Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ...
Our ability to examine genetic variation across entire genomes have enabled many studies searching for the genetic basis of local adaptation. These studies have identified numerous loci as candidates for differential local selection, however relatively few have examined the overlap among candidate l...
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Online Access: | https://dx.doi.org/10.5061/dryad.sn02v6x2t https://datadryad.org/stash/dataset/doi:10.5061/dryad.sn02v6x2t |
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ftdatacite:10.5061/dryad.sn02v6x2t 2024-10-13T14:06:03+00:00 Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... Zueva, Ksenia Lumme, Jaakko Veselov, Alexey Primmer, Craig Pritchard, Victoria 2020 https://dx.doi.org/10.5061/dryad.sn02v6x2t https://datadryad.org/stash/dataset/doi:10.5061/dryad.sn02v6x2t en eng Dryad https://dx.doi.org/10.1111/mec.14705 https://dx.doi.org/10.1016/j.margen.2018.01.001 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 FOS: Biological sciences Russia Local adapation major effect gene allelotying SNP chip Dataset dataset 2020 ftdatacite https://doi.org/10.5061/dryad.sn02v6x2t10.1111/mec.1470510.1016/j.margen.2018.01.001 2024-10-01T11:12:04Z Our ability to examine genetic variation across entire genomes have enabled many studies searching for the genetic basis of local adaptation. These studies have identified numerous loci as candidates for differential local selection, however relatively few have examined the overlap among candidate loci identified from independent studies of the same species in different geographic areas or evolutionary lineages. We used an allelotyping approach with a 220K SNP array to characterize the population genetic structure of Atlantic salmon in northeastern Europe and ask whether the same genomic segments emerged as outliers among populations in different geographic regions. Genome-wide data recapitulated the phylogeographic structure previously inferred from mtDNA and microsatellite markers. Independent analyses of three genetically and geographically distinct groups of populations repeatedly inferred the same 17 haploblocks to contain loci under differential local selection. The most strongly supported of these ... : See associated manuscript. ... Dataset Atlantic salmon DataCite |
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Open Polar |
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English |
topic |
FOS: Biological sciences Russia Local adapation major effect gene allelotying SNP chip |
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FOS: Biological sciences Russia Local adapation major effect gene allelotying SNP chip Zueva, Ksenia Lumme, Jaakko Veselov, Alexey Primmer, Craig Pritchard, Victoria Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... |
topic_facet |
FOS: Biological sciences Russia Local adapation major effect gene allelotying SNP chip |
description |
Our ability to examine genetic variation across entire genomes have enabled many studies searching for the genetic basis of local adaptation. These studies have identified numerous loci as candidates for differential local selection, however relatively few have examined the overlap among candidate loci identified from independent studies of the same species in different geographic areas or evolutionary lineages. We used an allelotyping approach with a 220K SNP array to characterize the population genetic structure of Atlantic salmon in northeastern Europe and ask whether the same genomic segments emerged as outliers among populations in different geographic regions. Genome-wide data recapitulated the phylogeographic structure previously inferred from mtDNA and microsatellite markers. Independent analyses of three genetically and geographically distinct groups of populations repeatedly inferred the same 17 haploblocks to contain loci under differential local selection. The most strongly supported of these ... : See associated manuscript. ... |
format |
Dataset |
author |
Zueva, Ksenia Lumme, Jaakko Veselov, Alexey Primmer, Craig Pritchard, Victoria |
author_facet |
Zueva, Ksenia Lumme, Jaakko Veselov, Alexey Primmer, Craig Pritchard, Victoria |
author_sort |
Zueva, Ksenia |
title |
Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... |
title_short |
Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... |
title_full |
Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... |
title_fullStr |
Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... |
title_full_unstemmed |
Population genomics reveals repeated signals of adaptive divergence in the Atlantic salmon of northeastern Europe ... |
title_sort |
population genomics reveals repeated signals of adaptive divergence in the atlantic salmon of northeastern europe ... |
publisher |
Dryad |
publishDate |
2020 |
url |
https://dx.doi.org/10.5061/dryad.sn02v6x2t https://datadryad.org/stash/dataset/doi:10.5061/dryad.sn02v6x2t |
genre |
Atlantic salmon |
genre_facet |
Atlantic salmon |
op_relation |
https://dx.doi.org/10.1111/mec.14705 https://dx.doi.org/10.1016/j.margen.2018.01.001 |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.sn02v6x2t10.1111/mec.1470510.1016/j.margen.2018.01.001 |
_version_ |
1812812094535368704 |