Xiphinema parasimile Barsi et Lamberti 2004

Xiphinema parasimile Barsi et Lamberti, 2004 (Figs 1; 2A, D, F, I-K, N, P, T; 3 A-C; 4 A-E; 5 A-C; 6-8) Measurements. See Tables 1-3; Description. Females. Body C to spiral shaped. Labial region 4-5 µm high, setoff from the rest of the body. Amphids hardly visible, its opening 4 µm in a paratype spe...

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Main Authors: Lazarova, Stela, De Luca, Francesca, Peneva, Vlada
Format: Text
Language:unknown
Published: Zenodo 2008
Subjects:
Paa
Online Access:https://dx.doi.org/10.5281/zenodo.3792764
https://zenodo.org/record/3792764
id ftdatacite:10.5281/zenodo.3792764
record_format openpolar
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Biodiversity
Taxonomy
Animalia
Nematoda
Adenophorea
Dorylaimida
Longidoridae
Xiphinema
Xiphinema parasimile
spellingShingle Biodiversity
Taxonomy
Animalia
Nematoda
Adenophorea
Dorylaimida
Longidoridae
Xiphinema
Xiphinema parasimile
Lazarova, Stela
De Luca, Francesca
Peneva, Vlada
Xiphinema parasimile Barsi et Lamberti 2004
topic_facet Biodiversity
Taxonomy
Animalia
Nematoda
Adenophorea
Dorylaimida
Longidoridae
Xiphinema
Xiphinema parasimile
description Xiphinema parasimile Barsi et Lamberti, 2004 (Figs 1; 2A, D, F, I-K, N, P, T; 3 A-C; 4 A-E; 5 A-C; 6-8) Measurements. See Tables 1-3; Description. Females. Body C to spiral shaped. Labial region 4-5 µm high, setoff from the rest of the body. Amphids hardly visible, its opening 4 µm in a paratype specimen (40 % of the corresponding body width); 5-5.5 µm wide in specimens from Vinogradets and Orlyane (50-64 %). Odontostyle with poorly developed basal collar. Pharyngeal characters presented in Table 2. Reproductive system amphidelphic, symbiont bacteria present in the ovaries. Uteri short, ovejector and separate uteri present (Table 3); vagina 41.5 -52.2% of the corresponding body width (averages 48.4±1.4, n=5, paratype material; 46.4±3.4, n=17, Vi 46.8±1.4, n=7, Or ). Sperm cells observed in some of the females from Vinogradets. Tail conical, dorsally convex, ventrally almost straight or slightly concave with pointed terminus. Male. One specimen was found in Vinogradets population. Male similar to the female with posterior region more strongly curved. Lip region and tail shape as in females, a difference was observed within anal body width, which reflect the lower c’ value. Spicules slightly curved, lateral guiding piece 4 µm long. Adanal supplement pair preceded by a row of five irregularly spaced supplements. Tail conoid, ventrally straight, dorsally convex with pointed terminus. Juveniles. The scatter diagram based on functional and replacement odontostyle, and body length revealed presence of four juvenile stages (Fig. 7). PCR-RFLP analysis. The amplification of the D1-D2 expansion domains of X. parasimile generated a unique band of about 0.8 kb. Th e restriction fragments of the amplified region of X. parasimile population from Vinogradets locality using several enzymes are presented in Fig. 8. Remarks. Metric data are within the ranges reported in the original description, with slightly lower average values for the female body length (1.78-1.82 vs 1.93-1.99 Terminology adopted by Loof and Coomans, 1972 * and Andrássy, 1998 ** mm). odontophore length (37.5-38.0 vs 40.7-41.6 µm), and body width (26.5-27.1 vs 27.9-28.3 µm) for the Bulgarian populations. Male of X. parasimile compared to X. simile males from Serbia and Bulgaria had posterior part of the body less curved and a shorter body (1.84 vs 1.98-2.13 mm), narrower lip region (8.5 vs 10-10.5 µm), longer odontostyle (72 vs 63-69 µm) and shorter lateral guiding piece (4 vs 6 µm). The RFLP results showed that the Bulgarian population of X. parasimile has the same restriction profiles as that from Serbia (Barsi and De Luca 2008). The enzyme Ava II produced in the Bulgarian population two extra bands that were absent in X. parasimile from Serbia, suggesting the existence of differences in restriction sites in D1-D2 sequences. Furthermore, the enzyme Alu I always showed a band of 0.8 kb, corresponding to the undigested product, along with the expected restriction fragments