Molecular and morphological description of a new species of Halisarca (Demospongiae: Halisarcida) from Mediterranean Sea and a redescription of the type species Halisarca dujardini

• Main Authors: Ereskovsky, Alexander V., Lavrov, Dennis V., Boury-Esnault, Nicole, Vacelet, Jean
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Zenodo 2011
• Subjects: Biodiversity; Taxonomy; Animalia; Porifera; Demospongiae; Chondrosida; Halisarcidae; Barents Sea; Blanche; Chalmers; De Gerlache; Duran; Genova; Gerlache; Hayward; Helgoland; Krylova; Leningradskogo Universiteta; Lopez; Murmansk; New Zealand; Okhotsk; Pacific; Queensland; Trott; Vestnik; Volkova; White Sea; Antarc*; Antarctique*
• Online Access: https://dx.doi.org/10.5281/zenodo.206842; https://zenodo.org/record/206842

Ereskovsky, Alexander V., Lavrov, Dennis V., Boury-Esnault, Nicole, Vacelet, Jean (2011): Molecular and morphological description of a new species of Halisarca (Demospongiae: Halisarcida) from Mediterranean Sea and a redescription of the type species Halisarca dujardini. Zootaxa 2768: 5-31, DOI: 10.5281/zenodo.206842 : {"references": ["Aisenshtadt, T.B. & Korotkova, G.P. (1976) A study of oogenesis in the marine sponge Halisarca dujardini. II. Phagocytic activity of the oocytes and vitellogenesis. Tsitologiya, 18, 818-823.", "Alander, H. (1942) Sponges from the Swedish west-coast and adjacent waters. University of Lund, Lund, 95 pp.", "Barrois, C.H. (1876) Embryologie de quelques eponges de la Manche. Annales des Sciences naturelles, 11, 1-84.", "Bergquist, P.R. (1996) The marine fauna of New Zealand. Porifera, Class Demospongiae. Part 5: Dendroceratida & Halisarcida. Memoirs of the New Zealand Oceanographic Institute, 107, 1-53.", "Bergquist, P.R. & Kelly, M. (2004) Taxonomy of some Halisarcida and Homosclerophorida (Porifera: Demospongiae) from the Indo-Pacific. New Zealand Journal of Marine and Freshwater Research, 38, 51-66.", "Bergquist, P.R. & Cook, S.C. (2002) Order Halisarcida Bergquist, 1996. In: Hooper, J.N.A. & Soest van, R.W.M. (Eds.), Systema Porifera: A guide to the classification of sponges, Kluwer Academic/Plenum Publishers, New York, pp. 1089.", "Blanquer, A. & Uriz, M-J. (2007) Cryptic speciation in marine sponges evidenced by mitochondrial and nuclear genes: A phylogenetic approach. Molecular Phylogenetics and Evolution, 45, 392-397.", "Borchiellini, C., Chombard, C., Manuel, M., Alivon, E., Vacelet, J. & Boury-Esnault, N. (2004) Molecular phylogeny of Demospongiae: implications for classification and scenarios of character evolution. Molecular Phylogenetics and Evolution, 32, 823-837.", "Borojevic, R., Cabioch, L. & Levi, C. (1968) Inventaire de la faune marine de Roscoff: Spongiaires. Robin & Mareuge, Paris, 43 pp.", "Boury-Esnault, N., De Vos, L., Donadey, C. & Vacelet, J. (1990) Ultrastructure of choanosome and sponge classification. In: Rutzler, K. (Ed.), New Perspectives in Sponge Biology, Smithsonian Institution Press, Washington, pp. 237-244.", "Boury-Esnault, N., Sole-Cava, A.M. & Thorpe, J.P. (1992) Genetic and cytological divergence betwen colour morphs of the Mediterranean sponge Oscarella lobularis Schmidt (Porifera, Demospongiae, Oscarellidae). Journal of Natural History, 26, 271-284.", "Boury-Esnault, N. & Sole-Cava, A.M. (2004) Recent contribution of genetic to the study of sponge systematics and biology. In: Pansini, M., Pronzato, R., Bavestrello, G. & Manconi, R. (Eds). Sponge science in the new millennium. Bollettino dei Musei e degli Instituti Biologici dell' Universita di Genova, 68, pp. 3-18.", "Bowerbank, J.S. (1866) A monograph of the British Spongiadae. Robert