18S rRNA V9 taxonomic classifier ...
18S metabarcoding databases and naive-bayes classifier specific to the V9 region. Built from the PR2 v5.0.0 database using Qiime2 (version 2021.2). Primers used: 1391f: GTACACACCGCCCGTC EukBr: TGATCCTTCTGCAGGTTCACCTAC File Description pr2_seqs.qza |. Full length PR2 v5.0.0 sequences pr2_tax.qza | Ta...
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Online Access: | https://dx.doi.org/10.5281/zenodo.8392705 https://zenodo.org/doi/10.5281/zenodo.8392705 |
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ftdatacite:10.5281/zenodo.8392705 2023-12-31T10:21:32+01:00 18S rRNA V9 taxonomic classifier ... Anderson, Sean Silliman, Katherine Thompson, Luke 2023 https://dx.doi.org/10.5281/zenodo.8392705 https://zenodo.org/doi/10.5281/zenodo.8392705 unknown Zenodo https://dx.doi.org/10.5281/zenodo.8392706 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 metabarcoding reference database 18S rRNA Dataset dataset 2023 ftdatacite https://doi.org/10.5281/zenodo.839270510.5281/zenodo.8392706 2023-12-01T11:28:11Z 18S metabarcoding databases and naive-bayes classifier specific to the V9 region. Built from the PR2 v5.0.0 database using Qiime2 (version 2021.2). Primers used: 1391f: GTACACACCGCCCGTC EukBr: TGATCCTTCTGCAGGTTCACCTAC File Description pr2_seqs.qza |. Full length PR2 v5.0.0 sequences pr2_tax.qza | Taxa for PR2 v5.0.0 database refseqs_V9.qza. | Sequences for 18S V9 (primers 1391f, EukBrr), extracted from PR2 SSU v5.0.0, generated by qiime2-2021.2 (forward compatible) classifier_V9.qza | Unweighted (uniform) naive-bayes classifier for 18S V9 extracted from PR2 SSU v5.0.0, generated by qiime2-2021.2 ... : "This work was supported by award 21392 to the Northern Gulf Institute from NOAA/OAR Ocean Acidification Program." ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
metabarcoding reference database 18S rRNA |
spellingShingle |
metabarcoding reference database 18S rRNA Anderson, Sean Silliman, Katherine Thompson, Luke 18S rRNA V9 taxonomic classifier ... |
topic_facet |
metabarcoding reference database 18S rRNA |
description |
18S metabarcoding databases and naive-bayes classifier specific to the V9 region. Built from the PR2 v5.0.0 database using Qiime2 (version 2021.2). Primers used: 1391f: GTACACACCGCCCGTC EukBr: TGATCCTTCTGCAGGTTCACCTAC File Description pr2_seqs.qza |. Full length PR2 v5.0.0 sequences pr2_tax.qza | Taxa for PR2 v5.0.0 database refseqs_V9.qza. | Sequences for 18S V9 (primers 1391f, EukBrr), extracted from PR2 SSU v5.0.0, generated by qiime2-2021.2 (forward compatible) classifier_V9.qza | Unweighted (uniform) naive-bayes classifier for 18S V9 extracted from PR2 SSU v5.0.0, generated by qiime2-2021.2 ... : "This work was supported by award 21392 to the Northern Gulf Institute from NOAA/OAR Ocean Acidification Program." ... |
format |
Dataset |
author |
Anderson, Sean Silliman, Katherine Thompson, Luke |
author_facet |
Anderson, Sean Silliman, Katherine Thompson, Luke |
author_sort |
Anderson, Sean |
title |
18S rRNA V9 taxonomic classifier ... |
title_short |
18S rRNA V9 taxonomic classifier ... |
title_full |
18S rRNA V9 taxonomic classifier ... |
title_fullStr |
18S rRNA V9 taxonomic classifier ... |
title_full_unstemmed |
18S rRNA V9 taxonomic classifier ... |
title_sort |
18s rrna v9 taxonomic classifier ... |
publisher |
Zenodo |
publishDate |
2023 |
url |
https://dx.doi.org/10.5281/zenodo.8392705 https://zenodo.org/doi/10.5281/zenodo.8392705 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://dx.doi.org/10.5281/zenodo.8392706 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.5281/zenodo.839270510.5281/zenodo.8392706 |
_version_ |
1786832350526570496 |