suggesting microheterogeneity of the D1-D2 region of Bulgarian materials of X. parasimile (Powers et al. 1997, Hugall et al. 1999, Hung et al. 1999, Subbotin et al. 2000, Morales-Hojas et al. 2001, Elbadri et al. 2002, Otranto et al. 2003, De Luca et al. 2004). : Published as part of Lazarova, Stela, De Luca, Francesca & Peneva, Vlada, 2008, On two closely related species of Xiphinema americanum-group: X. simile Lamberti, Choleva & Agostinelli, 1983 and X. parasimile Barsi & Lamberti, 2004 (Longidoridae), with a description of the male of X. parasimile, pp. 29-50 in ZooKeys 3 (3) on pages 31-41, DOI: 10.3897/zookeys.3.26, http://zenodo.org/record/576416 : {"references": ["Barsi L, Lamberti F (2004) Xiphinema parasimile sp. n. from Serbia and X. simile, first record from Bosnia and Herzegovina (Nematoda, Dorylaimida). Nematologia mediterranea 32: 101 - 109.", "Loof PAA, Coomans A (1972) Th e oesophageal gland nuclei of Longidoridae (Dorylaimida). Nematologica 18: 213 - 233.", "Andrassy I (1998) The genus Boreolaimus gen. n. and its six species (Dorylaimida: Qudsianematidae), nematodes from the European Arctic. Fundamental and Applied Nematology 21: 553 - 567.", "Barsi L, De Luca F (2008) Morphological and molecular characterisation of two putative Xiphinema americanum group species, X. parasimile and X. simile (Nematoda: Dorylaimida) from Serbia. Nematology 10: 15 - 25.", "Powers TO, Todd TC, Burnell AM, Murray PCB, Fleming CC, Szalanski AL, Adams BA, Harris T S (1997) Th e internal transcribed spacer region as a taxonomic marker for nematodes. Journal of Nematology 29: 441 - 450.", "Hugall A, Stanton J, Moritz C (1999) Reticulate evolution and the origins of ribosomal internal transcribed spacer diversity in apomictic Meloidogyne. Molecular Biology and Evolution 16: 157 - 64.", "Hung GC, Chilton NB, Beveridge I, Zhu XQ, Lichtenfels JR, Gasser RB (1999) Molecular evidence for cryptic species within Cylicostephanus minutus (Nematoda: Strongylidae). International Journal for Parasitology 29: 285 - 291.", "Subbotin SA, Halford PD, Warry A, Perry RN (2000) Variations in ribosomal DNA sequences and phylogeny of Globodera parasitising solanaceous plants. Nematology 2: 591 - 604.", "Morales-Hojas R, Post RJ, Shelley AJ, Maia-Herzog M, Coscaron S, Cheke RA (2001) Characterisation of nuclear ribosomal DNA sequences from Onchocerca volvulus and Mansonella ozzardi (Nematodi: Filarioidea) and development of a PCR-based method for their detection in skin biopsies. International Journal for Parasitology 31: 169 - 177.", "Elbadri GAA, De Ley P, Waeyenberge L, Viersstraete A, Moens M, Vanfleteren J (2002) Intraspecific variation in Radopholus similis isolates assessed with restriction fragment length polymorphism and DNA sequencing of the internal transcribed spacer region of the ribosomal RNA cistron. International Journal for Parasitology 32: 199 - 205.", "Otranto D, Tarsitano E, Traversa D, De Luca F, Giangaspero A (2003) Molecular epidemiological survey on the vectors of Thelazia gulosa, Thelazia rhodesi and Thelazia skrjabini (Spirurida: Th elaziidae). Parasitology 127: 365 - 373.", "De Luca F, Reyes A, Grunder J, Kunz P, Agostinelli A, De Giorgi C, Lamberti F (2004) Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda). Journal of Nematology 36: 147 - 152."]}
format Text
author Lazarova, Stela
De Luca, Francesca
Peneva, Vlada
author_facet Lazarova, Stela
De Luca, Francesca
Peneva, Vlada
author_sort Lazarova, Stela
title Xiphinema parasimile Barsi et Lamberti 2004
title_short Xiphinema parasimile Barsi et Lamberti 2004
title_full Xiphinema parasimile Barsi et Lamberti 2004
title_fullStr Xiphinema parasimile Barsi et Lamberti 2004
title_full_unstemmed Xiphinema parasimile Barsi et Lamberti 2004
title_sort xiphinema parasimile barsi et lamberti 2004
publisher Zenodo
publishDate 2008
url https://dx.doi.org/10.5281/zenodo.3792764
https://zenodo.org/record/3792764
long_lat ENVELOPE(-85.933,-85.933,-78.050,-78.050)
ENVELOPE(-55.833,-55.833,-63.000,-63.000)
ENVELOPE(-53.483,-53.483,66.017,66.017)
ENVELOPE(-128.689,-128.689,69.800,69.800)
ENVELOPE(-45.133,-45.133,-60.767,-60.767)
geographic Arctic
Todd