Hardwicke, London, 388 pp.", "Brunel, P., Bosse, L. & Lamarche G. (1998) Catalogue of the marine invertebrates of the estuary and Gulf of St. Lawrence. Canadian Special Publication of Fisheries and Aquatic Sciences, 126, 1-405.", "Burger, G., Lavrov, D.V., Forget, L. & Lang, B.F. (2007) Sequencing complete mitochondrial and plastid genomes. Nature Protocols, 2, 603-614.", "Chen, W.T. (1976) Reproduction and speciation in Halisarca. In: Harrison, F.W. & Cowden, R.R. (Eds.), Aspects of sponge biology, Academic Press, New York, pp. 113-140.", "Dujardin, F. (1838) Observations sur les eponges et en particulier sur la spongille ou eponge d'eau douce. Annales des Sciences naturelles, 10, 2-13.", "Duran, S. & Rutzler, K. (2006) Ecological speciation in a Caribbean marine sponge. Molecular Phylogenetics and Evolution, 40, 292-297.", "Ereskovsky, A.V. (1993) Addition to the fauna of sponges (Porifera) of the White Sea. Vestnik of St-Petersburg University, 2, 3- 12.", "Ereskovsky, A.V. (2000) Reproduction cycles and strategies of the cold-water sponges Halisarca dujardini (Demospongiae, Halisarcida), Myxilla incrustans and Iophon piceus (Demospongiae, Poecilosclerida) from the White Sea. Biological Bulletin, 198, 77-87.", "Ereskovsky, A.V. (2006) A new species of Oscarella (Demospongiae: Plakinidae) from the Western Sea of Japan. Zootaxa, 1376, 37-51.", "Ereskovsky, A.V. (2007) A new species of Halisarca (Demospongiae: Halisarcida) from the Sea of Okhotsk, North Pacific. Zootaxa, 1432, 57-66.", "Ereskovsky, A.V. (2010) The comparative embryology of sponges. Springer Verlag, Dordrecht, Heidelberg, London, New York, 329 + lix pp.", "Ereskovsky, A.V. & Gonobobleva, E.L. (2000) New data on embryonic development of Halisarca dujardini Johnston, 1842 (Demospongiae, Halisarcida). Zoosystema, 22, 355-368.", "Ereskovsky, A.V., Gonobobleva, E.L. & Vishnyakov, A.E. (2005) Morphological evidence for vertical transmission of symbiotic bacteria in the viviparous sponge Halisarca dujardini Johnston (Porifera, Demospongiae, Halisarcida). Marine Biology, 146, 869-875.", "Ereskovsky, A.V., Sanamyan, K. & Vishnyakov, A.E. (2009) A new species of the genus Oscarella (Porifera: Homosclerophorida: Plakinidae) from the North-West Pacific. Cahiers de Biologie Marine, 50, 369-381.", "Gonobobleva, E.L. & Ereskovsky, A.V. (2004a) Metamorphosis of the larva of Halisarca dujardini (Demospongiae, Halisarcida). Bulletin de l'Institut royal des Sciences naturelles de Belgique, Biologie, 74, 101-115.", "Gonobobleva, E.L. & Ereskovsky, A.V. (2004b) Polymorphism in free-swimming larvae of Halisarca dujardini (Demospongiae, Halisarcida). In: Pansini, M., Pronzato, R., Bavestrello, G. & Manconi, R., (Eds.), Sponge science in the new millennium. Bollettino dei Musei e degli Instituti Biologici dell' Universita di Genova, 68, pp. 349-356.", "Gonobobleva, E.L. & Maldonado, M. (2009) Choanocyte ultrastructure in Halisarca dujardini (Demospongiae, Halisarcida).", "Harmelin, J.-G., Boury-Esnault, N. & Vacelet, J. (1994) A bryozoan-sponge symbiosis: the association between Smittina cervicornis and Halisarca cf. dujardini in the Mediterranean. In: Hayward, P.J., Ryland J.S. & Taylor P.D. (Eds.), Biology and palaebiology of bryozoans, Olsen & Olsen, Fredensborg, pp. 69-74.", "Howson, C.M. & Picton, B.E. (1997) The species directory of the British marine fauna and flora. Coded checklist of the marine fauna and flora of the British Isles and its surrounding seas. Ulster Museum and The Marine Conservation Society, Belfast and Ross-on-Wye, 481 pp.", "Inglis, G., Gust, N., Fitridge, I., Floerl, O., Woods, C., Hayden, D. & Fenwick, G. (2006) Dunedin