Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ...
(Uploaded by Plazi for the Bat Literature Project) Bats are a reservoir for a diverse range of viruses, including coronaviruses (CoVs). To determine the presence of CoVs in French bats, fecal samples were collected between July and August of 2014 from four bat species in seven different locations ar...
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Online Access: | https://dx.doi.org/10.5281/zenodo.13537832 https://zenodo.org/doi/10.5281/zenodo.13537832 |
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ftdatacite:10.5281/zenodo.13537832 2024-09-15T18:30:43+00:00 Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... Goffard, Anne Demanche, Christine Arthur, Laurent Pinçon, Claire Michaux, Johan Dubuisson, Jean 2015 https://dx.doi.org/10.5281/zenodo.13537832 https://zenodo.org/doi/10.5281/zenodo.13537832 unknown Zenodo hash://md5/26306d4cda99996e6c9c7667c4944356 hash://sha256/835a74719bbd37eb0ac080ca82a540744f15815b9827219273fb2765d99578a5 zotero://select/groups/5435545/items/3VGBYGFF https://zotero.org/groups/5435545/items/3VGBYGFF https://linker.bio/cut:hash://md5/a090d4b60b68ed2021e331b63277b0b2!/b10389-12945 hash://md5/26f7ce5dd404e33c6570edd4ba250d20 hash://md5/26306d4cda99996e6c9c7667c4944356 hash://sha256/835a74719bbd37eb0ac080ca82a540744f15815b9827219273fb2765d99578a5 zotero://select/groups/5435545/items/3VGBYGFF https://zotero.org/groups/5435545/items/3VGBYGFF https://linker.bio/cut:hash://md5/a090d4b60b68ed2021e331b63277b0b2!/b10389-12945 hash://md5/26f7ce5dd404e33c6570edd4ba250d20 https://dx.doi.org/10.5281/zenodo.1410543 https://dx.doi.org/10.5281/zenodo.13537831 Animals Chiroptera Cluster Analysis Coronavirus Coronavirus Infections Europe Feces France Phylogeography Prevalence RNA Replicase RNA, Viral Sequence Analysis, DNA Sequence Homology alphacoronavirus bats coronavirus molecular characterization phylogenetic analysis phylogeographic analysis Biodiversity Mammalia Chordata Animalia bat JournalArticle ScholarlyArticle article-journal 2015 ftdatacite https://doi.org/10.5281/zenodo.1353783210.5281/zenodo.141054310.5281/zenodo.13537831 2024-09-02T10:19:47Z (Uploaded by Plazi for the Bat Literature Project) Bats are a reservoir for a diverse range of viruses, including coronaviruses (CoVs). To determine the presence of CoVs in French bats, fecal samples were collected between July and August of 2014 from four bat species in seven different locations around the city of Bourges in France. We present for the first time the presence of alpha-CoVs in French Pipistrellus pipistrellus bat species with an estimated prevalence of 4.2%. Based on the analysis of a fragment of the RNA-dependent RNA polymerase (RdRp) gene, phylogenetic analyses show that alpha-CoVs sequences detected in French bats are closely related to other European bat alpha-CoVs. Phylogeographic analyses of RdRp sequences show that several CoVs strains circulate in European bats: (i) old strains detected that have probably diverged a long time ago and are detected in different bat subspecies; (ii) strains detected in Myotis and Pipistrellus bat species that have more recently diverged. Our findings ... Article in Journal/Newspaper Pipistrellus pipistrellus DataCite |
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Animals Chiroptera Cluster Analysis Coronavirus Coronavirus Infections Europe Feces France Phylogeography Prevalence RNA Replicase RNA, Viral Sequence Analysis, DNA Sequence Homology alphacoronavirus bats coronavirus molecular characterization phylogenetic analysis phylogeographic analysis Biodiversity Mammalia Chordata Animalia bat |
spellingShingle |
Animals Chiroptera Cluster Analysis Coronavirus Coronavirus Infections Europe Feces France Phylogeography Prevalence RNA Replicase RNA, Viral Sequence Analysis, DNA Sequence Homology alphacoronavirus bats coronavirus molecular characterization phylogenetic analysis phylogeographic analysis Biodiversity Mammalia Chordata Animalia bat Goffard, Anne Demanche, Christine Arthur, Laurent Pinçon, Claire Michaux, Johan Dubuisson, Jean Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... |
topic_facet |
Animals Chiroptera Cluster Analysis Coronavirus Coronavirus Infections Europe Feces France Phylogeography Prevalence RNA Replicase RNA, Viral Sequence Analysis, DNA Sequence Homology alphacoronavirus bats coronavirus molecular characterization phylogenetic analysis phylogeographic analysis Biodiversity Mammalia Chordata Animalia bat |
description |
(Uploaded by Plazi for the Bat Literature Project) Bats are a reservoir for a diverse range of viruses, including coronaviruses (CoVs). To determine the presence of CoVs in French bats, fecal samples were collected between July and August of 2014 from four bat species in seven different locations around the city of Bourges in France. We present for the first time the presence of alpha-CoVs in French Pipistrellus pipistrellus bat species with an estimated prevalence of 4.2%. Based on the analysis of a fragment of the RNA-dependent RNA polymerase (RdRp) gene, phylogenetic analyses show that alpha-CoVs sequences detected in French bats are closely related to other European bat alpha-CoVs. Phylogeographic analyses of RdRp sequences show that several CoVs strains circulate in European bats: (i) old strains detected that have probably diverged a long time ago and are detected in different bat subspecies; (ii) strains detected in Myotis and Pipistrellus bat species that have more recently diverged. Our findings ... |
format |
Article in Journal/Newspaper |
author |
Goffard, Anne Demanche, Christine Arthur, Laurent Pinçon, Claire Michaux, Johan Dubuisson, Jean |
author_facet |
Goffard, Anne Demanche, Christine Arthur, Laurent Pinçon, Claire Michaux, Johan Dubuisson, Jean |
author_sort |
Goffard, Anne |
title |
Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... |
title_short |
Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... |
title_full |
Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... |
title_fullStr |
Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... |
title_full_unstemmed |
Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats ... |
title_sort |
alphacoronaviruses detected in french bats are phylogeographically linked to coronaviruses of european bats ... |
publisher |
Zenodo |
publishDate |
2015 |
url |
https://dx.doi.org/10.5281/zenodo.13537832 https://zenodo.org/doi/10.5281/zenodo.13537832 |
genre |
Pipistrellus pipistrellus |
genre_facet |
Pipistrellus pipistrellus |
op_relation |
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op_doi |
https://doi.org/10.5281/zenodo.1353783210.5281/zenodo.141054310.5281/zenodo.13537831 |
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1810472234257481728 |