Table S6 (Excel): Differential expression.
Genes differentially expressed between Atlantic and Mediterranean samples under control (Tab. S6a) , stress (Tab. S6b), and recovery conditions (Tab. S6c); and genes differentially exprelssed between Northern and Southern samples under control (Tab. S6d), stress (Tab. S6e) and recovery conditions (T...
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ftdatacite:10.5061/dryad.vf5fk/6 2023-05-15T17:33:28+02:00 Table S6 (Excel): Differential expression. Jueterbock, Alexander Franssen, Susanne U. Bergmann, Nina Gu, Jenny Coyer, James A. Reusch, Thorsten B.H. Bornberg-Bauer, Erich Olsen, Jeanine L. 2016 https://dx.doi.org/10.5061/dryad.vf5fk/6 http://datadryad.org/resource/doi:10.5061/dryad.vf5fk/6 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.vf5fk http://creativecommons.org/publicdomain/zero/1.0 CC0 RNAseq Heatwave Global warming Transcriptomics Common-garden experiment Differential expression North Atlantic Zostera marina dataset Dataset DataFile 2016 ftdatacite https://doi.org/10.5061/dryad.vf5fk/6 https://doi.org/10.5061/dryad.vf5fk 2021-11-05T12:55:41Z Genes differentially expressed between Atlantic and Mediterranean samples under control (Tab. S6a) , stress (Tab. S6b), and recovery conditions (Tab. S6c); and genes differentially exprelssed between Northern and Southern samples under control (Tab. S6d), stress (Tab. S6e) and recovery conditions (Tab. S6f). Each row represents one gene with: ZosmaID (gene ID based on the Zostera marina genome annotation v2.1, GenBank Accession: LFYR00000000); mRNAID, the mapped sequence ID; Source, the source of annotation (inference from homology or top BLAST hit); Description, the gene description; baseMean, the mean of normalized counts for all samples; log2FoldChange, the log2 fold difference in normalized expression between Atlantic and Mediterranean (Tab. S6a-c) or between Northern and Southern samples (Tab. S6d-f, values > 1 indicate higher expression in Mediterranean/Southern samples); lfcSE, the standard error of the log2 fold difference; stat, the Wald test statistic for differential expression; pvalue, the p-value; padj, the p-value adjusted by the Benjamini-Hochberg method to control for false discovery rate; sdcol, the standard deviation of expression counts that were normalized by size factors for all samples; followed the regularized log-transformed expression values of all samples that were included in the test. Dataset North Atlantic DataCite Metadata Store (German National Library of Science and Technology) |
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DataCite Metadata Store (German National Library of Science and Technology) |
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unknown |
topic |
RNAseq Heatwave Global warming Transcriptomics Common-garden experiment Differential expression North Atlantic Zostera marina |
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RNAseq Heatwave Global warming Transcriptomics Common-garden experiment Differential expression North Atlantic Zostera marina Jueterbock, Alexander Franssen, Susanne U. Bergmann, Nina Gu, Jenny Coyer, James A. Reusch, Thorsten B.H. Bornberg-Bauer, Erich Olsen, Jeanine L. Table S6 (Excel): Differential expression. |
topic_facet |
RNAseq Heatwave Global warming Transcriptomics Common-garden experiment Differential expression North Atlantic Zostera marina |
description |
Genes differentially expressed between Atlantic and Mediterranean samples under control (Tab. S6a) , stress (Tab. S6b), and recovery conditions (Tab. S6c); and genes differentially exprelssed between Northern and Southern samples under control (Tab. S6d), stress (Tab. S6e) and recovery conditions (Tab. S6f). Each row represents one gene with: ZosmaID (gene ID based on the Zostera marina genome annotation v2.1, GenBank Accession: LFYR00000000); mRNAID, the mapped sequence ID; Source, the source of annotation (inference from homology or top BLAST hit); Description, the gene description; baseMean, the mean of normalized counts for all samples; log2FoldChange, the log2 fold difference in normalized expression between Atlantic and Mediterranean (Tab. S6a-c) or between Northern and Southern samples (Tab. S6d-f, values > 1 indicate higher expression in Mediterranean/Southern samples); lfcSE, the standard error of the log2 fold difference; stat, the Wald test statistic for differential expression; pvalue, the p-value; padj, the p-value adjusted by the Benjamini-Hochberg method to control for false discovery rate; sdcol, the standard deviation of expression counts that were normalized by size factors for all samples; followed the regularized log-transformed expression values of all samples that were included in the test. |
format |
Dataset |
author |
Jueterbock, Alexander Franssen, Susanne U. Bergmann, Nina Gu, Jenny Coyer, James A. Reusch, Thorsten B.H. Bornberg-Bauer, Erich Olsen, Jeanine L. |
author_facet |
Jueterbock, Alexander Franssen, Susanne U. Bergmann, Nina Gu, Jenny Coyer, James A. Reusch, Thorsten B.H. Bornberg-Bauer, Erich Olsen, Jeanine L. |
author_sort |
Jueterbock, Alexander |
title |
Table S6 (Excel): Differential expression. |
title_short |
Table S6 (Excel): Differential expression. |
title_full |
Table S6 (Excel): Differential expression. |
title_fullStr |
Table S6 (Excel): Differential expression. |
title_full_unstemmed |
Table S6 (Excel): Differential expression. |
title_sort |
table s6 (excel): differential expression. |
publisher |
Dryad Digital Repository |
publishDate |
2016 |
url |
https://dx.doi.org/10.5061/dryad.vf5fk/6 http://datadryad.org/resource/doi:10.5061/dryad.vf5fk/6 |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
https://dx.doi.org/10.5061/dryad.vf5fk |
op_rights |
http://creativecommons.org/publicdomain/zero/1.0 |
op_rightsnorm |
CC0 |
op_doi |
https://doi.org/10.5061/dryad.vf5fk/6 https://doi.org/10.5061/dryad.vf5fk |
_version_ |
1766131984672751616 |