Dataset of origins of replication in circular prokaryotic chromosomes ...
This dataset includes two files downloaded from the DoriC 12.0 database [1] and one file with experimentally verified origins of replications (oriCs). The two DoriC files describe oriCs of circular chromosomes predicted with Ori-Finder on complete and chromosome level assemblies. The experimental_da...
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Online Access: | https://dx.doi.org/10.5281/zenodo.10888580 https://zenodo.org/doi/10.5281/zenodo.10888580 |
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ftdatacite:10.5281/zenodo.10888580 2024-04-28T08:35:13+00:00 Dataset of origins of replication in circular prokaryotic chromosomes ... van Meel, Zoya 2024 https://dx.doi.org/10.5281/zenodo.10888580 https://zenodo.org/doi/10.5281/zenodo.10888580 unknown Zenodo https://dx.doi.org/10.5281/zenodo.10888581 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 dataset Dataset 2024 ftdatacite https://doi.org/10.5281/zenodo.1088858010.5281/zenodo.10888581 2024-04-02T12:47:33Z This dataset includes two files downloaded from the DoriC 12.0 database [1] and one file with experimentally verified origins of replications (oriCs). The two DoriC files describe oriCs of circular chromosomes predicted with Ori-Finder on complete and chromosome level assemblies. The experimental_dataset file is a describes a set of experimentally verified oriCs, including accession numbers and and sources, collected via literature review. The oriC_number column is used in the case of bipartite origins. These files were used in the development of ORCA: https://github.com/ZoyavanMeel/ORCA. [1] Mei-Jing Dong, Hao Luo and Feng Gao, DoriC 12.0: an updated database of replication origins in both complete and draft prokaryotic genomes, Nucleic Acid Research, 2023, doi: 10.1093/nar/gkac964. ... Dataset Orca DataCite Metadata Store (German National Library of Science and Technology) |
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Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
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ftdatacite |
language |
unknown |
description |
This dataset includes two files downloaded from the DoriC 12.0 database [1] and one file with experimentally verified origins of replications (oriCs). The two DoriC files describe oriCs of circular chromosomes predicted with Ori-Finder on complete and chromosome level assemblies. The experimental_dataset file is a describes a set of experimentally verified oriCs, including accession numbers and and sources, collected via literature review. The oriC_number column is used in the case of bipartite origins. These files were used in the development of ORCA: https://github.com/ZoyavanMeel/ORCA. [1] Mei-Jing Dong, Hao Luo and Feng Gao, DoriC 12.0: an updated database of replication origins in both complete and draft prokaryotic genomes, Nucleic Acid Research, 2023, doi: 10.1093/nar/gkac964. ... |
format |
Dataset |
author |
van Meel, Zoya |
spellingShingle |
van Meel, Zoya Dataset of origins of replication in circular prokaryotic chromosomes ... |
author_facet |
van Meel, Zoya |
author_sort |
van Meel, Zoya |
title |
Dataset of origins of replication in circular prokaryotic chromosomes ... |
title_short |
Dataset of origins of replication in circular prokaryotic chromosomes ... |
title_full |
Dataset of origins of replication in circular prokaryotic chromosomes ... |
title_fullStr |
Dataset of origins of replication in circular prokaryotic chromosomes ... |
title_full_unstemmed |
Dataset of origins of replication in circular prokaryotic chromosomes ... |
title_sort |
dataset of origins of replication in circular prokaryotic chromosomes ... |
publisher |
Zenodo |
publishDate |
2024 |
url |
https://dx.doi.org/10.5281/zenodo.10888580 https://zenodo.org/doi/10.5281/zenodo.10888580 |
genre |
Orca |
genre_facet |
Orca |
op_relation |
https://dx.doi.org/10.5281/zenodo.10888581 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.5281/zenodo.1088858010.5281/zenodo.10888581 |
_version_ |
1797567368830910464 |