Harbour (Port Otago and Port Chalmers) Baseline survey for non-indigenous marine species (Research Project ZBS2000/4). Wellington, 104 pp.", "Johnston, G. (1842) A history of British sponges and lithophytes. Lizard, WH, Edinburgh, 264 pp.", "Klautau, M., Russo, C.A.M., Lazoski, C., Boury-Esnault, N., Thorpe, J.P. & Sole-Cava, A.M. (1999) Does cosmopolitanism result from overconservative systematics? A case study using the marine sponge Chondrilla nucula. Evolution, 53, 1414- 1422.", "Klautau, M., Sole-Cava, A.M. & Borojevic, R. (1994) Biochemical systematics of sibling sympatric species of Clathrina (Porifera: Calcarea). Biochemical Systematics and Ecology, 22, 367-375.", "Korotkova, G.P. & Apalkova, L.V. (1975) Oogenesis of the Barents Sea sponge Halisarca dujardini Johnston. In: Tokin, B.P., (Ed.), Comparative and experimental morphology of the sea organisms, Kola Filial Academy of Sciences USSR Press, Murmansk, pp. 9-26.", "Korotkova, G.P. & Aisenshtadt, T.B. (1976) A study of the oogenesis of the marine sponge Halisarca dujardini. Part 1. The origin of the oogonia and early stages of oocyte development. Tsitologiya, 18, 549-555.", "Korotkova, G.P. & Ermolina, N.O. (1982) The larval development of Halisarca dujardini (Demospongiae). Zoological Journal, 61, 1472-1480.", "Korotkova, G.P. & Ermolina, N.O. (1986a) The participation of specialized amoebocytes in the sexual embryogenesis of the White Sea sponge Halisarca dujardini Johnston. Biologicheskie Nauki, 5, 48-53.", "Korotkova, G.P. & Ermolina, N.O. (1986b) Destruction of embryos during the reproductive period in the White Sea sponge Halisarca dujardini Johnston (Demospongiae). Vestnik Leningradskogo Universiteta (Biologia), 4, 104-106.", "Korotkova, G.P. & Movchan N.A. (1973) The peculiarities of defensive-regenerational processes of the sponge Halisarca dujardini. Vestnik Leningradskogo Universiteta, 21, 16-25.", "Krylova, D.D., Aleshina, G.M., Kokryakov, V.N. & Ereskovsky, A.V. (2004) Antimicrobal propeties of mesohylar granular cells of Halisarca dujardini Johnston, 1842 Demospongiae, Halisarcida). In: Pansini, M., Pronzato, R., Bavestrello, G., & Manconi, R., (Eds.), Sponge science in the new millennium. Bollettino dei Musei e degli Instituti Biologici dell' Universita di Genova, 68, pp. 399-404.", "Larkin, M.A., Blackshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., Valentin, F., Wallace, I.M., Wilm, A., Lopez, R., Thompson, J.D., Gibson, T.J. & Higgins, D.G. (2007) Clustal W and Clustal X version 2.0. Bioinformatics, 23, 2947-2948.", "Lartillot, N. & Philippe, H. (2004) A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process. Molecular Biology and Evolution, 21, 1095-1109.", "Lartillot, N., Lepage, T. & Blanquart, S. (2009) PhyloBayes 3. A Bayesian software for phylogenetic reconstruction and molecular dating. Bioinformatics, 25, 2286-2288.", "Lavrov, D.V. (2010) Rapid proliferation of repetitive palindromic elements in mtDNA of the endemic baikalian sponge Lubomirskia baicalensis. Molecular Phylogeneny and Evolution, 27, 757-760.", "Lavrov, D.V., Wang, X. & Kelly, M. (2008) Reconstructing ordinal relationships in the Demospongiae using mitochondrial genomic data. Molecular Phylogeneny and Evolution, 49, 111-124.", "Laubenfels, M.W. de (1930) The Sponges of California. Stanford University Bulletin, 5, 24-29.", "Laubenfels, M.W. de (1948) The order Keratosa of the phylum Porifera. A monographic study. Allan Hancock Foundation Publications Occasional Paper, 3, 1-217.", "Laubenfels, M.W. de (1954) The sponges of the West-central Pacific. Oregon State Monographs, 7, 