Scaffolds
The Scaffolds.zip file is a compressed zip file containing a directory with the scaffolds corresponding to the microsatellite loci. The Scaffolds directory contains the sequence of the scaffolds that had microsatellites identified on them. The files are bz2 compressed zip files. The unzipped file is...
| Main Authors: | , , , , , , , , , , , |
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| Format: | Dataset |
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Dryad Digital Repository
2016
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| Online Access: | https://dx.doi.org/10.5061/dryad.rb7h0/3 http://datadryad.org/resource/doi:10.5061/dryad.rb7h0/3 |
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ftdatacite:10.5061/dryad.rb7h0/3 |
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openpolar |
| institution |
Open Polar |
| collection |
DataCite Metadata Store (German National Library of Science and Technology) |
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ftdatacite |
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unknown |
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1KP microsatellite development neutral markers non-neutral markers NGS SSR transcriptomes Abies lasiocarpa Acacia argyrophylla Acacia pycnantha Acer negundo Acmopyle pancheri Acrosiphonia sp Actinidia chinensis Adiantum tenerum Aerva lanata Aerva persica Aesculus pavia Aextoxicon punctatum Agapanthus africanus Agastache rugosa Agathis robusta Agave tequilana Ailanthus altissima Ajuga reptans Akebia trifoliata Alangium chinense Allamanda cathartica Allionia incarnata Allionia spp Allium commutatum Allium sativum Alnus serrulata Aloe vera Alternanthera brasileana Alternanthera caracasana Alternanthera sessilis Alternanthera tenella Amaranthus cruentus Amaranthus retroflexus Amaryllis belladonna Amborella trichopoda Amelanchier canadensis Amentotaxus argotaenia Ancistrocladus tectorius Anemia tomentosa Anemone hupenhensis Anemone pulsatilla Angelica archangelica Angiopteris evecta Anisacanthus quadrifidas Ankistrodesmus sp Annona muricata Anomodon attenuatus Anthemis tinctoria Anthirrhinum majus Anthoceros agrestis Anticharis glandulosa Aphanochaete repens Aphanopetalum resinosum Apios americana Apocynum androsaemifolium Arabis alpina Araucaria rulei Ardisia humilis Ardisia revoluta Argemone mexicana Aristida stricta Aristolochia elegans Arucaria sp Aruncus dioicus Ascarina rubricaulis Asclepia curassavica Asparagus densiflorus Asplenium nidus Asplenium platyneuron Aster tataricus Asteromonas gracilis Astilbe chinensis Astragalus membranaceus Astragalus propinquus Athrotaxis cupressoides Athyrium filix femina Atriplex hortensis Atriplex prostrata Atriplex rosea Atropa belladonna Aucuba japonica Austrobaileya scandens Austrocedrus chilensis Austrotaxus spicata Avena fatua Azadirachta indica Azolla cf. caroliniana Bacopa caroliniana Balanophora fungosa Bambusina borreri Barbilophozia barbata Basella alba Bathycoccus prasinos Batis maritima Bauhinia tomentosa Begonia sp Berberidopsis beckleri Bergenia sp Beta maritima Betaphycus gelatinae Betula pendula Bischofia javanica Bituminaria bituminosa Bixa orellana Blasia sp Blastophysa cf. rhizopus Blechnum spicant Blutoparon vermiculare Boehmeria nivea Boerhavia cf. spiderwort Boerhavia dominnii Bolbocoleon piliferum Borya sphaerocephala Boswellia sacra Botryococcus braunii Botryococcus sudeticus Botryococcus terribilis Botrypus virginianus Bougainvillea spectabilis Boykinia jamesii Brachiomonas submarina Brassica nigra Brocchinia reducta Brodiaea sierrae Brugmansia sanguinea Bryopsis plumosa Bryum argenteum Buddleja sp Bursera simaruba Buxbaumia aphylla Buxus sempervirens Byblis gigantea Caiophora chuquitensis Calceolaria pinifolia Calliergon cordifolium Callitris gracilis Callitris macleayana Calocedrus decurrens Calycanthus floridus Calypogeia fissa Campanula delicatula Campanula erinus Camptotheca acuminata Canella winterana Canna sp Cannabis sativa Capnoides sempervirens Carteria crucifera Carteria obtusa Carthamus lanatus Carya glabra Cassytha filiformis Castanea crenata Castanea pumila Cathaya agryrophylla Cavendishia cuatrecasasii Cedrus libani Celsia arcturus Celtis occidentalis Centella asiatica Cephaleuros virescens Cephalotaxus harringtonia Cephalotus follicularis Ceramium kondoi Ceratocapnos vesicaria Ceratodon purpureus Ceratopteris thalictroides Cercidiphyllum japonicum Cercis canadensis Cercocarpus ledifolius Chaetopeltis orbicularis Chaetosphaeridium globosum Chamaecyparis lawsoniana Chamaseyce mesebyranthemum Chara vulgaris Cheilanthes arizonica Chelidonium majus Chenopodium quinoa Chionanthus retusus Chlamydomonas bilatus Chlamydomonas cribrum Chlamydomonas moewusii Chlamydomonas noctigama Chlamydomonas sp Chlorella minutissima Chlorogalum pomeridianum Chlorokybus atmophyticus Chloromonas oogama Chloromonas perforata Chloromonas reticulata Chloromonas rosa Chloromonas subdivisa Chloromonas tughillensi Chlorosarcinopsis halophila Chondropetalum tectorum Chondrus crispus Chroodactylon ornatu Chroomonas sp Chrysobalanus icaco Cibotium glaucum Cicerbita plumieri Cinnamomum camphora Cistus inflatus Citrus x paradisi Cladophora glomerata Cladrastis lutea Cleome gynandra Cleome violaceae Cleome viscosa Climacium dendroides Closterium lunula Coccomyxa pringsheimii Cochlearea officinalis Cocos nucifera Codariocalyx motorius Codium fragile Colchicum autumnale Coleochaete irregularis Coleochaete scutata Colpomenia sinuosa Conocephalum conicum Conopholis americana Convolvulus arvensis Conzya canadensis Copaifera officianalis Coriaria nepalensis Cornus floridana Corokia cotoneaster Corydalis linstowiana Cosmarium broomei Cosmarium granatum Cosmarium ochthodes Cosmarium subtumidum Cosmarium tinctum Cosmocladium cf. constrictum Cotoneaster transcaucasicus Crassula perforata Crepidomanes venosum Crossopetalum rhacoma Croton tiglium Cryptomeria japonica Cryptomonas curvata Culcita macrocarpa Cunninghamia lanceolata Cunonia capensis Cupressus dupreziana Curculigo sp Curcuma olena Curtisia dentata Cuscuta pentagonia Cyanastrum cordifolium Cyanella orchidofromis Cyanophora paradoxa Cyanoptyche gloeocystis Cyathea spinulosa Cycas micholitzii Cylindrocapsa geminella Cylindrocystis brebissonii Cylindrocystis cushleckae Cylindrocystis sp Cymbomonas sp Cymbopogon nardus Cyperus papyrus Cypselea humifusum Cyrilla racemiflora Cystopteris fragilis Cystopteris reevesiana Cystopteris utahensis Dacrycarpus compactus Dacrydium balansae Daenikera sp Danaea nodosa Danaea sp Daphne geraldii Daphniphyllum macropodum Datura metel Davallia fejeensis Delosperma echinatum Dendropemon caribaeus Dennstaedtia Deparia lobato Deschampsia cespitosa Desmanthus illinoensis Desmarestia viridis Desmidium aptogonum Deutzia scabra Dianthus sp Dichroa febrifuga Dicranum scoparium Dictyopteris undulata Didymochlaena truncatula Digitalis purpurea Dillenia indica Dioon edule Dioscorea villosa Diospyros malabarica Diphyscium foliosum Diplazium wichurae Dipsacus sativum Dipteris conjugata Diselma archeri Disporopsis pernyi Dolichomastix tenuilepi Dombeya burgessiae Draba aizoides Draba hispida Draba magellanica Draba oligosperma Draba ossetica Draba sachalinensis Drakea elastica Drimia altissima Drimys winteri Dryas octopetala Drypetes deplanchei Dumontia simplex Dunaliella primolecta Dunaliella salina Dunaliella tertiolecta Edgeworthia papyrifera Ehretia acuminata Elaeagnus pungens Elaeocarpus sylvestris Eleusine coracana Encalypta streptocarpa Encephalartos barteri Entocladia endozoica Entransia fimbriat Ephedra sinica Epifagus virginiana Epilobium sp Equisetum diffusum Equisetum hymale Eremosphaera viridi Erigeron speciosus Eriospermum lancifolia Erythroxylum coca Escallonia rubra Escallonia sp. cv. Newport Eschscholzia californica Euastrum affine Eucalyptus leucoxylon Eucheuma denticulatum Eucommia ulmoides Eudorina elegans Euglena sp Euphorbia pekinensis Eupomatia bennettii Euptelea pleiosperma Exacum affine Exocarpos cupressiformis Fagus sylvatica Falcatifolium taxoides Ficus religiosa Flaveria angustifolia Flaveria bidentis Flaveria brownii Flaveria cronquestii Flaveria kochiana Flaveria palmeri Flaveria pringlei Flaveria pubescens Flaveria sonorensis Flaveria trinervia Flaveria vaginata Fokienia hodginsii Fontinalis antipyretica Forestiera segregata Fouqueria macdougalli Francoa appendiculata Frankenia laevis Freycinetia multiflora Fritschiella tuberosa Frullania Galax urceolata Galphimia gracilis Garcinia livingstonei Garcinia oblongiflolia Gelsemium sempervirens Geminella sp Gentiana acaulis Geranium carolinianum Geum quellyon Ginkgo biloba Glaucocystis cf. nostochinearum Glaucosphaera vacuolata Gleditsia sinensis Gleditsia triacanthos Gloeochaete wittrockiana Gloeopeltis furcata Gloriosa superba Glycine soja Glycyrrhiza glabra Glycyrrhiza lepidota Glyptostrobus pensilis Gnetum montanum Golenkinia longispicula Gomortega keule Gompholobium polymorphum Gonatozygon kinahanii Gonium pectorale Goodyera pubescens Gracilaria asiatica Gracilaria blodgettii Gracilaria chouae Gracilaria lemaneiformi Grateloupia filicina Grateloupia livida Grateloupia turuturu Grevillea robusta Griselinia littoralis Griselinia racemosa Gunnera manicata Gymnocarpium dryopteris Gymnocladus dioicus Gymnogongrus ftabelliformis Gyrocarpus americanus Gyrostemon ramulosus Haemaria discolor Haematococcus pluviali Haematococcus pluvialis Hafniomonas reticulata Hakea drupaceae Hakea prostrata Halocarpus bidwillii Halochlorococcum marinum Hamamelis virginiana Hedera helix Helenium autumnale Helicodictyon planctonicum Heliconia sp Heliotropium calcicola Heliotropium convolvulaceum Heliotropium filiforme Heliotropium greggii Heliotropium karwinsky Heliotropium mendocinum Heliotropium racemosum Heliotropium sp Heliotropium tenellum Heliotropium texanum Helonias bullata Helwingia japonica Hemerocallis sp Hemerocallis spp Hemiselmis virescens Heracleum lanatum Hesperaloe parviflora Heterochlamydomonas inaequalis Heteropyxis natalensis Heterosiphonia pulchra Heuchera sanguinea Hibiscus cannabinus Hilleria latifolia Hizikia fusifrome Holarrhena pubescens Homalosorus pycnocarpos Hormidiella sp Houttuynia cordata Humulus lupulus Huperzia lucidula Huperzia myrisinites Huperzia selago Huperzia squarrosa Hydrangea quercifolia Hydrastis canadensis Hydrocotyle umbellata Hymenophyllum bivalve Hymenophyllum cupressiforme