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Paa
Stanton
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geographic_facet Arctic
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genre Arctic
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spelling ftdatacite:10.5281/zenodo.3792764 2023-05-15T15:20:40+02:00 Xiphinema parasimile Barsi et Lamberti 2004 Lazarova, Stela De Luca, Francesca Peneva, Vlada 2008 https://dx.doi.org/10.5281/zenodo.3792764 https://zenodo.org/record/3792764 unknown Zenodo http://zenodo.org/record/576416 http://publication.plazi.org/id/FFE2FFF1DC3C021A4E0F8445FFE8695F https://zenodo.org/communities/biosyslit https://dx.doi.org/10.3897/zookeys.3.26 http://zenodo.org/record/576416 http://publication.plazi.org/id/FFE2FFF1DC3C021A4E0F8445FFE8695F https://dx.doi.org/10.5281/zenodo.3778903 https://dx.doi.org/10.5281/zenodo.3767151 https://dx.doi.org/10.5281/zenodo.3767153 https://dx.doi.org/10.5281/zenodo.3767155 https://dx.doi.org/10.5281/zenodo.3767157 https://dx.doi.org/10.5281/zenodo.3778905 https://dx.doi.org/10.5281/zenodo.3767159 https://dx.doi.org/10.5281/zenodo.3792763 https://zenodo.org/communities/biosyslit Open Access Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 info:eu-repo/semantics/openAccess CC0 Biodiversity Taxonomy Animalia Nematoda Adenophorea Dorylaimida Longidoridae Xiphinema Xiphinema parasimile Taxonomic treatment article-journal Text ScholarlyArticle 2008 ftdatacite https://doi.org/10.5281/zenodo.3792764 https://doi.org/10.3897/zookeys.3.26 https://doi.org/10.5281/zenodo.3778903 https://doi.org/10.5281/zenodo.3767151 https://doi.org/10.5281/zenodo.3767153 https://doi.org/10.5281/zenodo.3767155 https://doi 2022-02-08T12:07:57Z Xiphinema parasimile Barsi et Lamberti, 2004 (Figs 1; 2A, D, F, I-K, N, P, T; 3 A-C; 4 A-E; 5 A-C; 6-8) Measurements. See Tables 1-3; Description. Females. Body C to spiral shaped. Labial region 4-5 µm high, setoff from the rest of the body. Amphids hardly visible, its opening 4 µm in a paratype specimen (40 % of the corresponding body width); 5-5.5 µm wide in specimens from Vinogradets and Orlyane (50-64 %). Odontostyle with poorly developed basal collar. Pharyngeal characters presented in Table 2. Reproductive system amphidelphic, symbiont bacteria present in the ovaries. Uteri short, ovejector and separate uteri present (Table 3); vagina 41.5 -52.2% of the corresponding body width (averages 48.4±1.4, n=5, paratype material; 46.4±3.4, n=17, Vi 46.8±1.4, n=7, Or ). Sperm cells observed in some of the females from Vinogradets. Tail conical, dorsally convex, ventrally almost straight or slightly concave with pointed terminus. Male. One specimen was found in Vinogradets population. Male similar to the female with posterior region more strongly curved. Lip region and tail shape as in females, a difference was observed within anal body width, which reflect the lower c’ value. Spicules slightly curved, lateral guiding piece 4 µm long. Adanal supplement pair preceded by a row of five irregularly spaced supplements. Tail conoid, ventrally straight, dorsally convex with pointed terminus. Juveniles. The scatter diagram based on functional and replacement odontostyle, and body length revealed presence of four juvenile stages (Fig. 7). PCR-RFLP analysis. The amplification of the D1-D2 expansion domains of X. parasimile generated a unique band of about 0.8 kb. Th e restriction fragments of the amplified region of X. parasimile population from Vinogradets locality using several enzymes are presented in Fig. 8. Remarks. Metric data are within the ranges reported in the original description, with slightly lower average values for the female body length (1.78-1.82 vs 1.93-1.99 Terminology adopted by Loof and Coomans, 1972 * and Andrássy, 1998 ** mm). odontophore length (37.5-38.0 vs 40.7-41.6 µm), and body width (26.5-27.1 vs 27.9-28.3 µm) for the Bulgarian populations. Male of X. parasimile compared to X. simile males from Serbia and Bulgaria had posterior part of the body less curved and a shorter body (1.84 vs 1.98-2.13 mm), narrower lip region (8.5 vs 10-10.5 µm), longer odontostyle (72 vs 63-69 µm) and shorter lateral