4-306.", "Lazoski, C., Sole-Cava, A.M., Boury-Esnault, N., Klautau, M. & Russo, C.A.M. (2001) Cryptic speciation in a high gene flow scenario in the oviparous marine sponge Chondrosia reniformis. Marine Biology, 139, 421-429.", "Lendenfeld, R. von (1886 [1885]) A Monograph of the Australian Sponges. Part V. The Auleninae. Proceedings of the Linnean Society of New South Wales, 10, 282-325, pls 26-35.", "Lendenfeld, R. von (1889) A monograph of the Horny Sponges. Trubner and Co, Ludgate Hill, EC, London, 936 pp.", "Levi, C. (1953) Halisarca metschnikovi n. sp. eponge sans squelette des cotes de France. Ses caracteres embryologiques (note preliminaire). Archives de Zoologie experimentale et generale, 90, 87-91.", "Levi, C. (1956) Etude des Halisarca de Roscoff. Embryologie et systematique des demosponges. Archives de Zoologie experimentale et generale, 93, 1-184.", "Little, F.J. (1963) The sponge fauna of the St. George's sound, Apalache Bay, and Panama city regions of the Florida Gulf coast. Tulane studies in Zoology, 11, 31-71.", "Loytynoja, A. & Milinkovitch, M.C. (2001) SOAP, cleaning multiple alignments from unstable blocks. Bioinformatics, 17, 573- 574.", "Merejkowsky, C.D. (1878) Les eponges de la mer Blanche. Memoires de l'Academie imperiales des Sciences de St Petersbourg, 26, 1-51.", "Metschnikoff, E. (1879) Spongiologische Studien. Zeitschrift fur Wissenschaftliche Zoologie, 32, 349-387.", "Meyer, M., Stenzel, U. & Hofreiter, M. (2008) Parallel tagged sequencing on the 454 platform. Nature Protocols, 3, 267-278.", "Muller, Y. (2004) Faune et flore du littoral du Nord, du Pas-de-Calais et de la Belgique: inventaire. [Coastal fauna and flora of the Nord, Pas-de-Calais and Belgium: inventory]. France, Pas-de-Calais : Commission Regionale de Biologie Region Nord.", "Muricy, G., Sole-Cava, A.M., Thorpe, J.P. & Boury-Esnault, N. (1996) Genetic evidence for extensive cryptic speciation in the subtidal sponge Plakina trilopha (Porifera, Demospongiae, Homoscleromorpha) from the Western Mediterranean. Marine Ecology Progress Series, 138, 181-187.", "Muricy, G. & Pearse, J.S. (2004) A New Species of Oscarella (Demospongiae: Plakinidae) from California. Proceedings of the California Academy of Sciences, 55, 598-612.", "Nichols, S.A. & Barnes, T.P.A. (2005) A molecular phylogeny and historical biogeography of the marine sponge genus Placospongia (Phylum Porifera) indicate low dispersal capabilities and widespread crypsis. Journal of Experimental Marine Biology and Ecology, 323, 1-15.", "Pallas, P.S. (1766) Elenchus Zoophytorum sistens generum adumbrationes generaliores et specierum cognitarum succinctas descriptiones cum selectis auctorum synonymis, Petrum van Cleef, 451 pp.", "Samaai, T. (2006) Biodiversity \"hotspots\", patterns of richness and endemism, and distribution of marine sponges in South Africa based on actual and interpolation data: A comparative approach. Zootaxa, 1358, 1-37.", "Sara, M. (1964) Poriferi di acque superficiali (0-3m) del litorale italiano. Annali del Pontificio Istituto superiore di Scienze e Lettere \"S Chiara\", 14, 299-317.", "Sole-Cava, A.M. & Boury-Esnault, N. (1999) Patterns of intra and interspecific genetic divergence in marine sponges. Memoirs of the Queensland Museum, 44, 591-602.", "Schmidt, O. (1862) Die Spongien des adriatischen Meeres. Leipzig, Wilhelm Engelmann, 88 pp.", "Schmidt, O. (1864) Supplement der Spongien des adriatischen Meeres. Enthaltend die Histologie und systematische Ergunzungen. Verlag von Wilhelm Engelmann, Leipzig, 44 pp.", "Simpson, T.L. (1984) The cell biology of sponges. Springer Verlag, New York, 662 