Hypecoum procumbens Hypericum perforatum Hypnum subimponens Idiospermum australiense Ignatius tetrasporus Ilex paraguariensis Ilex sp Ilex vomitoria Illicium floridanum Illicium parviflorum Impatiens balsamifera Interfilum paradoxum Inula helenium Ipomoea coccinea Ipomoea hederacea Ipomoea indica Ipomoea lindheimeri Ipomoea lobata Ipomoea nil Ipomoea pubescens Ipomoea purpurea Ipomoea quamoclit Ishige okamurai Isochrysis sp Isoetes sp Isoetes tegetiformans Itea virginica Jacquinia sp Johnsonia pubescens Juglans nigra Juncus inflexus Juniperus scopulorum Kadsura heteroclite Kalanchoe crenato diagremontiana Kaliphora madagascariensis Kappaphycus alvarezii Kerria japonica Keteleeria evelyniana Kigelia africana Kjellmaniella crassifolia Klebsormidium subtile Kochia scoparia Koeberlina spinosa Krameria lanceolata Lactuca graminifolia Lagarostrobos franklinii Lagerstroemia indica Laminaria japonica Lantana camara Larix speciosa Larrea tridentata Lathyrus sativus Laurelia sempervirens Lavandula angustifolia Ledum palustre Leiosporoceros dussii Lennoa madreporoides Leontopodium alpinum Leonurus japonicus Lepidosperma gibsonii Leptosira obovata Leucobryum glaucum Licania michauxii Ligustrum sinense Lilium sargentiae Limnanthes douglassii Limonium spectabile Lindenbergia philippensis Lindera benzoin Lindsaea linearis Linum bienne Linum flavum Linum grandiflorum Linum hirsutum Linum leonii Linum lewisii Linum macraei Linum perenne Linum strictum Linum tenuifolium Linum usitatissimum Liquidambar styraciflua Litchi chinensis Lobelia siphilitica Lobochlamys segnis Lobomonas rostrata Lomandra longifolia Lonicera japonica Lophophora williamsii Loropetalum chinense Ludovia sp Lunularia cruciata Lupinus angustifolius Lupinus polyphyllus Lycium barbarum Lycium sp Lycopersicon cheesmanii Lycopodiella apressa Lycopodium annotinum Lycopodium deuterodensum Lygodium japonicum Maesa lanceolata Magnolia grandiflora Maianthemum canadense Maianthemum sp Mallomonas sp Malus baccata Manihot grahamii Manilkara zapota Manoao colensoi Mansoa alliacea Mantoniella squamata Mapania palustris Maranta leuconeura Marattia attenuata Marchantia emarginata Marchantia paleacea Marchantia polymorpha Marrubium vulgare Masdevallia yuangensis Matricaria matricariodes Mazzaella japonica Medinilla magnifica Megaceros tosanus Megaceros vincentianus Melaleuca quinquenervia Melia azedarach Meliosma cuneifolia Melissa officinalis Menyanthes trifoliata Mertensia paniculata Mesostigma viride Mesotaenium braunii Mesotaenium caldariorum Mesotaenium endlicherianum Mesotaenium kramstei Metasequoia glyptostroboides Metzgeria crassipilis Michelia maudiae Micrasterias fimbriata Microbiota decussata Microcachrys tetragona Microspora cf. tumidula Microstegium vimineum Microstrobos fitzgeraldii Microtea debilis Microthamnion kuetzigianum Mirabilis jalapa Mitella pentandra Mollugo cerviana Mollugo nudicaulis Mollugo pentaphylla Mollugo verticillata Monoclea gottschei Monomastix opisthostigma Monotropa uniflora Moringa oleifera Morus nigra Mougeotia sp Mumea americana Muntingia calabura Mydocarpus sp Myrica cerifera Myriophyllum aquaticum Myriopteris eatonii Myristica fragrans Nageia nagi Nandina domestica Nannochloris atomus Nannochloropsis oculata Narcissus viridiflorus Neckera douglasii Nelumbo sp Neocallitropsis pancheri Neochloris oleoabundans Neochloris sp Neochlorosarcina sp Nepenthes alata Nepeta cataria Nephrolepis exaltata Nephroselmis olivace Nephroselmis pyriformis Netrium digitus Neurachne alopecuroidea Neurachne annularis Neurachne lanigera Neurachne minor Neurachne munroi Neurachne tenuifolia Nicotiana sylvestris Niphotrichum elongatum Nolina atopocarpa Nolina bigelorii Nothoceros aenigmaticus Nothofagus obliqua Nothotsuga longibracteata Nucleotaenium eifelense Nuphar advena Nymphaea spp Nypa fruticans Nyssa ogeche Ochlochaete sp Ochna mossambicensis Ochna serrulata Ochromonas sp Odontosororia sp Oedogonium cardiacu Oedogonium foveolatum Oenothera affinis Oenothera berlandieri Oenothera biennis Oenothera clelandii Oenothera elata Oenothera elata hookeri Oenothera filiformis Oenothera gaura Oenothera grandiflora Oenothera grandis Oenothera laciniata Oenothera longituba Oenothera nana Oenothera picensis Oenothera rosea Oenothera serrulata Oenothera speciosa Oenothera suffulta suffulta Oenothera villaricae Olea europaea Oltmannsiellopsis viridis Oncidium sphacelatum Oncotheca balansae Onoclea sensibilis Onychonema laeve Oogamochlamys gigantea Ophioglossum vulgatum Opuntia sp Orchidantha maxillaroides Oresitrophe rupifraga Orobanche fasciculata Orthotrichum lyellii Osmunda sp Osmundastrum cinnamomeum Oxalis sp Oxera neriifolia Oxera pulchella Paeonia lactiflora Pandorina morum Panicum miliaceum A Papaver bracteatum Papaver rhoeas Papaver setigerum Papaver somniferum Papuacedrus papuana Parachlorella kessleri Paraneurachne muelleri Paraphymatoceros hallii Parasitaxus usta Passiflora caerulea Passiflora edulis Passiflora sp Paulownia fargesii Pavlova lutheri Pediastrum duplex Pedinomonas minor Pedinomonas tuberculata Peganum harmala Peliosanthese minor Pellia cf. Epiphylla Pellia neesiana Peltoboykinia watanabei Penium exiguum Pennantia corymbosa Peperomia fraseri Pereskia aculeata Persea borbonia Persursaria percursa Petalonia fascia Petiveria alliacea Peumus boldus Phacotus lenticularis Phaeomegaceros coriaceus Phelline lucida Phellodendron amurense Philadelphus inodorus Philonotis fontana Phlox drummondii Phlox sp Pholisma arenarium Phoradendron serotinum Phormium tenax Phycella aff. cyrtanthoides Phyla dulcis Phyllanthus sp Phyllocladus hypohyllus Phymatodocis nordstedtiana Physena madagascariensis Physocarpus opulifolius Phytolacca americana Phytolacca bogotensis Picea engelmanii Picocystis salinarum Pilgerodendron uviferum Pilularia globulifera Pinguicula agnata Pinguicula caudata Pinus jeffreyi Pinus parviflora Pinus ponderosa Pinus radiata Piper auritum Pirula salina Pistia stratioides Pittosporum resiniferum Pittosporum sahnianum Pityrogramma trifoliata Plagiomnium insigne Planophila laetevirens Planophila terrestris Planotaenium ohtanii Plantago coronopis Plantago virginica Platanthera clavellata Platanus occidentalis Platycladus orientalis Platycodon grandiflorus Platyspermation crassifolium Pleopeltis polypodioides Pleurastrum insigne Pleurotaenium trabecul Plumbago auriculata Podocarpus coriaceus Podocarpus rubens Podophyllum peltatum Pogostemon sp Polansia trachysperma Polycarpaea repens Polygala lutea Polygonum convolvulus Polypodium glycyrrhiza Polypodium hesperium Polypremum procumbens Polyscias fruticosa Polysiphonia japonica Polystichum acrostichoides Polytrichum commune Porella navicularis Porella pinnata Porphyra yezoensis Porphyridium cruentum Porphyridium purpureum Portulaca amilis Portulaca cryptopetala Portulaca grandiflora Portulaca mauii Portulaca molokaiensis Portulaca oleracea Portulaca pilosa Portulaca suffruticosa Portulaca umbraticola Posidonia australis Prasinococcus capsulatus Prasinoderma coloniale Prasiola crispa Prionitis divaricata Prorocentrum micans Proteomonas sulcata Prototheca wickerhamii Prumnopitys andina Prunella vulgaris Prunus prostrata Prymnesium parvum Pseudolarix amabilis Pseudolycopodiella caroliniana Pseudoscourfieldia marina Pseudotaxiphyllum elegans Pseudotaxus chienii Pseudotsuga menziesii Psilotum nudum Psychotria douarrei Psychotria ipecacuanha Psychotria marginata Pteris ensigormis Pteris vittata Pteromonas angulosa Pteromonas sp Ptilidium pulcherrimum Punctaria latifolia Punica granatum Pycnanthemum tenuifolium Pycnococcus provasolii Pyramimonas parkeae Pyrenacantha malvifolia Quassia amara Quercus shumardii Quillaja saponaria Racomitrium varium Radula lindenbergia Rauvolfia tetraphyla Rehmannia glutinosa Reseda odorata Retrophyllum minus Rhamnus caroliniana Rhamnus japonica Rhizophora mangle Rhodella violacea Rhodiola rosea Rhodochaete parvula Rhododendron scopulorum Rhodomonas sp Rhodophiala pratensis Rhynchostegium serrulatum Ribes aff. giraldii Ricinus communis Roridula gorgonias Rosa palustris Rosmarinus officinalis Roya obtusa Ruellia brittoniana Ruscus sp Sabal bermudana Sagittaria latifolia Saintpaulia ionantha Salix acutifolia Salix dasyclados Salix eriocephala Salix fargesii Salix purpurea Salix sachalinensis Salix viminalis Salvadora sp Salvia spp Sambucus canadensis Sanchezia sp Sanguinaria canadensis Sanguisorba minor Sansevieria trifasciata Santalum acuminatum Saponaria officianalis Sarcandra glabra Sarcobatus vermiculatus Sarcodes sanguinea Sargassum hemiphyllum Sargassum henslowianum Sargassum horneri Sargassum integerrimum Sargassum muticum Sargassum thunbergii Sargassum vachellianum Saruma henryi Sassafras albidum Saururus cernuus Saxegothaea conspicua Saxifraga stolonifera Scaevola sp Scapania nemorosa Scenedesmus dimorphus Sceptridium dissectum Scherffelia dubia Schiedea membranacea Schistochila sp Schizolaena sp Schlegelia parasitica Schlegelia parasitica B Schlegelia violacea Schwetschkeopsis fabronia Sciadopitys verticillata Scouleria aquatica Scourfieldia sp Scutellaria montana Scytosihon lomentaria Scytosiphon dotyo Selaginella apoda Selaginella lepidophylla Selaginella selaginoides Selaginella wallacei Selaginella willdenowii Senecio rowleyanus Senna hebecarpa Sequoia sempervirens Sequoiadendron giganteum Serenoa repens Sessuvium portulacastrum Sessuvium ventricosum Sideroxylon reclinatum Silene latifolia Silybum marianum Simmondsia chinensis Sinapis alba Sinningia tuberosa Sinojackia xylocarpa Sinotubimorpha guangdongensis Sisyrinchium angustifolium Smilax bona nox Solanum dulcamara Solanum lasiophyllum Solanum ptychanthum Solanum sisymbriifolium Solanum xanthocarpum Solenostemon scutellarioides Solidago canadensis Sorbus koehneana Souroubea exauriculata Spergularia media Spermatozopsis exsultans Spermatozopsis similis Sphaerocarpos texanus Sphagnum lescurii Sphagnum palustre Sphagnum recurvatum Spirogyra sp Spirotaenia minuta Spirotaenia sp Stachyurus praecox Stackhousia spathulata Stangeria eriopus Staphylea trifolia Staurastrum sebaldi Staurodesmus convergens Staurodesmus omearii Stemona tuberosa Stephanosphaera pluvialis Stichococcus bacillaris Stigeoclonium helveticum Strelitzia reginae |
