Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ...
This dataset supports the thesis entitled “Patterns of Diversity, Connectivity, and Evolution in Southern Ocean and Deep-Sea Annelids” by Regan Drennan AWARDED BY: University of Southampton DATE OF AWARD: 2024 DESCRIPTION OF THE DATA: Genomic data generated in thesis Chapter 5: Population genomics,...
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Online Access: | https://dx.doi.org/10.5281/zenodo.10606640 https://zenodo.org/doi/10.5281/zenodo.10606640 |
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ftdatacite:10.5281/zenodo.10606640 2024-03-31T07:55:26+00:00 Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... Drennan, Regan Taboada, Sergio Glover, Adrian G Dahlgren, Thomas G Linse, Katrin Copley, Jon Arias, Maria Belen 2024 https://dx.doi.org/10.5281/zenodo.10606640 https://zenodo.org/doi/10.5281/zenodo.10606640 unknown Zenodo https://dx.doi.org/10.5281/zenodo.10606641 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 dataset Dataset 2024 ftdatacite https://doi.org/10.5281/zenodo.1060664010.5281/zenodo.10606641 2024-03-04T11:30:40Z This dataset supports the thesis entitled “Patterns of Diversity, Connectivity, and Evolution in Southern Ocean and Deep-Sea Annelids” by Regan Drennan AWARDED BY: University of Southampton DATE OF AWARD: 2024 DESCRIPTION OF THE DATA: Genomic data generated in thesis Chapter 5: Population genomics, cryptic diversity and phylogeographic structure in the Southern Ocean circumpolar annelid, Aglaophamus trissophyllus (Annelida: Nephtyidae) Single nucleotide polymorphism (SNP) genomic data was prepared and sequenced using a ddRADseq library preparation protocol (see Chapter 5 Results section 5.2.5 for more details). Following sequencing, filtering and locus assembly was carried out using Stacks v 2.64 https://catchenlab.life.illinois.edu/stacks/ - Stacks generates a catalog to determine which haplotype alleles are present at every locus in each individual. This dataset includes all catalogs analysed in thesis Chapter 5 following initial QC, processing, and quality filtering steps (see Chapter 5 Results section ... Dataset Southern Ocean DataCite Metadata Store (German National Library of Science and Technology) Southern Ocean |
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Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
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ftdatacite |
language |
unknown |
description |
This dataset supports the thesis entitled “Patterns of Diversity, Connectivity, and Evolution in Southern Ocean and Deep-Sea Annelids” by Regan Drennan AWARDED BY: University of Southampton DATE OF AWARD: 2024 DESCRIPTION OF THE DATA: Genomic data generated in thesis Chapter 5: Population genomics, cryptic diversity and phylogeographic structure in the Southern Ocean circumpolar annelid, Aglaophamus trissophyllus (Annelida: Nephtyidae) Single nucleotide polymorphism (SNP) genomic data was prepared and sequenced using a ddRADseq library preparation protocol (see Chapter 5 Results section 5.2.5 for more details). Following sequencing, filtering and locus assembly was carried out using Stacks v 2.64 https://catchenlab.life.illinois.edu/stacks/ - Stacks generates a catalog to determine which haplotype alleles are present at every locus in each individual. This dataset includes all catalogs analysed in thesis Chapter 5 following initial QC, processing, and quality filtering steps (see Chapter 5 Results section ... |
format |
Dataset |
author |
Drennan, Regan Taboada, Sergio Glover, Adrian G Dahlgren, Thomas G Linse, Katrin Copley, Jon Arias, Maria Belen |
spellingShingle |
Drennan, Regan Taboada, Sergio Glover, Adrian G Dahlgren, Thomas G Linse, Katrin Copley, Jon Arias, Maria Belen Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... |
author_facet |
Drennan, Regan Taboada, Sergio Glover, Adrian G Dahlgren, Thomas G Linse, Katrin Copley, Jon Arias, Maria Belen |
author_sort |
Drennan, Regan |
title |
Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... |
title_short |
Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... |
title_full |
Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... |
title_fullStr |
Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... |
title_full_unstemmed |
Drennan 2024 Doctoral Thesis Chapter 5 dataset - SNP catalogs ... |
title_sort |
drennan 2024 doctoral thesis chapter 5 dataset - snp catalogs ... |
publisher |
Zenodo |
publishDate |
2024 |
url |
https://dx.doi.org/10.5281/zenodo.10606640 https://zenodo.org/doi/10.5281/zenodo.10606640 |
geographic |
Southern Ocean |
geographic_facet |
Southern Ocean |
genre |
Southern Ocean |
genre_facet |
Southern Ocean |
op_relation |
https://dx.doi.org/10.5281/zenodo.10606641 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.5281/zenodo.1060664010.5281/zenodo.10606641 |
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1795037295050489856 |