vcf_genotypes_4372_SNPs

VCF file containing filtered polymorphic SNPs from 2bRAD sequencing. The file contains the genotypes of 4372 SNPs typed in 240 individuals, from 6 population samples. The population codes are FKH=Flatanger, SMAU=Austevoll, SMID=Stavanger, SMTF=Kristiansand, SMST=Strömstad and SMKB=Kungsbacka. Follow...

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Bibliographic Details
Main Authors: Faust, Ellika, Halvorsen, Kim T, Andersen, Per, Knutsen, Halvor, Carl, André
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2018
Subjects:
Aquaculture
Wrasse
Sea lice
Hybrid
RAD
Salmon
2bRAD
North Sea
Skagerrak
Kattegat
Sweden
Norway
Flatanger
Norwegian Sea
Symphodus melops
Labridae
Crenilabrus melops
Online Access:https://dx.doi.org/10.5061/dryad.tv553/2
http://datadryad.org/resource/doi:10.5061/dryad.tv553/2
Description
Summary:VCF file containing filtered polymorphic SNPs from 2bRAD sequencing. The file contains the genotypes of 4372 SNPs typed in 240 individuals, from 6 population samples. The population codes are FKH=Flatanger, SMAU=Austevoll, SMID=Stavanger, SMTF=Kristiansand, SMST=Strömstad and SMKB=Kungsbacka. Following loci vere removed in later analysis due to HW deviations as stated in associated paper. locus56691 locus38851 locus64904 locus43866 locus70853 locus45067 locus33903 locus31804 locus60160 locus51060 locus67817 locus41336 locus61157 locus40922 locus68635

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