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1KP microsatellite development neutral markers non-neutral markers NGS SSR transcriptomes Abies lasiocarpa Acacia argyrophylla Acacia pycnantha Acer negundo Acmopyle pancheri Acrosiphonia sp Actinidia chinensis Adiantum tenerum Aerva lanata Aerva persica Aesculus pavia Aextoxicon punctatum Agapanthus africanus Agastache rugosa Agathis robusta Agave tequilana Ailanthus altissima Ajuga reptans Akebia trifoliata Alangium chinense Allamanda cathartica Allionia incarnata Allionia spp Allium commutatum Allium sativum Alnus serrulata Aloe vera Alternanthera brasileana Alternanthera caracasana Alternanthera sessilis Alternanthera tenella Amaranthus cruentus Amaranthus retroflexus Amaryllis belladonna Amborella trichopoda Amelanchier canadensis Amentotaxus argotaenia Ancistrocladus tectorius Anemia tomentosa Anemone hupenhensis Anemone pulsatilla Angelica archangelica Angiopteris evecta Anisacanthus quadrifidas Ankistrodesmus sp Annona muricata Anomodon attenuatus Anthemis tinctoria Anthirrhinum majus Anthoceros agrestis Anticharis glandulosa Aphanochaete repens Aphanopetalum resinosum Apios americana Apocynum androsaemifolium Arabis alpina Araucaria rulei Ardisia humilis Ardisia revoluta Argemone mexicana Aristida stricta Aristolochia elegans Arucaria sp Aruncus dioicus Ascarina rubricaulis Asclepia curassavica Asparagus densiflorus Asplenium nidus Asplenium platyneuron Aster tataricus Asteromonas gracilis Astilbe chinensis Astragalus membranaceus Astragalus propinquus Athrotaxis cupressoides Athyrium filix femina Atriplex hortensis Atriplex prostrata Atriplex rosea Atropa belladonna Aucuba japonica Austrobaileya scandens Austrocedrus chilensis Austrotaxus spicata Avena fatua Azadirachta indica Azolla cf. caroliniana Bacopa caroliniana Balanophora fungosa Bambusina borreri Barbilophozia barbata Basella alba Bathycoccus prasinos Batis maritima Bauhinia tomentosa Begonia sp Berberidopsis beckleri Bergenia sp Beta maritima Betaphycus gelatinae Betula pendula Bischofia javanica Bituminaria bituminosa Bixa orellana Blasia sp Blastophysa cf. rhizopus Blechnum spicant Blutoparon vermiculare Boehmeria nivea Boerhavia cf. spiderwort Boerhavia dominnii Bolbocoleon piliferum Borya sphaerocephala Boswellia sacra Botryococcus braunii Botryococcus sudeticus Botryococcus terribilis Botrypus virginianus Bougainvillea spectabilis Boykinia jamesii Brachiomonas submarina Brassica nigra Brocchinia reducta Brodiaea sierrae Brugmansia sanguinea Bryopsis plumosa Bryum argenteum Buddleja sp Bursera simaruba Buxbaumia aphylla Buxus sempervirens Byblis gigantea Caiophora chuquitensis Calceolaria pinifolia Calliergon cordifolium Callitris gracilis Callitris macleayana Calocedrus decurrens Calycanthus floridus Calypogeia fissa Campanula delicatula Campanula erinus Camptotheca acuminata Canella winterana Canna sp Cannabis sativa Capnoides sempervirens Carteria crucifera Carteria obtusa Carthamus lanatus Carya glabra Cassytha filiformis Castanea crenata Castanea pumila Cathaya agryrophylla Cavendishia cuatrecasasii Cedrus libani Celsia arcturus Celtis occidentalis Centella asiatica Cephaleuros virescens Cephalotaxus harringtonia Cephalotus follicularis Ceramium kondoi Ceratocapnos vesicaria Ceratodon purpureus Ceratopteris thalictroides Cercidiphyllum japonicum Cercis canadensis Cercocarpus ledifolius Chaetopeltis orbicularis Chaetosphaeridium globosum Chamaecyparis lawsoniana Chamaseyce mesebyranthemum Chara vulgaris Cheilanthes arizonica Chelidonium majus Chenopodium quinoa Chionanthus retusus Chlamydomonas bilatus Chlamydomonas cribrum Chlamydomonas moewusii Chlamydomonas noctigama Chlamydomonas sp Chlorella minutissima Chlorogalum pomeridianum Chlorokybus atmophyticus Chloromonas oogama Chloromonas perforata Chloromonas reticulata Chloromonas rosa Chloromonas subdivisa Chloromonas tughillensi Chlorosarcinopsis halophila Chondropetalum tectorum Chondrus crispus Chroodactylon ornatu Chroomonas sp Chrysobalanus icaco Cibotium glaucum Cicerbita plumieri Cinnamomum camphora Cistus inflatus Citrus x paradisi Cladophora glomerata Cladrastis lutea Cleome gynandra Cleome violaceae Cleome viscosa Climacium dendroides Closterium lunula Coccomyxa pringsheimii Cochlearea officinalis Cocos nucifera Codariocalyx motorius Codium fragile Colchicum autumnale Coleochaete irregularis Coleochaete scutata Colpomenia sinuosa Conocephalum conicum Conopholis americana Convolvulus arvensis Conzya canadensis Copaifera officianalis Coriaria nepalensis Cornus floridana Corokia cotoneaster Corydalis linstowiana Cosmarium broomei Cosmarium granatum Cosmarium ochthodes Cosmarium subtumidum Cosmarium tinctum Cosmocladium cf. constrictum Cotoneaster transcaucasicus Crassula perforata Crepidomanes venosum Crossopetalum rhacoma Croton tiglium Cryptomeria japonica Cryptomonas curvata Culcita macrocarpa Cunninghamia lanceolata Cunonia capensis Cupressus dupreziana Curculigo sp Curcuma olena Curtisia dentata Cuscuta pentagonia Cyanastrum cordifolium Cyanella orchidofromis Cyanophora paradoxa Cyanoptyche gloeocystis Cyathea spinulosa Cycas micholitzii Cylindrocapsa geminella Cylindrocystis brebissonii Cylindrocystis cushleckae Cylindrocystis sp Cymbomonas sp Cymbopogon nardus Cyperus papyrus Cypselea humifusum Cyrilla racemiflora Cystopteris fragilis Cystopteris reevesiana Cystopteris utahensis Dacrycarpus compactus Dacrydium balansae Daenikera sp Danaea nodosa Danaea sp Daphne geraldii Daphniphyllum macropodum Datura metel Davallia fejeensis Delosperma echinatum Dendropemon caribaeus Dennstaedtia Deparia lobato Deschampsia cespitosa Desmanthus illinoensis Desmarestia viridis Desmidium aptogonum Deutzia scabra Dianthus sp Dichroa febrifuga Dicranum scoparium Dictyopteris undulata Didymochlaena truncatula Digitalis purpurea Dillenia indica Dioon edule Dioscorea villosa Diospyros malabarica Diphyscium foliosum Diplazium wichurae Dipsacus sativum Dipteris conjugata Diselma archeri Disporopsis pernyi Dolichomastix tenuilepi Dombeya burgessiae Draba aizoides Draba hispida Draba magellanica Draba oligosperma Draba ossetica Draba sachalinensis Drakea elastica Drimia altissima Drimys winteri Dryas octopetala Drypetes deplanchei Dumontia simplex Dunaliella primolecta Dunaliella salina Dunaliella tertiolecta Edgeworthia papyrifera Ehretia acuminata Elaeagnus pungens Elaeocarpus sylvestris Eleusine coracana Encalypta streptocarpa Encephalartos barteri Entocladia endozoica Entransia fimbriat Ephedra sinica Epifagus virginiana Epilobium sp Equisetum diffusum Equisetum hymale Eremosphaera viridi Erigeron speciosus Eriospermum lancifolia Erythroxylum coca Escallonia rubra Escallonia sp. cv. Newport Eschscholzia californica Euastrum affine Eucalyptus leucoxylon Eucheuma denticulatum Eucommia ulmoides Eudorina elegans Euglena sp Euphorbia pekinensis Eupomatia bennettii Euptelea pleiosperma Exacum affine Exocarpos cupressiformis Fagus sylvatica Falcatifolium taxoides Ficus religiosa Flaveria angustifolia Flaveria bidentis Flaveria brownii Flaveria cronquestii Flaveria kochiana Flaveria palmeri Flaveria pringlei Flaveria pubescens Flaveria sonorensis Flaveria trinervia Flaveria vaginata Fokienia hodginsii Fontinalis antipyretica Forestiera segregata Fouqueria macdougalli Francoa appendiculata Frankenia laevis Freycinetia multiflora Fritschiella tuberosa Frullania Galax urceolata Galphimia gracilis Garcinia livingstonei Garcinia oblongiflolia Gelsemium sempervirens Geminella sp Gentiana acaulis Geranium carolinianum Geum quellyon Ginkgo biloba Glaucocystis cf. nostochinearum Glaucosphaera vacuolata Gleditsia sinensis Gleditsia triacanthos Gloeochaete wittrockiana Gloeopeltis furcata Gloriosa superba Glycine soja Glycyrrhiza glabra Glycyrrhiza lepidota Glyptostrobus pensilis Gnetum montanum Golenkinia longispicula Gomortega keule Gompholobium polymorphum Gonatozygon kinahanii Gonium pectorale Goodyera pubescens Gracilaria asiatica Gracilaria blodgettii Gracilaria chouae Gracilaria lemaneiformi Grateloupia filicina Grateloupia livida Grateloupia turuturu Grevillea robusta Griselinia littoralis Griselinia racemosa Gunnera manicata Gymnocarpium dryopteris Gymnocladus dioicus Gymnogongrus ftabelliformis Gyrocarpus americanus Gyrostemon ramulosus Haemaria discolor Haematococcus pluviali Haematococcus pluvialis Hafniomonas reticulata Hakea drupaceae Hakea prostrata Halocarpus bidwillii Halochlorococcum marinum Hamamelis virginiana Hedera helix Helenium autumnale Helicodictyon planctonicum Heliconia sp Heliotropium calcicola Heliotropium convolvulaceum Heliotropium filiforme Heliotropium greggii Heliotropium karwinsky Heliotropium mendocinum Heliotropium racemosum Heliotropium sp Heliotropium tenellum Heliotropium texanum Helonias bullata Helwingia japonica Hemerocallis sp Hemerocallis spp Hemiselmis virescens Heracleum lanatum Hesperaloe parviflora Heterochlamydomonas inaequalis Heteropyxis natalensis Heterosiphonia pulchra Heuchera sanguinea Hibiscus cannabinus Hilleria latifolia Hizikia fusifrome Holarrhena pubescens Homalosorus pycnocarpos Hormidiella sp Houttuynia cordata Humulus lupulus Huperzia lucidula Huperzia myrisinites Huperzia selago Huperzia squarrosa Hydrangea quercifolia Hydrastis canadensis Hydrocotyle umbellata Hymenophyllum bivalve Hymenophyllum cupressiforme Hypecoum procumbens Hypericum perforatum Hypnum subimponens Idiospermum australiense Ignatius tetrasporus Ilex paraguariensis Ilex sp Ilex vomitoria Illicium floridanum Illicium parviflorum Impatiens balsamifera Interfilum paradoxum Inula helenium Ipomoea coccinea Ipomoea hederacea Ipomoea indica Ipomoea lindheimeri Ipomoea lobata Ipomoea nil Ipomoea pubescens Ipomoea purpurea Ipomoea quamoclit Ishige okamurai Isochrysis sp Isoetes sp Isoetes tegetiformans Itea virginica Jacquinia sp Johnsonia pubescens Juglans nigra Juncus inflexus Juniperus scopulorum Kadsura heteroclite Kalanchoe crenato diagremontiana Kaliphora madagascariensis Kappaphycus alvarezii Kerria japonica Keteleeria evelyniana Kigelia africana Kjellmaniella crassifolia Klebsormidium subtile Kochia scoparia Koeberlina spinosa Krameria lanceolata Lactuca graminifolia Lagarostrobos franklinii Lagerstroemia indica Laminaria japonica Lantana camara Larix speciosa Larrea tridentata Lathyrus sativus Laurelia sempervirens Lavandula angustifolia Ledum palustre Leiosporoceros dussii Lennoa madreporoides Leontopodium alpinum Leonurus japonicus Lepidosperma gibsonii Leptosira obovata Leucobryum glaucum Licania michauxii Ligustrum sinense Lilium sargentiae Limnanthes douglassii Limonium