Identification of early life-history stages of Caribbean Apogon (Perciformes: Apogonidae) through DNA Barcoding

• Main Authors: Baldwin, Carole C., Brito, Balam J., Smith, David G., Weigt, Lee A., Escobar-Briones, Elva
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Zenodo 2011
• Subjects: Biodiversity; Taxonomy; Animalia; Chordata; Actinopterygii; Perciformes; Apogonidae; Austin; Indian; Sheffield; Moreno; Baldwin; Kendall; Sinclair; Randall; Elva; Moser; Kuna; Escobar; North Atlantic
• Online Access: https://dx.doi.org/10.5281/zenodo.279426; https://zenodo.org/record/279426

Baldwin, Carole C., Brito, Balam J., Smith, David G., Weigt, Lee A., Escobar-Briones, Elva (2011): Identification of early life-history stages of Caribbean Apogon (Perciformes: Apogonidae) through DNA Barcoding. Zootaxa 3133: 1-36, DOI: 10.5281/zenodo.279426 : {"references": ["Ahlstrom, E.H., Richards, W.J. & Weitzman, S.H. (1984) Families Gonostomatidae, Sternoptychidae, and associated stomiiform groups: development and relationships. In: Moser, H.G., Richards, W.J., Cohen, D. M., Fahay, M. E., Kendall Jr., A. W. & Richardson, S.L. (Eds.). Ontogeny and systematics of fishes. Special publication No. 1, American Society of Ichthyologists and Herpetologists, Lawrence, KS, pp. 184-198.", "Baldwin, C.C., Mounts J.H., Smith D.G. & Lee, A.W. (2009a) Genetic identification and color descriptions of early life-history stages of Belize Phaeoptyx and Astrapogon (Teleostei: Apogonidae) with comments on identification of adult Phaeoptyx. Zootaxa, 2008, 1-22.", "Baldwin, C.C., Weigt, L.A., Smith, D.G. & Mounts, J.H. 2009b Reconciling genetic lineages with species in western Atlantic Coryphopterus (Teleostei: Gobiidae). Pp. 113-140. In Lang, M.A., Macyntire, I.G. & Rutzler, K. (Eds) Proceedings of the Smithsonian Marine Science Symposium. Smithsonian Contributions to the Marine Sciences No. 38. Smithsonian Institution Scholarly Press, Washington, D.C. pp. 113-138.", "Baldwin, C.C., Castillo, C.I., Weigt, L. A. & Victor, B. (2011) Seven new species within western Atlantic Starksia atlantica, S. lepicoelia, and S. sluiteri (Teleostei, Labrisomidae), with comments on congruence of DNA barcodes and species. ZooKeys, 79, 21-72.", "Bohlke, J.E. & Chaplin, C.C.G. (1993) Fishes of the Bahamas and Adjacent Tropical Waters. Second Edition. University of Texas Press, Austin, 771 pp.", "Bohlke, J.E. & Randall, J.E. (1968) A key to the shallow-water Atlantic cardinalfishes (Apogonidae), with descriptions of five new species. Proceedings of the Academy of Natural Sciences of Philadelphia, 120, 175-206.", "Dale, G. (1977) Apogon mosavi, a new Western Atlantic cardinalfish, and a note on the occurrence of Apogon leptocaulus in the Bahamas. Proceedings of the Biological Society of Washington, 90, 19-29.", "Gilbert, C.R. & Tyler, J.C. (1997) Apogon robbyi a new cardinalfish (Perciformes:Apogonidae) from the Caribbean Sea. Bulletin of Marine Science, 60, 764-781.", "Gon, O. (2002) Apogonidae. In: Carpenter, K. (Ed.) The living marine resources of the Western Central North Atlantic. Vol. 3: Bony fishes part 2 (Opistognathidae to Molidae), sea turtles and marine mammals. FAO Species Identification Guide for Fishery Purposes and American Society of Ichthyologists and Herpetologists Special Publication No. 5, Rome, pp. 1386-1391.", "Hebert, P.D.N., Cywinska, A., Ball, S.L. & De Waard, J.R. (2003) Biological identifications through DNA barcodes. Proceedings of the Royal Society of London B. Biological Sciences, 270, 313-321.", "Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16, 111-120.", "Lara, M.R. (2006) Apogonidae: Cardinalfishes. In: Richards, W. J. (Ed.). Early stages of Atlantic fishes: an identification guide for western central North Atlantic. Volume II, CRC Press, Boca Raton, pp. 1363-1387.", "Longley, W.H. (1934) Studies on West Indian fishes: description of six new species. Carnegie Institution of Washington Year Book, 33, 257-260.", "Packer, L., Gibbs, J., Sheffield, C. & Hanner, R. (2009) DNA barcoding and the mediocrity of morphology. Molecular Ecology Resources, 9, 42-50.", "Pegg, G.G., Sinclair, B., Briskey, L. & Aspden, W.J. (2006) MtDNA barcode identification of fish larvae in the southern Great Barrier Reef, Australia. Scientia Marina, 70, 7-12.", "Randall, J.E. & Bohlke, J.E. (1981) The status of the cardinalfishes Apogon evermanni and A. anisolepis (Perciformes: Apogonidae) with description of a related new species from the Red Sea. Proceedings of the Academy of Natural Sciences of Philadelphia, 133, 129-140.", "Richards, W.J. (2006) Early stages of Atlantic fishes: an identification guide for western central North Atlantic. Volume II, CRC Press, Boca Raton, 2640 pp.", "Saitou, N. & Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution, 4, 406-425.", "Seutin, G., White, B.N. & Boag, P.T. (1990) Preservation of avian blood and tissue samples for DNA analysis. Canadian Journal of Zoology, 69, 82-90.", "Smith-Vaniz, W.F. (1977) Apogon gouldi n. sp., a new cardinalfish from Bermuda (Perciformes: Apogonidae). Notulae Naturae, 452, 1-8.", "Tamura, K., Dudley, J, Nei, M & Kumar, S (2007) MEGA 4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution, 24, 1596-1599.", "Thacker, C.E. & Roje, D.M. (2009) Phylogeny of cardinalfishes (Teleostei: Gobiiformes: Apogonidae) and the evolution of visceral bioluminescence. Molecular Phylogenetics and Evolution, 52, 735-745.", "Tornabene, L., Baldwin, C., Weigt, L. & Pezold, F. (2010) Exploring the diversity of Bathygobius (Teleostei: Gobiidae) using cytochrome-c oxidase subunit I, with descriptions of two new species. Aqua, International Journal of Ichthyology, 16, 141-170.", "Valdez-Moreno, M., Vasquez-Yeomans, L, Elias-Gutirrez, M., Ivanova, N.V. & Hebert P.D.N. (2010) Using DNA barcodes to connect adults and early life stages of marine fishes from the Yucatan Peninsula, Mexico: potential in fisheries management. Marine and Freshwater Research, 61, 665-671.", "Victor, B.C. (2007) Coryphopterus kuna, a new goby (Perciformes: Gobiidae: Gobiinae) from the western Caribbean, with the identification of the late larval stage and an estimate of the pelagic larval duration. Zootaxa, 1526, 51-61.", "Victor, B.C., Hanner, R., Shivji, M., Hyde, J. & Caldow, C. (2009) Identification of the larval and juvenile stages of the Cubera Snapper, Lutjanus cyanopterus, using DNA barcoding. Zootaxa, 2215, 24-36."]}