pp.", "Soest, R.W.M. van., de Kluijver, M.J., Bragt, P.H. van., Faasse, M., Nijland, R., Beglinger, E.J., de Weerdt, W.H. & de Voogd, N.J. (2007) Sponge invaders in Dutch coastal waters. Journal of the Marine Biological Association of United Kingdom, 87, 1733-1748.", "Sukhodolskaya, A.N. & Krasukevitch, T.N. (1984) The effect of inozine on the development of Halisarca dujardini from small fragments of the body. Vestnik of Leningrad University, 3, 56-62.", "Topsent, E. (1893) Nouvelle serie de diagnoses d'eponges de Roscoff et de Banyuls Archives de Zoologie experimentale et generale, 1, 33-43.", "Topsent, E. (1901) Spongiaires. Resultats du voyage du S.Y. 'Belgica' en 1897-99 sous le commandement de A. de Gerlache de Gomery. Expedition antarctique belge. Zoologie, 4, 1-54, pls I-VI.", "Trott, T.J. (2004) Cobscook Bay inventory: a historical checklist of marine invertebrates spanning 162 years. Northeastern Naturalist, (Special Issue 2), 261-324.", "Uriz, M.J. (1984) Distribucion y afinidades biogeograficas de las esponjas corneas del litoral catalan. Investigacion Pesquera, 48, 51-58.", "Vacelet, J. (1959) Repartition generale des eponges et systematique des eponges cornees de la region de Marseille et de quelques stations mediterraneennes. Recueil des travaux de la Station Marine d'Endoume, 16, 39-101.", "Vacelet, J. & Donadey, C. (1987) A new species of Halisarca (Porifera, Demospongiae) from the Caribbean, with remarks on the cytology and affinities of the genus. In: Jones, W.C. (Ed.), European contributions to the taxonomy of sponges, Litho Press Co., Midleton, pp. 5-12.", "Vacelet, J., Vasseur, P. & Levi, C. (1976) Spongiaires de la pente externe des recifs coralliens de Tulear (Sud-Ouest de Madagascar). Memoires du Museum national d'Histoire naturelle, A, Zoologie, 49, 1-116.", "Vacelet, J., Boury-Esnault, N., De Vos, L. & Donadey, C. (1989) Comparative study of the choanosome of Porifera: II. The Keratose Sponges. Journal of Morphology, 201, 119-129.", "Vishnyakov, A.E. & Ereskovsky, A.V. (2009) Bacterial symbionts as an additional cytological marker for identification of sponges without a skeleton. Marine Biology, 156, 1625-1632.", "Volkova, M.A. & Zolotareva, G.A. (1981) The development of Halisarca dujardini Johnston from conglomerates of somatic cells. In: Korotkova, G.P., (Ed.), Morphogenesis in sponges, Leningrad University Press, Leningrad, pp. 74-92.", "Voultsiadou, E. (2005) Demosponge distribution in the eastern Mediterranean: a NW-SE gradient. Helgoland Marine Research, 59, 237-251.", "Worheide, G., Hooper, J.N.A. & Degnan, B.M. (2002) Phylogeography of western Pacific Leucetta 'chagosensis' (Porifera: Calcarea) from ribosomal DNA sequences: implications for population history and conservation of the Great Barrier Reef World Heritage Area (Australia). Molecular Ecology, 11, 1753-1768.", "Worheide, G., Degnan, B.M., Hooper, J.N.A. & Reitner, J. (2003) Phylogeography and taxonomy of the Indo-Pacific reef cave dwelling coralline demosponge Astrosclera 'willeyana': new data from nuclear internal transcribed spacer sequences. In: Moosa, K.M., Soemodihardjo, S., Nontji, A., Soegiarto, A., Romimohtarto, K., Sukarno, T. & Suharsona, A. (Eds.), Procedings of the 9th International Coral Reef Symposium. Jakarta, pp. 339-246.", "Worheide, G., Epp, L. & Macis, L. (2008) Deep genetic divergences among Indo-Pacific populations of the coral reef sponge Leucetta chagosensis (Leucettidae): founder effects, vicariance, or both? BMC Evolutionary Biology, 8, 24.", "Yang, Z. (2007) PAML 4: phylogenetic analysis by maximum likelihood. Molecular Biology and Evolution, 24, 1586-1591."]}