hdr-bgnn/Morphology-analysis: Version 1.0.0 ...
Release created to populate Zenodo. This code base produces a presence-absence table (default), create landmarks (optional), visualization of landmarks (optional), and extracts measurements (optional) from a segmented fish image (see BGNN-trait-segmentation). Secondarily, this repository provides a...
Main Authors: | , , , |
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Format: | Software |
Language: | unknown |
Published: |
Zenodo
2023
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Subjects: | |
Online Access: | https://dx.doi.org/10.5281/zenodo.7987696 https://zenodo.org/record/7987696 |
Summary: | Release created to populate Zenodo. This code base produces a presence-absence table (default), create landmarks (optional), visualization of landmarks (optional), and extracts measurements (optional) from a segmented fish image (see BGNN-trait-segmentation). Secondarily, this repository provides a framework for creating modularized tools by using classes. A Docker container image of this codebase and its dependencies is automatically built and published each time a new release is published. The Docker container isolates dependencies and facilitates reproducible and version-tagged integration into Imageomics workflows (see for example the BGNN Core Workflow). This tool was originally developed for the Minnows Project. ... |
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