spectabile Lindenbergia philippensis Lindera benzoin Lindsaea linearis Linum bienne Linum flavum Linum grandiflorum Linum hirsutum Linum leonii Linum lewisii Linum macraei Linum perenne Linum strictum Linum tenuifolium Linum usitatissimum Liquidambar styraciflua Litchi chinensis Lobelia siphilitica Lobochlamys segnis Lobomonas rostrata Lomandra longifolia Lonicera japonica Lophophora williamsii Loropetalum chinense Ludovia sp Lunularia cruciata Lupinus angustifolius Lupinus polyphyllus Lycium barbarum Lycium sp Lycopersicon cheesmanii Lycopodiella apressa Lycopodium annotinum Lycopodium deuterodensum Lygodium japonicum Maesa lanceolata Magnolia grandiflora Maianthemum canadense Maianthemum sp Mallomonas sp Malus baccata Manihot grahamii Manilkara zapota Manoao colensoi Mansoa alliacea Mantoniella squamata Mapania palustris Maranta leuconeura Marattia attenuata Marchantia emarginata Marchantia paleacea Marchantia polymorpha Marrubium vulgare Masdevallia yuangensis Matricaria matricariodes Mazzaella japonica Medinilla magnifica Megaceros tosanus Megaceros vincentianus Melaleuca quinquenervia Melia azedarach Meliosma cuneifolia Melissa officinalis Menyanthes trifoliata Mertensia paniculata Mesostigma viride Mesotaenium braunii Mesotaenium caldariorum Mesotaenium endlicherianum Mesotaenium kramstei Metasequoia glyptostroboides Metzgeria crassipilis Michelia maudiae Micrasterias fimbriata Microbiota decussata Microcachrys tetragona Microspora cf. tumidula Microstegium vimineum Microstrobos fitzgeraldii Microtea debilis Microthamnion kuetzigianum Mirabilis jalapa Mitella pentandra Mollugo cerviana Mollugo nudicaulis Mollugo pentaphylla Mollugo verticillata Monoclea gottschei Monomastix opisthostigma Monotropa uniflora Moringa oleifera Morus nigra Mougeotia sp Mumea americana Muntingia calabura Mydocarpus sp Myrica cerifera Myriophyllum aquaticum Myriopteris eatonii Myristica fragrans Nageia nagi Nandina domestica Nannochloris atomus Nannochloropsis oculata Narcissus viridiflorus Neckera douglasii Nelumbo sp Neocallitropsis pancheri Neochloris oleoabundans Neochloris sp Neochlorosarcina sp Nepenthes alata Nepeta cataria Nephrolepis exaltata Nephroselmis olivace Nephroselmis pyriformis Netrium digitus Neurachne alopecuroidea Neurachne annularis Neurachne lanigera Neurachne minor Neurachne munroi Neurachne tenuifolia Nicotiana sylvestris Niphotrichum elongatum Nolina atopocarpa Nolina bigelorii Nothoceros aenigmaticus Nothofagus obliqua Nothotsuga longibracteata Nucleotaenium eifelense Nuphar advena Nymphaea spp Nypa fruticans Nyssa ogeche Ochlochaete sp Ochna mossambicensis Ochna serrulata Ochromonas sp Odontosororia sp Oedogonium cardiacu Oedogonium foveolatum Oenothera affinis Oenothera berlandieri Oenothera biennis Oenothera clelandii Oenothera elata Oenothera elata hookeri Oenothera filiformis Oenothera gaura Oenothera grandiflora Oenothera grandis Oenothera laciniata Oenothera longituba Oenothera nana Oenothera picensis Oenothera rosea Oenothera serrulata Oenothera speciosa Oenothera suffulta suffulta Oenothera villaricae Olea europaea Oltmannsiellopsis viridis Oncidium sphacelatum Oncotheca balansae Onoclea sensibilis Onychonema laeve Oogamochlamys gigantea Ophioglossum vulgatum Opuntia sp Orchidantha maxillaroides Oresitrophe rupifraga Orobanche fasciculata Orthotrichum lyellii Osmunda sp Osmundastrum cinnamomeum Oxalis sp Oxera neriifolia Oxera pulchella Paeonia lactiflora Pandorina morum Panicum miliaceum A Papaver bracteatum Papaver rhoeas Papaver setigerum Papaver somniferum Papuacedrus papuana Parachlorella kessleri Paraneurachne muelleri Paraphymatoceros hallii Parasitaxus usta Passiflora caerulea Passiflora edulis Passiflora sp Paulownia fargesii Pavlova lutheri Pediastrum duplex Pedinomonas minor Pedinomonas tuberculata Peganum harmala Peliosanthese minor Pellia cf. Epiphylla Pellia neesiana Peltoboykinia watanabei Penium exiguum Pennantia corymbosa Peperomia fraseri Pereskia aculeata Persea borbonia Persursaria percursa Petalonia fascia Petiveria alliacea Peumus boldus Phacotus lenticularis Phaeomegaceros coriaceus Phelline lucida Phellodendron amurense Philadelphus inodorus Philonotis fontana Phlox drummondii Phlox sp Pholisma arenarium Phoradendron serotinum Phormium tenax Phycella aff. cyrtanthoides Phyla dulcis Phyllanthus sp Phyllocladus hypohyllus Phymatodocis nordstedtiana Physena madagascariensis Physocarpus opulifolius Phytolacca americana Phytolacca bogotensis Picea engelmanii Picocystis salinarum Pilgerodendron uviferum Pilularia globulifera Pinguicula agnata Pinguicula caudata Pinus jeffreyi Pinus parviflora Pinus ponderosa Pinus radiata Piper auritum Pirula salina Pistia stratioides Pittosporum resiniferum Pittosporum sahnianum Pityrogramma trifoliata Plagiomnium insigne Planophila laetevirens Planophila terrestris Planotaenium ohtanii Plantago coronopis Plantago virginica Platanthera clavellata Platanus occidentalis Platycladus orientalis Platycodon grandiflorus Platyspermation crassifolium Pleopeltis polypodioides Pleurastrum insigne Pleurotaenium trabecul Plumbago auriculata Podocarpus coriaceus Podocarpus rubens Podophyllum peltatum Pogostemon sp Polansia trachysperma Polycarpaea repens Polygala lutea Polygonum convolvulus Polypodium glycyrrhiza Polypodium hesperium Polypremum procumbens Polyscias fruticosa Polysiphonia japonica Polystichum acrostichoides Polytrichum commune Porella navicularis Porella pinnata Porphyra yezoensis Porphyridium cruentum Porphyridium purpureum Portulaca amilis Portulaca cryptopetala Portulaca grandiflora Portulaca mauii Portulaca molokaiensis Portulaca oleracea Portulaca pilosa Portulaca suffruticosa Portulaca umbraticola Posidonia australis Prasinococcus capsulatus Prasinoderma coloniale Prasiola crispa Prionitis divaricata Prorocentrum micans Proteomonas sulcata Prototheca wickerhamii Prumnopitys andina Prunella vulgaris Prunus prostrata Prymnesium parvum Pseudolarix amabilis Pseudolycopodiella caroliniana Pseudoscourfieldia marina Pseudotaxiphyllum elegans Pseudotaxus chienii Pseudotsuga menziesii Psilotum nudum Psychotria douarrei Psychotria ipecacuanha Psychotria marginata Pteris ensigormis Pteris vittata Pteromonas angulosa Pteromonas sp Ptilidium pulcherrimum Punctaria latifolia Punica granatum Pycnanthemum tenuifolium Pycnococcus provasolii Pyramimonas parkeae Pyrenacantha malvifolia Quassia amara Quercus shumardii Quillaja saponaria Racomitrium varium Radula lindenbergia Rauvolfia tetraphyla Rehmannia glutinosa Reseda odorata Retrophyllum minus Rhamnus caroliniana Rhamnus japonica Rhizophora mangle Rhodella violacea Rhodiola rosea Rhodochaete parvula Rhododendron scopulorum Rhodomonas sp Rhodophiala pratensis Rhynchostegium serrulatum Ribes aff. giraldii Ricinus communis Roridula gorgonias Rosa palustris Rosmarinus officinalis Roya obtusa Ruellia brittoniana Ruscus sp Sabal bermudana Sagittaria latifolia Saintpaulia ionantha Salix acutifolia Salix dasyclados Salix eriocephala Salix fargesii Salix purpurea Salix sachalinensis Salix viminalis Salvadora sp Salvia spp Sambucus canadensis Sanchezia sp Sanguinaria canadensis Sanguisorba minor Sansevieria trifasciata Santalum acuminatum Saponaria officianalis Sarcandra glabra Sarcobatus vermiculatus Sarcodes sanguinea Sargassum hemiphyllum Sargassum henslowianum Sargassum horneri Sargassum integerrimum Sargassum muticum Sargassum thunbergii Sargassum vachellianum Saruma henryi Sassafras albidum Saururus cernuus Saxegothaea conspicua Saxifraga stolonifera Scaevola sp Scapania nemorosa Scenedesmus dimorphus Sceptridium dissectum Scherffelia dubia Schiedea membranacea Schistochila sp Schizolaena sp Schlegelia parasitica Schlegelia parasitica B Schlegelia violacea Schwetschkeopsis fabronia Sciadopitys verticillata Scouleria aquatica Scourfieldia sp Scutellaria montana Scytosihon lomentaria Scytosiphon dotyo Selaginella apoda Selaginella lepidophylla Selaginella selaginoides Selaginella wallacei Selaginella willdenowii Senecio rowleyanus Senna hebecarpa Sequoia sempervirens Sequoiadendron giganteum Serenoa repens Sessuvium portulacastrum Sessuvium ventricosum Sideroxylon reclinatum Silene latifolia Silybum marianum Simmondsia chinensis Sinapis alba Sinningia tuberosa Sinojackia xylocarpa Sinotubimorpha guangdongensis Sisyrinchium angustifolium Smilax bona nox Solanum dulcamara Solanum lasiophyllum Solanum ptychanthum Solanum sisymbriifolium Solanum xanthocarpum Solenostemon scutellarioides Solidago canadensis Sorbus koehneana Souroubea exauriculata Spergularia media Spermatozopsis exsultans Spermatozopsis similis Sphaerocarpos texanus Sphagnum lescurii Sphagnum palustre Sphagnum recurvatum Spirogyra sp Spirotaenia minuta Spirotaenia sp Stachyurus praecox Stackhousia spathulata Stangeria eriopus Staphylea trifolia Staurastrum sebaldi Staurodesmus convergens Staurodesmus omearii Stemona tuberosa Stephanosphaera pluvialis Stichococcus bacillaris Stigeoclonium helveticum Strelitzia reginae Hodel, Richard G. Gitzendanner, Matthew A. Germain-Aubrey, Charlotte C. Liu, Xiaoxian Crowl, Andrew A. Sun, Miao Landis, Jacob B. Segovia-Salcedo, Maria Claudia Douglas, Norman A. Chen, Shichao Soltis, Douglas E. Soltis, Pamela S. Scaffolds |
