jamesrco/LipidPhotoOxBox: LipidPhotoOxBox v1.0.0 ...

• Main Authors: Collins, James R., Van Mooy, Benjamin A. S., Marchetti, Adrian, Ducklow, Hugh W.
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Zenodo 2017
• Subjects: lipids; lipid photooxidation; ultraviolet radiation; geoscience software; biogeochemistry; phosphatidylcholine; HPLC-ESI-MS; West Antarctica; Moreno; Diaz; Antarc*; Antarctica
• Online Access: https://dx.doi.org/10.5281/zenodo.841930; https://zenodo.org/record/841930

Initial release of data and code in LipidPhotoOxBox to support Collins, J. R., H. F. Fredricks, J. M. Diaz, J. S. Bowman, C. P. Ward, C. Moreno, K. Longnecker, A. Marchetti, C. M. Hansel, H. W. Ducklow, and B. A. S. Van Mooy (2017), The diverse products and biogeochemical significance of lipid photooxidation in coastal surface waters of West Antarctica . ... : {"references": ["Collins, J.R., Edwards, B.R., Fredricks, H.F. and Van Mooy, B.A.S. (2016) LOBSTAHS: An adduct-based lipidomics strategy for discovery and identification of oxidative stress biomarkers. Anal. Chem. 88, 7154-7162.", "Benton, H.P., Want, E.J. and Ebbels, T.M.D. (2010) Correction of mass calibration gaps in liquid chromatography-mass spectrometry metabolomics data. Bioinformatics 26, 2488-2489.", "Smith, C.A., Want, E.J., O'Maille, G., Abagyan, R. and Siuzdak, G. (2006) XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal. Chem. 78, 779\u2013787.", "Tautenhahn, R., Boettcher, C. and Neumann, S. (2008) Highly sensitive feature detection for high resolution LC/MS. BMC Bioinformatics 9, 504.", "Libiseller, G., Dvorzak, M., Kleb, U., Gander, E., Eisenberg, T., Madeo, F., Neumann, S., Trausinger, G., Sinner, F., Pieber, T. and Magnes, C. (2015) IPO: a tool for automated optimization of XCMS parameters. BMC Bioinformatics ...