Genome sequence of an aichivirus detected in a common pipistrelle bat (Pipistrellus pipistrellus) ...

• Main Authors: Diakoudi, Georgia, Jamnikar-Ciglenečki, Urška, Lanave, Gianvito, Lelli, Davide, Martella, Vito, Kuhar, Urška
• Format: Article in Journal/Newspaper
• Language: unknown
• Published: Zenodo 2020
• Subjects: Biodiversity; Mammalia; Chiroptera; Chordata; Animalia; bats; bat; Pipistrellus pipistrellus
• Online Access: https://dx.doi.org/10.5281/zenodo.13461762; https://zenodo.org/doi/10.5281/zenodo.13461762

(Uploaded by Plazi for the Bat Literature Project) The family Picornaviridae includes important human and animal pathogens that are associated with a wide range of diseases and, in some cases, have zoonotic potential. During epidemiological surveillance of bats, we identified, by next-generation sequencing (NGS) techniques, the presence of picornavirus RNA in a common pipistrelle bat (Pipistrellus pipistrellus). By coupling NGS, primer-walking strategies, and sequence-independent protocols to obtain the sequences of the 5′ and 3′ termini, we reconstructed the genome sequence of picornavirus strain ITA/2017/189/18-155. The genome of the bat picornavirus is 8.2 kb in length and encodes a polyprotein of 2462 amino acids. A comparison of polyprotein sequences revealed that this virus is distantly related (65.1% and 70.9% sequence identity at the nucleotide and amino acid level, respectively) to a bat aichivirus identified in 2010. Phylogenetic analysis showed that this picornavirus clustered closely with members ...