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1KP microsatellite development neutral markers non-neutral markers NGS SSR transcriptomes Abies lasiocarpa Acacia argyrophylla Acacia pycnantha Acer negundo Acmopyle pancheri Acrosiphonia sp Actinidia chinensis Adiantum tenerum Aerva lanata Aerva persica Aesculus pavia Aextoxicon punctatum Agapanthus africanus Agastache rugosa Agathis robusta Agave tequilana Ailanthus altissima Ajuga reptans Akebia trifoliata Alangium chinense Allamanda cathartica Allionia incarnata Allionia spp Allium commutatum Allium sativum Alnus serrulata Aloe vera Alternanthera brasileana Alternanthera caracasana Alternanthera sessilis Alternanthera tenella Amaranthus cruentus Amaranthus retroflexus Amaryllis belladonna Amborella trichopoda Amelanchier canadensis Amentotaxus argotaenia Ancistrocladus tectorius Anemia tomentosa Anemone hupenhensis Anemone pulsatilla Angelica archangelica Angiopteris evecta Anisacanthus quadrifidas Ankistrodesmus sp Annona muricata Anomodon attenuatus Anthemis tinctoria Anthirrhinum majus Anthoceros agrestis Anticharis glandulosa Aphanochaete repens Aphanopetalum resinosum Apios americana Apocynum androsaemifolium Arabis alpina Araucaria rulei Ardisia humilis Ardisia revoluta Argemone mexicana Aristida stricta Aristolochia elegans Arucaria sp Aruncus dioicus Ascarina rubricaulis Asclepia curassavica Asparagus densiflorus Asplenium nidus Asplenium platyneuron Aster tataricus Asteromonas gracilis Astilbe chinensis Astragalus membranaceus Astragalus propinquus Athrotaxis cupressoides Athyrium filix femina Atriplex hortensis Atriplex prostrata Atriplex rosea Atropa belladonna Aucuba japonica Austrobaileya scandens Austrocedrus chilensis Austrotaxus spicata Avena fatua Azadirachta indica Azolla cf. caroliniana Bacopa caroliniana Balanophora fungosa Bambusina borreri Barbilophozia barbata Basella alba Bathycoccus prasinos Batis maritima Bauhinia tomentosa Begonia sp Berberidopsis beckleri Bergenia sp Beta maritima Betaphycus gelatinae Betula pendula Bischofia javanica Bituminaria bituminosa Bixa orellana Blasia sp Blastophysa cf. rhizopus Blechnum spicant Blutoparon vermiculare Boehmeria nivea Boerhavia cf. spiderwort Boerhavia dominnii Bolbocoleon piliferum Borya sphaerocephala Boswellia sacra Botryococcus braunii Botryococcus sudeticus Botryococcus terribilis Botrypus virginianus Bougainvillea spectabilis Boykinia jamesii Brachiomonas submarina Brassica nigra Brocchinia reducta Brodiaea sierrae Brugmansia sanguinea Bryopsis plumosa Bryum argenteum Buddleja sp Bursera simaruba Buxbaumia aphylla Buxus sempervirens Byblis gigantea Caiophora chuquitensis Calceolaria pinifolia Calliergon cordifolium Callitris gracilis Callitris macleayana Calocedrus decurrens Calycanthus floridus Calypogeia fissa Campanula delicatula Campanula erinus Camptotheca acuminata Canella winterana Canna sp Cannabis sativa Capnoides sempervirens Carteria crucifera Carteria obtusa Carthamus lanatus Carya glabra Cassytha filiformis Castanea crenata Castanea pumila Cathaya agryrophylla Cavendishia cuatrecasasii Cedrus libani Celsia arcturus Celtis occidentalis Centella asiatica Cephaleuros virescens Cephalotaxus harringtonia Cephalotus follicularis Ceramium kondoi Ceratocapnos vesicaria Ceratodon purpureus Ceratopteris thalictroides Cercidiphyllum japonicum Cercis canadensis Cercocarpus ledifolius Chaetopeltis orbicularis Chaetosphaeridium globosum Chamaecyparis lawsoniana Chamaseyce mesebyranthemum Chara vulgaris Cheilanthes arizonica Chelidonium majus Chenopodium quinoa Chionanthus retusus Chlamydomonas bilatus Chlamydomonas cribrum Chlamydomonas moewusii Chlamydomonas noctigama Chlamydomonas sp Chlorella minutissima Chlorogalum pomeridianum Chlorokybus atmophyticus Chloromonas oogama Chloromonas perforata Chloromonas reticulata Chloromonas rosa Chloromonas subdivisa Chloromonas tughillensi Chlorosarcinopsis halophila Chondropetalum tectorum Chondrus crispus Chroodactylon ornatu Chroomonas sp Chrysobalanus icaco Cibotium glaucum Cicerbita plumieri Cinnamomum camphora Cistus inflatus Citrus x paradisi Cladophora glomerata Cladrastis lutea Cleome gynandra Cleome violaceae Cleome viscosa Climacium dendroides Closterium lunula Coccomyxa pringsheimii Cochlearea officinalis Cocos nucifera Codariocalyx motorius Codium fragile Colchicum autumnale Coleochaete irregularis Coleochaete scutata Colpomenia sinuosa Conocephalum conicum Conopholis americana Convolvulus arvensis Conzya canadensis Copaifera officianalis Coriaria nepalensis Cornus floridana Corokia cotoneaster Corydalis linstowiana Cosmarium broomei Cosmarium granatum Cosmarium ochthodes Cosmarium subtumidum Cosmarium tinctum Cosmocladium cf. constrictum Cotoneaster transcaucasicus Crassula perforata Crepidomanes venosum Crossopetalum rhacoma Croton tiglium Cryptomeria japonica Cryptomonas curvata Culcita macrocarpa Cunninghamia lanceolata Cunonia capensis Cupressus dupreziana Curculigo sp Curcuma olena Curtisia dentata Cuscuta pentagonia Cyanastrum cordifolium Cyanella orchidofromis Cyanophora paradoxa Cyanoptyche gloeocystis Cyathea spinulosa Cycas micholitzii Cylindrocapsa geminella Cylindrocystis brebissonii Cylindrocystis cushleckae Cylindrocystis sp Cymbomonas sp Cymbopogon nardus Cyperus papyrus Cypselea humifusum Cyrilla racemiflora Cystopteris fragilis Cystopteris reevesiana Cystopteris utahensis Dacrycarpus compactus Dacrydium balansae Daenikera sp Danaea nodosa Danaea sp Daphne geraldii Daphniphyllum macropodum Datura metel Davallia fejeensis Delosperma echinatum Dendropemon caribaeus Dennstaedtia Deparia lobato Deschampsia cespitosa Desmanthus illinoensis Desmarestia viridis Desmidium aptogonum Deutzia scabra Dianthus sp Dichroa febrifuga Dicranum scoparium Dictyopteris undulata Didymochlaena truncatula Digitalis purpurea Dillenia indica Dioon edule Dioscorea villosa Diospyros malabarica Diphyscium foliosum Diplazium wichurae Dipsacus sativum Dipteris conjugata Diselma archeri Disporopsis pernyi Dolichomastix tenuilepi Dombeya burgessiae Draba aizoides Draba hispida Draba magellanica Draba oligosperma Draba ossetica Draba sachalinensis Drakea elastica Drimia altissima Drimys winteri Dryas octopetala Drypetes deplanchei Dumontia simplex Dunaliella primolecta Dunaliella salina Dunaliella tertiolecta Edgeworthia papyrifera Ehretia acuminata Elaeagnus pungens Elaeocarpus sylvestris Eleusine coracana Encalypta streptocarpa Encephalartos barteri Entocladia endozoica Entransia fimbriat Ephedra sinica Epifagus virginiana Epilobium sp Equisetum diffusum Equisetum hymale Eremosphaera viridi Erigeron speciosus Eriospermum lancifolia Erythroxylum coca Escallonia rubra Escallonia sp. cv. Newport Eschscholzia californica Euastrum affine Eucalyptus leucoxylon Eucheuma denticulatum Eucommia ulmoides Eudorina elegans Euglena sp Euphorbia pekinensis Eupomatia bennettii Euptelea pleiosperma Exacum affine Exocarpos cupressiformis Fagus sylvatica Falcatifolium taxoides Ficus religiosa Flaveria angustifolia Flaveria bidentis Flaveria brownii Flaveria cronquestii Flaveria kochiana Flaveria palmeri Flaveria pringlei Flaveria pubescens Flaveria sonorensis Flaveria trinervia Flaveria vaginata Fokienia hodginsii Fontinalis antipyretica Forestiera segregata Fouqueria macdougalli Francoa appendiculata Frankenia laevis Freycinetia multiflora Fritschiella tuberosa Frullania Galax urceolata Galphimia gracilis Garcinia livingstonei Garcinia oblongiflolia Gelsemium sempervirens Geminella sp Gentiana acaulis Geranium carolinianum Geum quellyon Ginkgo biloba Glaucocystis cf. nostochinearum Glaucosphaera vacuolata Gleditsia sinensis Gleditsia triacanthos Gloeochaete wittrockiana Gloeopeltis furcata Gloriosa superba Glycine soja Glycyrrhiza glabra Glycyrrhiza lepidota Glyptostrobus pensilis Gnetum montanum Golenkinia longispicula Gomortega keule Gompholobium polymorphum Gonatozygon kinahanii Gonium pectorale Goodyera pubescens Gracilaria asiatica Gracilaria blodgettii Gracilaria chouae Gracilaria lemaneiformi Grateloupia filicina Grateloupia livida Grateloupia turuturu Grevillea robusta Griselinia littoralis Griselinia racemosa Gunnera manicata Gymnocarpium dryopteris Gymnocladus dioicus Gymnogongrus ftabelliformis Gyrocarpus americanus Gyrostemon ramulosus Haemaria discolor Haematococcus pluviali Haematococcus pluvialis Hafniomonas reticulata Hakea drupaceae Hakea prostrata Halocarpus bidwillii Halochlorococcum marinum Hamamelis virginiana Hedera helix Helenium autumnale Helicodictyon planctonicum Heliconia sp Heliotropium calcicola Heliotropium convolvulaceum Heliotropium filiforme Heliotropium greggii Heliotropium karwinsky Heliotropium mendocinum Heliotropium racemosum Heliotropium sp Heliotropium tenellum Heliotropium texanum Helonias bullata Helwingia japonica Hemerocallis sp Hemerocallis spp Hemiselmis virescens Heracleum lanatum Hesperaloe parviflora Heterochlamydomonas inaequalis Heteropyxis natalensis Heterosiphonia pulchra Heuchera sanguinea Hibiscus cannabinus Hilleria latifolia Hizikia fusifrome Holarrhena pubescens Homalosorus pycnocarpos Hormidiella sp Houttuynia cordata Humulus lupulus Huperzia lucidula Huperzia myrisinites Huperzia selago Huperzia squarrosa Hydrangea quercifolia Hydrastis canadensis Hydrocotyle umbellata Hymenophyllum bivalve Hymenophyllum cupressiforme Hypecoum procumbens Hypericum perforatum Hypnum subimponens Idiospermum australiense Ignatius tetrasporus Ilex paraguariensis Ilex sp Ilex vomitoria Illicium floridanum Illicium parviflorum Impatiens balsamifera Interfilum paradoxum Inula helenium Ipomoea coccinea Ipomoea hederacea Ipomoea indica Ipomoea lindheimeri Ipomoea lobata Ipomoea nil Ipomoea pubescens Ipomoea purpurea Ipomoea quamoclit Ishige okamurai Isochrysis sp Isoetes sp Isoetes tegetiformans Itea virginica Jacquinia sp Johnsonia pubescens Juglans nigra Juncus inflexus Juniperus scopulorum Kadsura heteroclite Kalanchoe crenato diagremontiana Kaliphora madagascariensis Kappaphycus alvarezii Kerria japonica Keteleeria evelyniana Kigelia africana Kjellmaniella crassifolia Klebsormidium subtile Kochia scoparia Koeberlina spinosa Krameria lanceolata Lactuca graminifolia Lagarostrobos franklinii Lagerstroemia indica Laminaria japonica Lantana camara Larix speciosa Larrea tridentata Lathyrus sativus Laurelia sempervirens Lavandula angustifolia Ledum palustre Leiosporoceros dussii Lennoa madreporoides Leontopodium alpinum Leonurus japonicus Lepidosperma gibsonii Leptosira obovata Leucobryum glaucum Licania michauxii Ligustrum sinense Lilium sargentiae Limnanthes douglassii Limonium spectabile Lindenbergia philippensis Lindera benzoin Lindsaea linearis Linum bienne Linum flavum Linum grandiflorum Linum hirsutum Linum leonii Linum lewisii Linum macraei Linum perenne Linum strictum Linum tenuifolium Linum usitatissimum Liquidambar styraciflua Litchi chinensis Lobelia siphilitica Lobochlamys segnis Lobomonas rostrata Lomandra longifolia Lonicera japonica Lophophora williamsii Loropetalum chinense Ludovia sp Lunularia cruciata Lupinus angustifolius Lupinus polyphyllus Lycium barbarum Lycium sp Lycopersicon cheesmanii Lycopodiella apressa Lycopodium annotinum Lycopodium deuterodensum Lygodium japonicum Maesa lanceolata Magnolia grandiflora Maianthemum canadense Maianthemum sp Mallomonas sp Malus baccata Manihot grahamii Manilkara zapota Manoao colensoi Mansoa alliacea Mantoniella squamata Mapania palustris Maranta leuconeura Marattia attenuata Marchantia emarginata Marchantia paleacea Marchantia polymorpha Marrubium vulgare Masdevallia yuangensis Matricaria matricariodes Mazzaella