and weight) were determined using a digital calliper (± 0.01mm), and bivalves within a specific size range selected for histological analyses (A. crenata 25-30 mm shell length - n = 37 [19 ambient, 18 future]; B. glacialis 20-25 mm shell length - n = 24 [12 ambient, 12 future]). N.B., Biometric measurements for all A. crenata (n = 59, including those selected for histological analyses,) less one damaged individual are contained in the attached spreadsheet (Astarte_Morphology.CSV file). However, owed to several individuals being pooled in sample jars at the end of the experiment, only biometric measurements for specimens that could be individually identified (and selected for histological analyses) are contained in the attached spreadsheet (Bathyarca_Morphology.CSV file). Oocyte size: Soft tissue of each specimen was processed using standard protocols for wax histology and stained using haematoxylin Z and the counterstain eosin. The oocyte size distribution of 100 oocytes per female was measured, where the size of each oocyte was standardised to the diameter of a circle with an equal aggregate cross-sectional area to the two-dimensional section of the imaged oocyte (i.e., Equivalent Circular Diameter (ECD)). N.B. Oocyte size (ECD) was only measured for females where oocytes were complete and/or present in a sufficient number (100+) to ensure robust quantitative analysis. The number of pixels equivalent to each ECD measurement (i.e., 'Pixel_diameter') is also indicated in the attached spreadsheets (Astarte_Oocyte_Size.CSV file and Bathyarca_Oocyte_Size.CSV file). Variability in the quality of tissue preservation rendered the oocytes of some females not measurable. Full descriptions and additional information provided in Reed et al. 2021 Frontiers in Marine Science in main manuscript and supplementary information. : Resolution: Biometric measurements (i.e., shell length, shell height and tumidity (width) to two decimal places. Wet weight to four decimal places. Oocyte Equivalent Circular Diameter to two decimal places. Instrumentation: Mettler-Toledo InLab Expert Pro temperature-pH combination electrode Mettler-Toledo InLab 737 IP67 temperature-conductivity combination electrode Digital vernier calliper Balance (+/-0.000g) Rotary microtome Nikon D5000 digital SLR camera Olympus BHS (BH-2) stereomicroscope : Standard protocols were followed and data entry double checked by independent person. Dataset Arctic Arctic Arctic Ocean Barents Sea Climate change Ocean acidification Sea ice DataCite Metadata Store (German National Library of Science and Technology) Arctic Arctic Ocean Barents Sea Toledo ENVELOPE(-67.317,-67.317,-73.700,-73.700) Olympus ENVELOPE(156.767,156.767,-80.217,-80.217)