Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida
This is an annotation file, delivering the Diamond-BLASTx results for the contigs of the transcriptome assemblies of Thalassiosira hyalina and Nitzschia frigida. Theswe originate from a time course experiment, in which these two species were exposed to high light stress and monitored over 120h under...
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ftdatacite:10.5281/zenodo.3362086 2023-05-15T15:02:59+02:00 Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida Rokitta, Sebastian 2019 https://dx.doi.org/10.5281/zenodo.3362086 https://zenodo.org/record/3362086 en eng Zenodo https://dx.doi.org/10.5281/zenodo.3362085 Open Access Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 info:eu-repo/semantics/openAccess CC-BY Transcriptome assembly, Thalassiosira hyalina, Nitzschia frigida, Trinity, BLAStx dataset Dataset 2019 ftdatacite https://doi.org/10.5281/zenodo.3362086 https://doi.org/10.5281/zenodo.3362085 2021-11-05T12:55:41Z This is an annotation file, delivering the Diamond-BLASTx results for the contigs of the transcriptome assemblies of Thalassiosira hyalina and Nitzschia frigida. Theswe originate from a time course experiment, in which these two species were exposed to high light stress and monitored over 120h under low and high pCO2. The corresponding Sequencing data is deposited at the EBI ArrayExpress database under accession number E-MTAB-6999. Contigs were created with Trinity Assembler and are available under DOI:10.5281/zenodo.3361258 The according publication is currently in review (8/6/2019): Higher sensitivity towards light stress and ocean acidification in an Arctic sympagic compared to a pelagic diatom; Author team: Ane C. Kvernvik, Sebastian D. Rokitta, Eva Leu, Lars Harms, Tove M. Gabrielsen, Björn Rost and Clara J. M. Hoppe Do not hesitate to contact the authors if you like more information! Dataset Arctic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) Arctic Kvernvik ENVELOPE(11.529,11.529,64.731,64.731) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Transcriptome assembly, Thalassiosira hyalina, Nitzschia frigida, Trinity, BLAStx |
spellingShingle |
Transcriptome assembly, Thalassiosira hyalina, Nitzschia frigida, Trinity, BLAStx Rokitta, Sebastian Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida |
topic_facet |
Transcriptome assembly, Thalassiosira hyalina, Nitzschia frigida, Trinity, BLAStx |
description |
This is an annotation file, delivering the Diamond-BLASTx results for the contigs of the transcriptome assemblies of Thalassiosira hyalina and Nitzschia frigida. Theswe originate from a time course experiment, in which these two species were exposed to high light stress and monitored over 120h under low and high pCO2. The corresponding Sequencing data is deposited at the EBI ArrayExpress database under accession number E-MTAB-6999. Contigs were created with Trinity Assembler and are available under DOI:10.5281/zenodo.3361258 The according publication is currently in review (8/6/2019): Higher sensitivity towards light stress and ocean acidification in an Arctic sympagic compared to a pelagic diatom; Author team: Ane C. Kvernvik, Sebastian D. Rokitta, Eva Leu, Lars Harms, Tove M. Gabrielsen, Björn Rost and Clara J. M. Hoppe Do not hesitate to contact the authors if you like more information! |
format |
Dataset |
author |
Rokitta, Sebastian |
author_facet |
Rokitta, Sebastian |
author_sort |
Rokitta, Sebastian |
title |
Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida |
title_short |
Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida |
title_full |
Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida |
title_fullStr |
Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida |
title_full_unstemmed |
Diamond-BLASTx of transcriptome contigs of Thalassiosira hyalina and Nitzschia frigida |
title_sort |
diamond-blastx of transcriptome contigs of thalassiosira hyalina and nitzschia frigida |
publisher |
Zenodo |
publishDate |
2019 |
url |
https://dx.doi.org/10.5281/zenodo.3362086 https://zenodo.org/record/3362086 |
long_lat |
ENVELOPE(11.529,11.529,64.731,64.731) |
geographic |
Arctic Kvernvik |
geographic_facet |
Arctic Kvernvik |
genre |
Arctic Ocean acidification |
genre_facet |
Arctic Ocean acidification |
op_relation |
https://dx.doi.org/10.5281/zenodo.3362085 |
op_rights |
Open Access Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 info:eu-repo/semantics/openAccess |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.5281/zenodo.3362086 https://doi.org/10.5281/zenodo.3362085 |
_version_ |
1766334899070959616 |