japonica Medinilla magnifica Megaceros tosanus Megaceros vincentianus Melaleuca quinquenervia Melia azedarach Meliosma cuneifolia Melissa officinalis Menyanthes trifoliata Mertensia paniculata Mesostigma viride Mesotaenium braunii Mesotaenium caldariorum Mesotaenium endlicherianum Mesotaenium kramstei Metasequoia glyptostroboides Metzgeria crassipilis Michelia maudiae Micrasterias fimbriata Microbiota decussata Microcachrys tetragona Microspora cf. tumidula Microstegium vimineum Microstrobos fitzgeraldii Microtea debilis Microthamnion kuetzigianum Mirabilis jalapa Mitella pentandra Mollugo cerviana Mollugo nudicaulis Mollugo pentaphylla Mollugo verticillata Monoclea gottschei Monomastix opisthostigma Monotropa uniflora Moringa oleifera Morus nigra Mougeotia sp Mumea americana Muntingia calabura Mydocarpus sp Myrica cerifera Myriophyllum aquaticum Myriopteris eatonii Myristica fragrans Nageia nagi Nandina domestica Nannochloris atomus Nannochloropsis oculata Narcissus viridiflorus Neckera douglasii Nelumbo sp Neocallitropsis pancheri Neochloris oleoabundans Neochloris sp Neochlorosarcina sp Nepenthes alata Nepeta cataria Nephrolepis exaltata Nephroselmis olivace Nephroselmis pyriformis Netrium digitus Neurachne alopecuroidea Neurachne annularis Neurachne lanigera Neurachne minor Neurachne munroi Neurachne tenuifolia Nicotiana sylvestris Niphotrichum elongatum Nolina atopocarpa Nolina bigelorii Nothoceros aenigmaticus Nothofagus obliqua Nothotsuga longibracteata Nucleotaenium eifelense Nuphar advena Nymphaea spp Nypa fruticans Nyssa ogeche Ochlochaete sp Ochna mossambicensis Ochna serrulata Ochromonas sp Odontosororia sp Oedogonium cardiacu Oedogonium foveolatum Oenothera affinis Oenothera berlandieri Oenothera biennis Oenothera clelandii Oenothera elata Oenothera elata hookeri Oenothera filiformis Oenothera gaura Oenothera grandiflora Oenothera grandis Oenothera laciniata Oenothera longituba Oenothera nana Oenothera picensis Oenothera rosea Oenothera serrulata Oenothera speciosa Oenothera suffulta suffulta Oenothera villaricae Olea europaea Oltmannsiellopsis viridis Oncidium sphacelatum Oncotheca balansae Onoclea sensibilis Onychonema laeve Oogamochlamys gigantea Ophioglossum vulgatum Opuntia sp Orchidantha maxillaroides Oresitrophe rupifraga Orobanche fasciculata Orthotrichum lyellii Osmunda sp Osmundastrum cinnamomeum Oxalis sp Oxera neriifolia Oxera pulchella Paeonia lactiflora Pandorina morum Panicum miliaceum A Papaver bracteatum Papaver rhoeas Papaver setigerum Papaver somniferum Papuacedrus papuana Parachlorella kessleri Paraneurachne muelleri Paraphymatoceros hallii Parasitaxus usta Passiflora caerulea Passiflora edulis Passiflora sp Paulownia fargesii Pavlova lutheri Pediastrum duplex Pedinomonas minor Pedinomonas tuberculata Peganum harmala Peliosanthese minor Pellia cf. Epiphylla Pellia neesiana Peltoboykinia watanabei Penium exiguum Pennantia corymbosa Peperomia fraseri Pereskia aculeata Persea borbonia Persursaria percursa Petalonia fascia Petiveria alliacea Peumus boldus Phacotus lenticularis Phaeomegaceros coriaceus Phelline lucida Phellodendron amurense Philadelphus inodorus Philonotis fontana Phlox drummondii Phlox sp Pholisma arenarium Phoradendron serotinum Phormium tenax Phycella aff. cyrtanthoides Phyla dulcis Phyllanthus sp Phyllocladus hypohyllus Phymatodocis nordstedtiana Physena madagascariensis Physocarpus opulifolius Phytolacca americana Phytolacca bogotensis Picea engelmanii Picocystis salinarum Pilgerodendron uviferum Pilularia globulifera Pinguicula agnata Pinguicula caudata Pinus jeffreyi Pinus parviflora Pinus ponderosa Pinus radiata Piper auritum Pirula salina Pistia stratioides Pittosporum resiniferum Pittosporum sahnianum Pityrogramma trifoliata Plagiomnium insigne Planophila laetevirens Planophila terrestris Planotaenium ohtanii Plantago coronopis Plantago virginica Platanthera clavellata Platanus occidentalis Platycladus orientalis Platycodon grandiflorus Platyspermation crassifolium Pleopeltis polypodioides Pleurastrum insigne Pleurotaenium trabecul Plumbago auriculata Podocarpus coriaceus Podocarpus rubens Podophyllum peltatum Pogostemon sp Polansia trachysperma Polycarpaea repens Polygala lutea Polygonum convolvulus Polypodium glycyrrhiza Polypodium hesperium Polypremum procumbens Polyscias fruticosa Polysiphonia japonica Polystichum acrostichoides Polytrichum commune Porella navicularis Porella pinnata Porphyra yezoensis Porphyridium cruentum Porphyridium purpureum Portulaca amilis Portulaca cryptopetala Portulaca grandiflora Portulaca mauii Portulaca molokaiensis Portulaca oleracea Portulaca pilosa Portulaca suffruticosa Portulaca umbraticola Posidonia australis Prasinococcus capsulatus Prasinoderma coloniale Prasiola crispa Prionitis divaricata Prorocentrum micans Proteomonas sulcata Prototheca wickerhamii Prumnopitys andina Prunella vulgaris Prunus prostrata Prymnesium parvum Pseudolarix amabilis Pseudolycopodiella caroliniana Pseudoscourfieldia marina Pseudotaxiphyllum elegans Pseudotaxus chienii Pseudotsuga menziesii Psilotum nudum Psychotria douarrei Psychotria ipecacuanha Psychotria marginata Pteris ensigormis Pteris vittata Pteromonas angulosa Pteromonas sp Ptilidium pulcherrimum Punctaria latifolia Punica granatum Pycnanthemum tenuifolium Pycnococcus provasolii Pyramimonas parkeae Pyrenacantha malvifolia Quassia amara Quercus shumardii Quillaja saponaria Racomitrium varium Radula lindenbergia Rauvolfia tetraphyla Rehmannia glutinosa Reseda odorata Retrophyllum minus Rhamnus caroliniana Rhamnus japonica Rhizophora mangle Rhodella violacea Rhodiola rosea Rhodochaete parvula Rhododendron scopulorum Rhodomonas sp Rhodophiala pratensis Rhynchostegium serrulatum Ribes aff. giraldii Ricinus communis Roridula gorgonias Rosa palustris Rosmarinus officinalis Roya obtusa Ruellia brittoniana Ruscus sp Sabal bermudana Sagittaria latifolia Saintpaulia ionantha Salix acutifolia Salix dasyclados Salix eriocephala Salix fargesii Salix purpurea Salix sachalinensis Salix viminalis Salvadora sp Salvia spp Sambucus canadensis Sanchezia sp Sanguinaria canadensis Sanguisorba minor Sansevieria trifasciata Santalum acuminatum Saponaria officianalis Sarcandra glabra Sarcobatus vermiculatus Sarcodes sanguinea Sargassum hemiphyllum Sargassum henslowianum Sargassum horneri Sargassum integerrimum Sargassum muticum Sargassum thunbergii Sargassum vachellianum Saruma henryi Sassafras albidum Saururus cernuus Saxegothaea conspicua Saxifraga stolonifera Scaevola sp Scapania nemorosa Scenedesmus dimorphus Sceptridium dissectum Scherffelia dubia Schiedea membranacea Schistochila sp Schizolaena sp Schlegelia parasitica Schlegelia parasitica B Schlegelia violacea Schwetschkeopsis fabronia Sciadopitys verticillata Scouleria aquatica Scourfieldia sp Scutellaria montana Scytosihon lomentaria Scytosiphon dotyo Selaginella apoda Selaginella lepidophylla Selaginella selaginoides Selaginella wallacei Selaginella willdenowii Senecio rowleyanus Senna hebecarpa Sequoia sempervirens Sequoiadendron giganteum Serenoa repens Sessuvium portulacastrum Sessuvium ventricosum Sideroxylon reclinatum Silene latifolia Silybum marianum Simmondsia chinensis Sinapis alba Sinningia tuberosa Sinojackia xylocarpa Sinotubimorpha guangdongensis Sisyrinchium angustifolium Smilax bona nox Solanum dulcamara Solanum lasiophyllum Solanum ptychanthum Solanum sisymbriifolium Solanum xanthocarpum Solenostemon scutellarioides Solidago canadensis Sorbus koehneana Souroubea exauriculata Spergularia media Spermatozopsis exsultans Spermatozopsis similis Sphaerocarpos texanus Sphagnum lescurii Sphagnum palustre Sphagnum recurvatum Spirogyra sp Spirotaenia minuta Spirotaenia sp Stachyurus praecox Stackhousia spathulata Stangeria eriopus Staphylea trifolia Staurastrum sebaldi Staurodesmus convergens Staurodesmus omearii Stemona tuberosa Stephanosphaera pluvialis Stichococcus bacillaris Stigeoclonium helveticum Strelitzia reginae |
| description |
The Scaffolds.zip file is a compressed zip file containing a directory with the scaffolds corresponding to the microsatellite loci. The Scaffolds directory contains the sequence of the scaffolds that had microsatellites identified on them. The files are bz2 compressed zip files. The unzipped file is a fasta file with all of the scaffolds corresponding to the loci in the LocusInfo directory. |
| format |
Dataset |
| author |
Hodel, Richard G. Gitzendanner, Matthew A. Germain-Aubrey, Charlotte C. Liu, Xiaoxian Crowl, Andrew A. Sun, Miao Landis, Jacob B. Segovia-Salcedo, Maria Claudia Douglas, Norman A. Chen, Shichao Soltis, Douglas E. Soltis, Pamela S. |
| author_facet |
Hodel, Richard G. Gitzendanner, Matthew A. Germain-Aubrey, Charlotte C. Liu, Xiaoxian Crowl, Andrew A. Sun, Miao Landis, Jacob B. Segovia-Salcedo, Maria Claudia Douglas, Norman A. Chen, Shichao Soltis, Douglas E. Soltis, Pamela S. |
| author_sort |
Hodel, Richard G. |
| title |
Scaffolds |
| title_short |
Scaffolds |
| title_full |
Scaffolds |
| title_fullStr |
Scaffolds |
| title_full_unstemmed |
Scaffolds |
| title_sort |
scaffolds |
| publisher |
Dryad Digital Repository |
| publishDate |
2016 |
| url |
https://dx.doi.org/10.5061/dryad.rb7h0/3 http://datadryad.org/resource/doi:10.5061/dryad.rb7h0/3 |
| long_lat |
ENVELOPE(9.951,9.951,63.557,63.557) ENVELOPE(-60.586,-60.586,-62.996,-62.996) ENVELOPE(-62.000,-62.000,-62.833,-62.833) ENVELOPE(-65.734,-65.734,-66.229,-66.229) ENVELOPE(-45.479,-45.479,-60.580,-60.580) ENVELOPE(8.113,8.113,62.967,62.967) ENVELOPE(-66.828,-66.828,-68.182,-68.182) ENVELOPE(-60.633,-60.633,-62.650,-62.650) ENVELOPE(-61.250,-61.250,-62.633,-62.633) |
| geographic |
Fissa Fontana Larrea Malus Nivea Nypa Rhamnus Ribes Rugosa |
| geographic_facet |
Fissa Fontana Larrea Malus Nivea Nypa Rhamnus Ribes Rugosa |
| genre |
Dryas octopetala |
| genre_facet |
Dryas octopetala |
| op_relation |
https://dx.doi.org/10.5061/dryad.rb7h0 |
| op_rights |
http://creativecommons.org/publicdomain/zero/1.0 |
| op_rightsnorm |
CC0 |
| op_doi |
https://doi.org/10.5061/dryad.rb7h0/3 https://doi.org/10.5061/dryad.rb7h0 |
| _version_ |
1766398451182993408 |
| spelling |