guiding piece (4 vs 6 µm). The RFLP results showed that the Bulgarian population of X. parasimile has the same restriction profiles as that from Serbia (Barsi and De Luca 2008). The enzyme Ava II produced in the Bulgarian population two extra bands that were absent in X. parasimile from Serbia, suggesting the existence of differences in restriction sites in D1-D2 sequences. Furthermore, the enzyme Alu I always showed a band of 0.8 kb, corresponding to the undigested product, along with the expected restriction fragments suggesting microheterogeneity of the D1-D2 region of Bulgarian materials of X. parasimile (Powers et al. 1997, Hugall et al. 1999, Hung et al. 1999, Subbotin et al. 2000, Morales-Hojas et al. 2001, Elbadri et al. 2002, Otranto et al. 2003, De Luca et al. 2004). : Published as part of Lazarova, Stela, De Luca, Francesca & Peneva, Vlada, 2008, On two closely related species of Xiphinema americanum-group: X. simile Lamberti, Choleva & Agostinelli, 1983 and X. parasimile Barsi & Lamberti, 2004 (Longidoridae), with a description of the male of X. parasimile, pp. 29-50 in ZooKeys 3 (3) on pages 31-41, DOI: 10.3897/zookeys.3.26, http://zenodo.org/record/576416 : {"references": ["Barsi L, Lamberti F (2004) Xiphinema parasimile sp. n. from Serbia and X. simile, first record from Bosnia and Herzegovina (Nematoda, Dorylaimida). Nematologia mediterranea 32: 101 - 109.", "Loof PAA, Coomans A (1972) Th e oesophageal gland nuclei of Longidoridae (Dorylaimida). Nematologica 18: 213 - 233.", "Andrassy I (1998) The genus Boreolaimus gen. n. and its six species (Dorylaimida: Qudsianematidae), nematodes from the European Arctic. Fundamental and Applied Nematology 21: 553 - 567.", "Barsi L, De Luca F (2008) Morphological and molecular characterisation of two putative Xiphinema americanum group species, X. parasimile and X. simile (Nematoda: Dorylaimida) from Serbia. Nematology 10: 15 - 25.", "Powers TO, Todd TC, Burnell AM, Murray PCB, Fleming CC, Szalanski AL, Adams BA, Harris T S (1997) Th e internal transcribed spacer region as a taxonomic marker for nematodes. Journal of Nematology 29: 441 - 450.", "Hugall A, Stanton J, Moritz C (1999) Reticulate evolution and the origins of ribosomal internal transcribed spacer diversity in apomictic Meloidogyne. Molecular Biology and Evolution 16: 157 - 64.", "Hung GC, Chilton NB, Beveridge I, Zhu XQ, Lichtenfels JR, Gasser RB (1999) Molecular evidence for cryptic species within Cylicostephanus minutus (Nematoda: Strongylidae). International Journal for Parasitology 29: 285 - 291.", "Subbotin SA, Halford PD, Warry A, Perry RN (2000) Variations in ribosomal DNA sequences and phylogeny of Globodera parasitising solanaceous plants. Nematology 2: 591 - 604.", "Morales-Hojas R, Post RJ, Shelley AJ, Maia-Herzog M, Coscaron S, Cheke RA (2001) Characterisation of nuclear ribosomal DNA sequences from Onchocerca volvulus and Mansonella ozzardi (Nematodi: Filarioidea) and development of a PCR-based method for their detection in skin biopsies. International Journal for Parasitology 31: 169 - 177.", "Elbadri GAA, De Ley P, Waeyenberge L, Viersstraete A, Moens M, Vanfleteren J (2002) Intraspecific variation in Radopholus similis isolates assessed with restriction fragment length polymorphism and DNA sequencing of the internal transcribed spacer region of the ribosomal RNA cistron. International Journal for Parasitology 32: 199 - 205.", "Otranto D, Tarsitano E, Traversa D, De Luca F, Giangaspero A (2003) Molecular epidemiological survey on the vectors of Thelazia gulosa, Thelazia rhodesi and Thelazia skrjabini (Spirurida: Th elaziidae). Parasitology 127: 365 - 373.", "De Luca F, Reyes A, Grunder J, Kunz P, Agostinelli A, De Giorgi C, Lamberti F (2004) Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda). Journal of Nematology 36: 147 - 152."]} Text Arctic DataCite Metadata Store (German National Library of Science and Technology) Arctic Todd ENVELOPE(-85.933,-85.933,-78.050,-78.050) Morales ENVELOPE(-55.833,-55.833,-63.000,-63.000) Paa ENVELOPE(-53.483,-53.483,66.017,66.017) Stanton ENVELOPE(-128.689,-128.689,69.800,69.800) Giorgi ENVELOPE(-45.133,-45.133,-60.767,-60.767)