CanineHD 230 K BeadChip data from Pembroke Welsh corgi ...
Several hundred disease-causing mutations are currently known in domestic dogs. Breeding management is therefore required to minimize their spread. Recently, genetic methods such as direct-to-consumer testing have gained popularity; however, their effects on dog populations are unclear. Here, we aim...
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Online Access: | https://dx.doi.org/10.5061/dryad.rbnzs7hhk https://datadryad.org/stash/dataset/doi:10.5061/dryad.rbnzs7hhk |
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ftdatacite:10.5061/dryad.rbnzs7hhk 2024-02-04T09:59:30+01:00 CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... Matsumoto, Yuki 2023 https://dx.doi.org/10.5061/dryad.rbnzs7hhk https://datadryad.org/stash/dataset/doi:10.5061/dryad.rbnzs7hhk en eng Dryad Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 FOS Animal and dairy science Canis lupus familiaris domestic dog BeadChip SNP array Dataset dataset 2023 ftdatacite https://doi.org/10.5061/dryad.rbnzs7hhk 2024-01-05T00:46:51Z Several hundred disease-causing mutations are currently known in domestic dogs. Breeding management is therefore required to minimize their spread. Recently, genetic methods such as direct-to-consumer testing have gained popularity; however, their effects on dog populations are unclear. Here, we aimed to evaluate the influence of genetic testing on the frequency of mutations responsible for canine degenerative myelopathy (DM) and assess the changes in the genetic structure of a Pembroke Welsh corgi population from Japan. To evaluate the influence of genetic testing on the frequency of mutations causing canine degenerative myelopathy and changes to genetic structure in the Pembroke Welsh corgi population from Japan, 117 dogs were genotyped. Weir and Cockerham population differentiation (FST) based on genome-wide single-nucleotide polymorphism (SNP) detected the SNP with the highest FST located in the intron of SOD1 adjacent to the c.118G>A mutation, supporting a selection signature on SOD1. Further ... : 142,510 single nucleotide polymorphism (SNP) of 112 dogs by using Illumina's Canine 230K Consortium chip. ... Dataset Canis lupus DataCite Metadata Store (German National Library of Science and Technology) Weir ENVELOPE(177.167,177.167,-84.983,-84.983) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
FOS Animal and dairy science Canis lupus familiaris domestic dog BeadChip SNP array |
spellingShingle |
FOS Animal and dairy science Canis lupus familiaris domestic dog BeadChip SNP array Matsumoto, Yuki CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... |
topic_facet |
FOS Animal and dairy science Canis lupus familiaris domestic dog BeadChip SNP array |
description |
Several hundred disease-causing mutations are currently known in domestic dogs. Breeding management is therefore required to minimize their spread. Recently, genetic methods such as direct-to-consumer testing have gained popularity; however, their effects on dog populations are unclear. Here, we aimed to evaluate the influence of genetic testing on the frequency of mutations responsible for canine degenerative myelopathy (DM) and assess the changes in the genetic structure of a Pembroke Welsh corgi population from Japan. To evaluate the influence of genetic testing on the frequency of mutations causing canine degenerative myelopathy and changes to genetic structure in the Pembroke Welsh corgi population from Japan, 117 dogs were genotyped. Weir and Cockerham population differentiation (FST) based on genome-wide single-nucleotide polymorphism (SNP) detected the SNP with the highest FST located in the intron of SOD1 adjacent to the c.118G>A mutation, supporting a selection signature on SOD1. Further ... : 142,510 single nucleotide polymorphism (SNP) of 112 dogs by using Illumina's Canine 230K Consortium chip. ... |
format |
Dataset |
author |
Matsumoto, Yuki |
author_facet |
Matsumoto, Yuki |
author_sort |
Matsumoto, Yuki |
title |
CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... |
title_short |
CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... |
title_full |
CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... |
title_fullStr |
CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... |
title_full_unstemmed |
CanineHD 230 K BeadChip data from Pembroke Welsh corgi ... |
title_sort |
caninehd 230 k beadchip data from pembroke welsh corgi ... |
publisher |
Dryad |
publishDate |
2023 |
url |
https://dx.doi.org/10.5061/dryad.rbnzs7hhk https://datadryad.org/stash/dataset/doi:10.5061/dryad.rbnzs7hhk |
long_lat |
ENVELOPE(177.167,177.167,-84.983,-84.983) |
geographic |
Weir |
geographic_facet |
Weir |
genre |
Canis lupus |
genre_facet |
Canis lupus |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.rbnzs7hhk |
_version_ |
1789964345398001664 |