Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 )
This folder contains analysis data from the study published as article: TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer AUTHORS: Stephanie Elferink Stefan Neuhaus Sylke Wohlrab Kerstin Toebe Daniela Voß Marc Gottschling Nina Lundholm Be...
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Online Access: | https://dx.doi.org/10.5281/zenodo.735328 https://zenodo.org/record/735328 |
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ftdatacite:10.5281/zenodo.735328 2023-05-15T14:29:30+02:00 Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) Elferink, Stephanie Neuhaus, Stefan Wohlrab, Sylke Toebe, Kerstin Voß, Daniela Gottschling, Marc Lundholm, Nina Krock, Bernd Koch, Boris P. Zielinski, Oliver Cembella, Allen John, Uwe 2017 https://dx.doi.org/10.5281/zenodo.735328 https://zenodo.org/record/735328 unknown Zenodo https://dx.doi.org/10.5281/zenodo.242257 Open Access Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 info:eu-repo/semantics/openAccess CC-BY 454 Pyrosequencing; Aquatic communities; Arctic; Biodiversity; DNA-barcoding; Phytoplankton community; Pelagic environment dataset Dataset 2017 ftdatacite https://doi.org/10.5281/zenodo.735328 https://doi.org/10.5281/zenodo.242257 2021-11-05T12:55:41Z This folder contains analysis data from the study published as article: TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer AUTHORS: Stephanie Elferink Stefan Neuhaus Sylke Wohlrab Kerstin Toebe Daniela Voß Marc Gottschling Nina Lundholm Bernd Krock Boris P. Koch Oliver Zielinski Allan Cembella Uwe John JOURNAL: Deep Sea Research Part I: Oceanographic Research Papers MS-ID: DSRI2707 List of Files: Description: Filename ------------------------------------------------------------------------------------------------------------------------- QIIME-ZIP archive from the QZIP-pipeline: Greenland_Iceland_Euk_28S_M_N_P_combined_R454_20150618_173010.zip (the QZIP addionally contains OTU table as biom, OTU sequences, pipeline log files, result statistics, configure files; to navigate in the QZIP use index.htm) OTU table from QZIP: Greenland_Iceland_Euk_28S_M_N_P_combined_OTU.tab (OTU representatives taxonomically annotated by QIIME internal UCLUST consensus classifier) Phyloassigner OTU annotations: Greenland_Iceland_28S_M_N_P_combined_Strameno_pa.annotation and Greenland_Iceland_28S_M_N_P_combined_Dino_pa.annotation (Additional annotation of Stramenopile and Dinoflagellate OTUs based on phylogenetic placement and LCA determination) Phyloassigner databases: Stramenopiles_LSU_SSU_concat_1777.phyloassignerdb/ and Dinoflagellates_LSU_SSU_concat_640.phyloassignerdb/ This README-file: README-DSRI2707.txt ------------------------------------------------------------------------------------------------------------------------- For further information on supplement data and related publications see Bioinformatics Group at AWI: http://www.awi.de/en/go/bioinformatics and links therein. Bremerhaven, 04/Jan/2017 Dataset Arctic biodiversity Arctic Greenland Phytoplankton DataCite Metadata Store (German National Library of Science and Technology) Arctic Greenland |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
454 Pyrosequencing; Aquatic communities; Arctic; Biodiversity; DNA-barcoding; Phytoplankton community; Pelagic environment |
spellingShingle |
454 Pyrosequencing; Aquatic communities; Arctic; Biodiversity; DNA-barcoding; Phytoplankton community; Pelagic environment Elferink, Stephanie Neuhaus, Stefan Wohlrab, Sylke Toebe, Kerstin Voß, Daniela Gottschling, Marc Lundholm, Nina Krock, Bernd Koch, Boris P. Zielinski, Oliver Cembella, Allen John, Uwe Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
topic_facet |
454 Pyrosequencing; Aquatic communities; Arctic; Biodiversity; DNA-barcoding; Phytoplankton community; Pelagic environment |
description |
This folder contains analysis data from the study published as article: TITLE: Molecular diversity patterns among various phytoplankton size-fractions in West Greenland in late summer AUTHORS: Stephanie Elferink Stefan Neuhaus Sylke Wohlrab Kerstin Toebe Daniela Voß Marc Gottschling Nina Lundholm Bernd Krock Boris P. Koch Oliver Zielinski Allan Cembella Uwe John JOURNAL: Deep Sea Research Part I: Oceanographic Research Papers MS-ID: DSRI2707 List of Files: Description: Filename ------------------------------------------------------------------------------------------------------------------------- QIIME-ZIP archive from the QZIP-pipeline: Greenland_Iceland_Euk_28S_M_N_P_combined_R454_20150618_173010.zip (the QZIP addionally contains OTU table as biom, OTU sequences, pipeline log files, result statistics, configure files; to navigate in the QZIP use index.htm) OTU table from QZIP: Greenland_Iceland_Euk_28S_M_N_P_combined_OTU.tab (OTU representatives taxonomically annotated by QIIME internal UCLUST consensus classifier) Phyloassigner OTU annotations: Greenland_Iceland_28S_M_N_P_combined_Strameno_pa.annotation and Greenland_Iceland_28S_M_N_P_combined_Dino_pa.annotation (Additional annotation of Stramenopile and Dinoflagellate OTUs based on phylogenetic placement and LCA determination) Phyloassigner databases: Stramenopiles_LSU_SSU_concat_1777.phyloassignerdb/ and Dinoflagellates_LSU_SSU_concat_640.phyloassignerdb/ This README-file: README-DSRI2707.txt ------------------------------------------------------------------------------------------------------------------------- For further information on supplement data and related publications see Bioinformatics Group at AWI: http://www.awi.de/en/go/bioinformatics and links therein. Bremerhaven, 04/Jan/2017 |
format |
Dataset |
author |
Elferink, Stephanie Neuhaus, Stefan Wohlrab, Sylke Toebe, Kerstin Voß, Daniela Gottschling, Marc Lundholm, Nina Krock, Bernd Koch, Boris P. Zielinski, Oliver Cembella, Allen John, Uwe |
author_facet |
Elferink, Stephanie Neuhaus, Stefan Wohlrab, Sylke Toebe, Kerstin Voß, Daniela Gottschling, Marc Lundholm, Nina Krock, Bernd Koch, Boris P. Zielinski, Oliver Cembella, Allen John, Uwe |
author_sort |
Elferink, Stephanie |
title |
Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
title_short |
Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
title_full |
Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
title_fullStr |
Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
title_full_unstemmed |
Supplement of manuscript DSRI2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
title_sort |
supplement of manuscript dsri2707 ( http://dx.doi.org/10.1016/j.dsr.2016.11.002 ) |
publisher |
Zenodo |
publishDate |
2017 |
url |
https://dx.doi.org/10.5281/zenodo.735328 https://zenodo.org/record/735328 |
geographic |
Arctic Greenland |
geographic_facet |
Arctic Greenland |
genre |
Arctic biodiversity Arctic Greenland Phytoplankton |
genre_facet |
Arctic biodiversity Arctic Greenland Phytoplankton |
op_relation |
https://dx.doi.org/10.5281/zenodo.242257 |
op_rights |
Open Access Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 info:eu-repo/semantics/openAccess |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.5281/zenodo.735328 https://doi.org/10.5281/zenodo.242257 |
_version_ |
1766303492699324416 |