Filtered sequencing data (MOTUs) for fungal metabarcode

This table contains filtered MOTUs for the fungal metabarcode. Amplicons were amplified using ITS5 : 5'-GGAAGTAAAAGTCGTAACAAGG-3' (White et al. 1990) and 5.8S_fungi : 5'- CAAGAGATCCGTTGTTGAAAGTT-3' primers (Epp et al. 2012). Sequences were obtained by a 2 x 250 bp paired-end sequ...

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Bibliographic Details
Main Authors: Pansu, Johan, Winkworth, Richard C., Hennion, Françoise, Gielly, Ludovic, Taberlet, Pierre, Choler, Philippe
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2015
Subjects:
Online Access:https://dx.doi.org/10.5061/dryad.t8534/4
http://datadryad.org/resource/doi:10.5061/dryad.t8534/4
id ftdatacite:10.5061/dryad.t8534/4
record_format openpolar
spelling ftdatacite:10.5061/dryad.t8534/4 2023-05-15T13:53:29+02:00 Filtered sequencing data (MOTUs) for fungal metabarcode Pansu, Johan Winkworth, Richard C. Hennion, Françoise Gielly, Ludovic Taberlet, Pierre Choler, Philippe 2015 https://dx.doi.org/10.5061/dryad.t8534/4 http://datadryad.org/resource/doi:10.5061/dryad.t8534/4 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.t8534 http://creativecommons.org/publicdomain/zero/1.0 CC0 Environmental DNA Invasive species Metabarcoding Soil communities Kerguelen Islands Sub-Antarctic Islands Fungi dataset Dataset DataFile 2015 ftdatacite https://doi.org/10.5061/dryad.t8534/4 https://doi.org/10.5061/dryad.t8534 2021-11-05T12:55:41Z This table contains filtered MOTUs for the fungal metabarcode. Amplicons were amplified using ITS5 : 5'-GGAAGTAAAAGTCGTAACAAGG-3' (White et al. 1990) and 5.8S_fungi : 5'- CAAGAGATCCGTTGTTGAAAGTT-3' primers (Epp et al. 2012). Sequences were obtained by a 2 x 250 bp paired-end sequencing on Illumina MiSeq platform. Data filtering and MOTUs clustering were performed according to the procedure described in the supplementary materials of Pansu et al. (2015): 'Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago'. Dataset Antarc* Antarctic Kerguelen Islands DataCite Metadata Store (German National Library of Science and Technology) Antarctic Kerguelen Kerguelen Islands
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Environmental DNA
Invasive species
Metabarcoding
Soil communities
Kerguelen Islands
Sub-Antarctic Islands
Fungi
spellingShingle Environmental DNA
Invasive species
Metabarcoding
Soil communities
Kerguelen Islands
Sub-Antarctic Islands
Fungi
Pansu, Johan
Winkworth, Richard C.
Hennion, Françoise
Gielly, Ludovic
Taberlet, Pierre
Choler, Philippe
Filtered sequencing data (MOTUs) for fungal metabarcode
topic_facet Environmental DNA
Invasive species
Metabarcoding
Soil communities
Kerguelen Islands
Sub-Antarctic Islands
Fungi
description This table contains filtered MOTUs for the fungal metabarcode. Amplicons were amplified using ITS5 : 5'-GGAAGTAAAAGTCGTAACAAGG-3' (White et al. 1990) and 5.8S_fungi : 5'- CAAGAGATCCGTTGTTGAAAGTT-3' primers (Epp et al. 2012). Sequences were obtained by a 2 x 250 bp paired-end sequencing on Illumina MiSeq platform. Data filtering and MOTUs clustering were performed according to the procedure described in the supplementary materials of Pansu et al. (2015): 'Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago'.
format Dataset
author Pansu, Johan
Winkworth, Richard C.
Hennion, Françoise
Gielly, Ludovic
Taberlet, Pierre
Choler, Philippe
author_facet Pansu, Johan
Winkworth, Richard C.
Hennion, Françoise
Gielly, Ludovic
Taberlet, Pierre
Choler, Philippe
author_sort Pansu, Johan
title Filtered sequencing data (MOTUs) for fungal metabarcode
title_short Filtered sequencing data (MOTUs) for fungal metabarcode
title_full Filtered sequencing data (MOTUs) for fungal metabarcode
title_fullStr Filtered sequencing data (MOTUs) for fungal metabarcode
title_full_unstemmed Filtered sequencing data (MOTUs) for fungal metabarcode
title_sort filtered sequencing data (motus) for fungal metabarcode
publisher Dryad Digital Repository
publishDate 2015
url https://dx.doi.org/10.5061/dryad.t8534/4
http://datadryad.org/resource/doi:10.5061/dryad.t8534/4
geographic Antarctic
Kerguelen
Kerguelen Islands
geographic_facet Antarctic
Kerguelen
Kerguelen Islands
genre Antarc*
Antarctic
Kerguelen Islands
genre_facet Antarc*
Antarctic
Kerguelen Islands
op_relation https://dx.doi.org/10.5061/dryad.t8534
op_rights http://creativecommons.org/publicdomain/zero/1.0
op_rightsnorm CC0
op_doi https://doi.org/10.5061/dryad.t8534/4
https://doi.org/10.5061/dryad.t8534
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