ftdatacite:10.5061/dryad.rb7h0/3 2023-05-15T16:02:46+02:00 Scaffolds Hodel, Richard G. Gitzendanner, Matthew A. Germain-Aubrey, Charlotte C. Liu, Xiaoxian Crowl, Andrew A. Sun, Miao Landis, Jacob B. Segovia-Salcedo, Maria Claudia Douglas, Norman A. Chen, Shichao Soltis, Douglas E. Soltis, Pamela S. 2016 https://dx.doi.org/10.5061/dryad.rb7h0/3 http://datadryad.org/resource/doi:10.5061/dryad.rb7h0/3 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.rb7h0 http://creativecommons.org/publicdomain/zero/1.0 CC0 1KP microsatellite development neutral markers non-neutral markers NGS SSR transcriptomes Abies lasiocarpa Acacia argyrophylla Acacia pycnantha Acer negundo Acmopyle pancheri Acrosiphonia sp Actinidia chinensis Adiantum tenerum Aerva lanata Aerva persica Aesculus pavia Aextoxicon punctatum Agapanthus africanus Agastache rugosa Agathis robusta Agave tequilana Ailanthus altissima Ajuga reptans Akebia trifoliata Alangium chinense Allamanda cathartica Allionia incarnata Allionia spp Allium commutatum Allium sativum Alnus serrulata Aloe vera Alternanthera brasileana Alternanthera caracasana Alternanthera sessilis Alternanthera tenella Amaranthus cruentus Amaranthus retroflexus Amaryllis belladonna Amborella trichopoda Amelanchier canadensis Amentotaxus argotaenia Ancistrocladus tectorius Anemia tomentosa Anemone hupenhensis Anemone pulsatilla Angelica archangelica Angiopteris evecta Anisacanthus quadrifidas Ankistrodesmus sp Annona muricata Anomodon attenuatus Anthemis tinctoria Anthirrhinum majus Anthoceros agrestis Anticharis glandulosa Aphanochaete repens Aphanopetalum resinosum Apios americana Apocynum androsaemifolium Arabis alpina Araucaria rulei Ardisia humilis Ardisia revoluta Argemone mexicana Aristida stricta Aristolochia elegans Arucaria sp Aruncus dioicus Ascarina rubricaulis Asclepia curassavica Asparagus densiflorus Asplenium nidus Asplenium platyneuron Aster tataricus Asteromonas gracilis Astilbe chinensis Astragalus membranaceus Astragalus propinquus Athrotaxis cupressoides Athyrium filix femina Atriplex hortensis Atriplex prostrata Atriplex rosea Atropa belladonna Aucuba japonica Austrobaileya scandens Austrocedrus chilensis Austrotaxus spicata Avena fatua Azadirachta indica Azolla cf. caroliniana Bacopa caroliniana Balanophora fungosa Bambusina borreri Barbilophozia barbata Basella alba Bathycoccus prasinos Batis maritima Bauhinia tomentosa Begonia sp Berberidopsis beckleri Bergenia sp Beta maritima Betaphycus gelatinae Betula pendula Bischofia javanica Bituminaria bituminosa Bixa orellana Blasia sp Blastophysa cf. rhizopus Blechnum spicant Blutoparon vermiculare Boehmeria nivea Boerhavia cf. spiderwort Boerhavia dominnii Bolbocoleon piliferum Borya sphaerocephala Boswellia sacra Botryococcus braunii Botryococcus sudeticus Botryococcus terribilis Botrypus virginianus Bougainvillea spectabilis Boykinia jamesii Brachiomonas submarina Brassica nigra Brocchinia reducta Brodiaea sierrae Brugmansia sanguinea Bryopsis plumosa Bryum argenteum Buddleja sp Bursera simaruba Buxbaumia aphylla Buxus sempervirens Byblis gigantea Caiophora chuquitensis Calceolaria pinifolia Calliergon cordifolium Callitris gracilis Callitris macleayana Calocedrus decurrens Calycanthus floridus Calypogeia fissa Campanula delicatula Campanula erinus Camptotheca acuminata Canella winterana Canna sp Cannabis sativa Capnoides sempervirens Carteria crucifera Carteria obtusa Carthamus lanatus Carya glabra Cassytha filiformis Castanea crenata Castanea pumila Cathaya agryrophylla Cavendishia cuatrecasasii Cedrus libani Celsia arcturus Celtis occidentalis Centella asiatica Cephaleuros virescens Cephalotaxus harringtonia Cephalotus follicularis Ceramium kondoi Ceratocapnos vesicaria Ceratodon purpureus Ceratopteris thalictroides Cercidiphyllum japonicum Cercis canadensis Cercocarpus ledifolius Chaetopeltis orbicularis Chaetosphaeridium globosum Chamaecyparis lawsoniana Chamaseyce mesebyranthemum Chara vulgaris Cheilanthes arizonica Chelidonium majus Chenopodium quinoa Chionanthus retusus Chlamydomonas bilatus Chlamydomonas cribrum Chlamydomonas moewusii Chlamydomonas noctigama Chlamydomonas sp Chlorella minutissima Chlorogalum pomeridianum Chlorokybus atmophyticus Chloromonas oogama Chloromonas perforata Chloromonas reticulata Chloromonas rosa Chloromonas subdivisa Chloromonas tughillensi Chlorosarcinopsis halophila Chondropetalum tectorum Chondrus crispus Chroodactylon ornatu Chroomonas sp Chrysobalanus icaco Cibotium glaucum Cicerbita plumieri Cinnamomum camphora Cistus inflatus Citrus x paradisi Cladophora glomerata Cladrastis lutea Cleome gynandra Cleome violaceae Cleome viscosa Climacium dendroides Closterium lunula Coccomyxa pringsheimii Cochlearea officinalis Cocos nucifera Codariocalyx motorius Codium fragile Colchicum autumnale Coleochaete irregularis Coleochaete scutata Colpomenia sinuosa Conocephalum conicum Conopholis americana Convolvulus arvensis Conzya canadensis Copaifera officianalis Coriaria nepalensis Cornus floridana Corokia cotoneaster Corydalis linstowiana Cosmarium broomei Cosmarium granatum Cosmarium ochthodes Cosmarium subtumidum Cosmarium tinctum Cosmocladium cf. constrictum Cotoneaster transcaucasicus Crassula perforata Crepidomanes venosum Crossopetalum rhacoma Croton tiglium Cryptomeria japonica Cryptomonas curvata Culcita macrocarpa Cunninghamia lanceolata Cunonia capensis Cupressus dupreziana Curculigo sp Curcuma olena Curtisia dentata Cuscuta pentagonia Cyanastrum cordifolium Cyanella orchidofromis Cyanophora paradoxa Cyanoptyche gloeocystis Cyathea spinulosa Cycas micholitzii Cylindrocapsa geminella Cylindrocystis brebissonii Cylindrocystis cushleckae Cylindrocystis sp Cymbomonas sp Cymbopogon nardus Cyperus papyrus Cypselea humifusum Cyrilla racemiflora Cystopteris fragilis Cystopteris reevesiana Cystopteris utahensis Dacrycarpus compactus Dacrydium balansae Daenikera sp Danaea nodosa Danaea sp Daphne geraldii Daphniphyllum macropodum Datura metel Davallia fejeensis Delosperma echinatum Dendropemon caribaeus Dennstaedtia Deparia lobato Deschampsia cespitosa Desmanthus illinoensis Desmarestia viridis Desmidium aptogonum Deutzia scabra Dianthus sp Dichroa febrifuga Dicranum scoparium Dictyopteris undulata Didymochlaena truncatula Digitalis purpurea Dillenia indica Dioon edule Dioscorea villosa Diospyros malabarica Diphyscium foliosum Diplazium wichurae Dipsacus sativum Dipteris conjugata Diselma archeri Disporopsis pernyi Dolichomastix tenuilepi Dombeya burgessiae Draba aizoides Draba hispida Draba magellanica Draba oligosperma Draba ossetica Draba sachalinensis Drakea elastica Drimia altissima Drimys winteri Dryas octopetala Drypetes deplanchei Dumontia simplex Dunaliella primolecta Dunaliella salina Dunaliella tertiolecta Edgeworthia papyrifera Ehretia acuminata Elaeagnus pungens Elaeocarpus sylvestris Eleusine coracana Encalypta streptocarpa Encephalartos barteri Entocladia endozoica Entransia fimbriat Ephedra sinica Epifagus virginiana Epilobium sp Equisetum diffusum Equisetum hymale Eremosphaera viridi Erigeron speciosus Eriospermum lancifolia Erythroxylum coca Escallonia rubra Escallonia sp. cv. Newport Eschscholzia californica Euastrum affine Eucalyptus leucoxylon Eucheuma denticulatum Eucommia ulmoides Eudorina elegans Euglena sp Euphorbia pekinensis Eupomatia bennettii Euptelea pleiosperma Exacum affine Exocarpos cupressiformis Fagus sylvatica Falcatifolium taxoides Ficus religiosa Flaveria angustifolia Flaveria bidentis Flaveria brownii Flaveria cronquestii Flaveria kochiana Flaveria palmeri Flaveria pringlei Flaveria pubescens Flaveria sonorensis Flaveria trinervia Flaveria vaginata Fokienia hodginsii Fontinalis antipyretica Forestiera segregata Fouqueria macdougalli Francoa appendiculata Frankenia laevis Freycinetia multiflora Fritschiella tuberosa Frullania Galax urceolata Galphimia gracilis Garcinia livingstonei Garcinia oblongiflolia Gelsemium sempervirens Geminella sp Gentiana acaulis Geranium carolinianum Geum quellyon Ginkgo biloba Glaucocystis cf. nostochinearum Glaucosphaera vacuolata Gleditsia sinensis Gleditsia triacanthos Gloeochaete wittrockiana Gloeopeltis furcata Gloriosa superba Glycine soja Glycyrrhiza glabra Glycyrrhiza lepidota Glyptostrobus pensilis Gnetum montanum Golenkinia longispicula Gomortega keule Gompholobium polymorphum Gonatozygon kinahanii Gonium pectorale Goodyera pubescens Gracilaria asiatica Gracilaria blodgettii Gracilaria chouae Gracilaria lemaneiformi Grateloupia filicina Grateloupia livida Grateloupia turuturu Grevillea robusta Griselinia littoralis Griselinia racemosa Gunnera manicata Gymnocarpium dryopteris Gymnocladus dioicus Gymnogongrus ftabelliformis Gyrocarpus americanus Gyrostemon ramulosus Haemaria discolor Haematococcus pluviali Haematococcus pluvialis Hafniomonas reticulata Hakea drupaceae Hakea prostrata Halocarpus bidwillii Halochlorococcum marinum Hamamelis virginiana Hedera helix Helenium autumnale Helicodictyon planctonicum Heliconia sp Heliotropium calcicola Heliotropium convolvulaceum Heliotropium filiforme Heliotropium greggii Heliotropium karwinsky Heliotropium mendocinum Heliotropium racemosum Heliotropium sp Heliotropium tenellum Heliotropium texanum Helonias bullata Helwingia japonica Hemerocallis sp Hemerocallis spp Hemiselmis virescens Heracleum lanatum Hesperaloe parviflora Heterochlamydomonas inaequalis Heteropyxis natalensis Heterosiphonia pulchra Heuchera sanguinea Hibiscus cannabinus Hilleria latifolia Hizikia fusifrome Holarrhena pubescens Homalosorus pycnocarpos Hormidiella sp Houttuynia cordata Humulus lupulus Huperzia lucidula Huperzia myrisinites Huperzia selago Huperzia squarrosa Hydrangea quercifolia Hydrastis canadensis Hydrocotyle umbellata Hymenophyllum bivalve Hymenophyllum cupressiforme Hypecoum procumbens Hypericum perforatum Hypnum subimponens Idiospermum australiense Ignatius tetrasporus Ilex paraguariensis Ilex sp Ilex vomitoria Illicium floridanum Illicium parviflorum Impatiens balsamifera Interfilum paradoxum Inula helenium Ipomoea coccinea Ipomoea hederacea Ipomoea indica Ipomoea lindheimeri Ipomoea lobata Ipomoea nil Ipomoea pubescens Ipomoea purpurea Ipomoea quamoclit Ishige okamurai Isochrysis sp Isoetes sp Isoetes tegetiformans Itea virginica Jacquinia sp Johnsonia pubescens Juglans nigra Juncus inflexus Juniperus scopulorum Kadsura heteroclite Kalanchoe crenato diagremontiana Kaliphora madagascariensis Kappaphycus alvarezii Kerria japonica Keteleeria evelyniana Kigelia africana Kjellmaniella crassifolia Klebsormidium subtile Kochia scoparia Koeberlina spinosa Krameria lanceolata Lactuca graminifolia Lagarostrobos franklinii Lagerstroemia indica Laminaria japonica Lantana camara Larix speciosa Larrea tridentata Lathyrus sativus Laurelia sempervirens Lavandula angustifolia Ledum palustre Leiosporoceros dussii Lennoa madreporoides Leontopodium alpinum Leonurus japonicus Lepidosperma gibsonii Leptosira obovata Leucobryum glaucum Licania michauxii Ligustrum sinense Lilium sargentiae Limnanthes douglassii Limonium spectabile Lindenbergia philippensis Lindera benzoin Lindsaea linearis Linum bienne Linum flavum Linum grandiflorum Linum hirsutum Linum leonii Linum lewisii Linum macraei Linum perenne Linum strictum Linum tenuifolium Linum usitatissimum Liquidambar styraciflua Litchi chinensis Lobelia siphilitica Lobochlamys segnis Lobomonas rostrata Lomandra longifolia Lonicera japonica Lophophora williamsii Loropetalum chinense Ludovia sp Lunularia cruciata Lupinus angustifolius Lupinus polyphyllus Lycium barbarum Lycium sp Lycopersicon cheesmanii Lycopodiella apressa Lycopodium annotinum Lycopodium deuterodensum Lygodium japonicum Maesa lanceolata Magnolia grandiflora Maianthemum canadense Maianthemum sp Mallomonas sp Malus baccata Manihot grahamii Manilkara zapota Manoao colensoi Mansoa alliacea Mantoniella squamata Mapania palustris Maranta leuconeura Marattia attenuata Marchantia emarginata Marchantia paleacea Marchantia polymorpha Marrubium vulgare Masdevallia yuangensis Matricaria matricariodes Mazzaella japonica Medinilla magnifica Megaceros tosanus Megaceros vincentianus Melaleuca quinquenervia Melia azedarach Meliosma cuneifolia Melissa officinalis Menyanthes trifoliata Mertensia paniculata Mesostigma viride Mesotaenium braunii Mesotaenium caldariorum Mesotaenium endlicherianum Mesotaenium kramstei Metasequoia glyptostroboides Metzgeria crassipilis Michelia maudiae Micrasterias fimbriata Microbiota decussata Microcachrys tetragona Microspora cf. tumidula Microstegium vimineum Microstrobos fitzgeraldii Microtea debilis Microthamnion kuetzigianum Mirabilis jalapa Mitella pentandra Mollugo cerviana Mollugo nudicaulis Mollugo pentaphylla Mollugo verticillata Monoclea gottschei Monomastix opisthostigma Monotropa uniflora Moringa oleifera Morus nigra Mougeotia sp Mumea americana Muntingia calabura Mydocarpus sp Myrica cerifera Myriophyllum aquaticum Myriopteris eatonii Myristica fragrans Nageia nagi Nandina domestica Nannochloris atomus Nannochloropsis oculata Narcissus viridiflorus Neckera douglasii Nelumbo sp Neocallitropsis pancheri Neochloris oleoabundans Neochloris sp Neochlorosarcina sp Nepenthes alata Nepeta cataria Nephrolepis exaltata Nephroselmis olivace Nephroselmis pyriformis Netrium digitus Neurachne alopecuroidea Neurachne annularis Neurachne lanigera Neurachne minor Neurachne munroi Neurachne tenuifolia Nicotiana sylvestris Niphotrichum elongatum Nolina atopocarpa Nolina bigelorii Nothoceros aenigmaticus Nothofagus obliqua Nothotsuga longibracteata Nucleotaenium eifelense Nuphar advena Nymphaea spp Nypa fruticans Nyssa ogeche Ochlochaete sp Ochna mossambicensis Ochna serrulata Ochromonas sp Odontosororia sp Oedogonium cardiacu Oedogonium foveolatum Oenothera affinis Oenothera berlandieri Oenothera biennis Oenothera clelandii Oenothera elata Oenothera elata hookeri Oenothera filiformis Oenothera gaura Oenothera grandiflora Oenothera grandis Oenothera laciniata Oenothera longituba Oenothera nana Oenothera picensis Oenothera rosea Oenothera serrulata Oenothera speciosa Oenothera suffulta suffulta Oenothera villaricae Olea europaea Oltmannsiellopsis viridis Oncidium sphacelatum Oncotheca balansae Onoclea sensibilis Onychonema laeve Oogamochlamys gigantea Ophioglossum vulgatum Opuntia sp Orchidantha maxillaroides Oresitrophe rupifraga Orobanche fasciculata Orthotrichum lyellii Osmunda sp Osmundastrum cinnamomeum Oxalis sp Oxera neriifolia Oxera pulchella Paeonia lactiflora Pandorina morum Panicum miliaceum A Papaver bracteatum Papaver rhoeas Papaver setigerum Papaver somniferum Papuacedrus papuana Parachlorella kessleri Paraneurachne muelleri Paraphymatoceros hallii Parasitaxus usta Passiflora caerulea Passiflora edulis Passiflora sp Paulownia fargesii Pavlova lutheri Pediastrum duplex Pedinomonas minor Pedinomonas tuberculata Peganum harmala Peliosanthese minor Pellia cf. Epiphylla Pellia neesiana Peltoboykinia watanabei Penium exiguum Pennantia corymbosa Peperomia fraseri Pereskia aculeata Persea borbonia Persursaria percursa Petalonia fascia Petiveria alliacea Peumus boldus Phacotus lenticularis Phaeomegaceros coriaceus Phelline lucida Phellodendron amurense Philadelphus inodorus Philonotis fontana Phlox drummondii Phlox sp Pholisma arenarium Phoradendron serotinum Phormium tenax Phycella aff. cyrtanthoides Phyla dulcis Phyllanthus sp Phyllocladus hypohyllus Phymatodocis nordstedtiana Physena madagascariensis Physocarpus opulifolius Phytolacca americana Phytolacca bogotensis Picea engelmanii Picocystis salinarum Pilgerodendron uviferum Pilularia globulifera Pinguicula agnata Pinguicula caudata Pinus jeffreyi Pinus parviflora Pinus ponderosa Pinus radiata Piper auritum Pirula salina Pistia stratioides Pittosporum resiniferum Pittosporum sahnianum Pityrogramma trifoliata Plagiomnium insigne Planophila laetevirens Planophila terrestris Planotaenium ohtanii Plantago coronopis Plantago virginica Platanthera clavellata Platanus occidentalis Platycladus orientalis Platycodon grandiflorus Platyspermation crassifolium Pleopeltis polypodioides Pleurastrum insigne Pleurotaenium trabecul Plumbago auriculata Podocarpus coriaceus Podocarpus rubens Podophyllum peltatum Pogostemon sp Polansia trachysperma Polycarpaea repens Polygala lutea Polygonum convolvulus Polypodium glycyrrhiza Polypodium hesperium Polypremum procumbens Polyscias fruticosa Polysiphonia japonica Polystichum acrostichoides Polytrichum commune Porella navicularis Porella pinnata Porphyra yezoensis Porphyridium cruentum Porphyridium purpureum Portulaca amilis Portulaca cryptopetala Portulaca grandiflora Portulaca mauii Portulaca molokaiensis Portulaca oleracea Portulaca pilosa Portulaca suffruticosa Portulaca umbraticola Posidonia australis Prasinococcus capsulatus Prasinoderma coloniale Prasiola crispa Prionitis divaricata Prorocentrum micans Proteomonas sulcata Prototheca wickerhamii Prumnopitys andina Prunella vulgaris Prunus prostrata Prymnesium parvum Pseudolarix amabilis Pseudolycopodiella caroliniana Pseudoscourfieldia marina Pseudotaxiphyllum elegans Pseudotaxus chienii Pseudotsuga menziesii Psilotum nudum Psychotria douarrei Psychotria ipecacuanha Psychotria marginata Pteris ensigormis Pteris vittata Pteromonas angulosa Pteromonas sp Ptilidium pulcherrimum Punctaria latifolia Punica granatum Pycnanthemum tenuifolium Pycnococcus provasolii Pyramimonas parkeae Pyrenacantha malvifolia Quassia amara Quercus shumardii Quillaja saponaria Racomitrium varium Radula lindenbergia Rauvolfia tetraphyla Rehmannia glutinosa Reseda odorata Retrophyllum minus Rhamnus caroliniana Rhamnus japonica Rhizophora mangle Rhodella violacea Rhodiola rosea Rhodochaete parvula Rhododendron scopulorum Rhodomonas sp Rhodophiala pratensis Rhynchostegium serrulatum Ribes aff. giraldii Ricinus communis Roridula gorgonias Rosa palustris Rosmarinus officinalis Roya obtusa Ruellia brittoniana Ruscus sp Sabal bermudana Sagittaria latifolia Saintpaulia ionantha Salix acutifolia Salix dasyclados Salix eriocephala Salix fargesii Salix purpurea Salix sachalinensis Salix viminalis Salvadora sp Salvia spp Sambucus canadensis Sanchezia sp Sanguinaria canadensis Sanguisorba minor Sansevieria trifasciata Santalum acuminatum Saponaria officianalis Sarcandra glabra Sarcobatus vermiculatus Sarcodes sanguinea Sargassum hemiphyllum Sargassum henslowianum Sargassum horneri Sargassum integerrimum Sargassum muticum Sargassum thunbergii Sargassum vachellianum Saruma henryi Sassafras albidum Saururus cernuus Saxegothaea conspicua Saxifraga stolonifera Scaevola sp Scapania nemorosa Scenedesmus dimorphus Sceptridium dissectum Scherffelia dubia Schiedea membranacea Schistochila sp Schizolaena sp Schlegelia parasitica Schlegelia parasitica B Schlegelia violacea Schwetschkeopsis fabronia Sciadopitys verticillata Scouleria aquatica Scourfieldia sp Scutellaria montana Scytosihon lomentaria Scytosiphon dotyo Selaginella apoda Selaginella lepidophylla Selaginella selaginoides Selaginella wallacei Selaginella willdenowii Senecio rowleyanus Senna hebecarpa Sequoia sempervirens Sequoiadendron giganteum Serenoa repens Sessuvium portulacastrum Sessuvium ventricosum Sideroxylon reclinatum Silene latifolia Silybum marianum Simmondsia chinensis Sinapis alba Sinningia tuberosa Sinojackia xylocarpa Sinotubimorpha guangdongensis Sisyrinchium angustifolium Smilax bona nox Solanum dulcamara Solanum lasiophyllum Solanum ptychanthum Solanum sisymbriifolium Solanum xanthocarpum Solenostemon scutellarioides Solidago canadensis Sorbus koehneana Souroubea exauriculata Spergularia media Spermatozopsis exsultans Spermatozopsis similis Sphaerocarpos texanus Sphagnum lescurii Sphagnum palustre Sphagnum recurvatum Spirogyra sp Spirotaenia minuta Spirotaenia sp Stachyurus praecox Stackhousia spathulata Stangeria eriopus Staphylea trifolia Staurastrum sebaldi Staurodesmus convergens Staurodesmus omearii Stemona tuberosa Stephanosphaera pluvialis Stichococcus bacillaris Stigeoclonium helveticum Strelitzia reginae dataset Dataset DataFile 2016 ftdatacite https://doi.org/10.5061/dryad.rb7h0/3 https://doi.org/10.5061/dryad.rb7h0 2021-11-05T12:55:41Z The Scaffolds.zip file is a compressed zip file containing a directory with the scaffolds corresponding to the microsatellite loci. The Scaffolds directory contains the sequence of the scaffolds that had microsatellites identified on them. The files are bz2 compressed zip files. The unzipped file is a fasta file with all of the scaffolds corresponding to the loci in the LocusInfo directory. Dataset Dryas octopetala DataCite Metadata Store (German National Library of Science and Technology) Fissa ENVELOPE(9.951,9.951,63.557,63.557) Fontana ENVELOPE(-60.586,-60.586,-62.996,-62.996) Larrea ENVELOPE(-62.000,-62.000,-62.833,-62.833) Malus ENVELOPE(-65.734,-65.734,-66.229,-66.229) Nivea ENVELOPE(-45.479,-45.479,-60.580,-60.580) Nypa ENVELOPE(8.113,8.113,62.967,62.967) Rhamnus ENVELOPE(-66.828,-66.828,-68.182,-68.182) Ribes ENVELOPE(-60.633,-60.633,-62.650,-62.650) Rugosa ENVELOPE(-61.250,-61.250,-62.633,-62.633) |