MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4)
This ZIP file contains the FASTQ files of the paired-end reads (R1: reads 1; R2: reads 2) produced for each individual in duplicate or triplicate using the MiSeq platform (Run 1). The 823 multiplexed PCR products were indexed using both forward and reverse indices. The list of the 355 multiplexed sa...
| Main Authors: | , , , , , , , , , , , , |
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| Format: | Dataset |
| Language: | unknown |
| Published: |
Dryad Digital Repository
2016
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| Subjects: | |
| Online Access: | https://dx.doi.org/10.5061/dryad.m3p7d/2 http://datadryad.org/resource/doi:10.5061/dryad.m3p7d/2 |
| _version_ | 1821692098434301952 |
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| author | Galan, Maxime Razzauti, Maria Bard, Emilie Bernard, Maria Brouat, Carine Charbonnel, Nathalie Dehne-Garcia, Alexandre Loiseau, Anne Tatard, Caroline Tamisier, Lucie Vayssier-Taussat, Muriel Vignes, Hélène Cosson, Jean-François |
| author_facet | Galan, Maxime Razzauti, Maria Bard, Emilie Bernard, Maria Brouat, Carine Charbonnel, Nathalie Dehne-Garcia, Alexandre Loiseau, Anne Tatard, Caroline Tamisier, Lucie Vayssier-Taussat, Muriel Vignes, Hélène Cosson, Jean-François |
| author_sort | Galan, Maxime |
| collection | DataCite |
| description | This ZIP file contains the FASTQ files of the paired-end reads (R1: reads 1; R2: reads 2) produced for each individual in duplicate or triplicate using the MiSeq platform (Run 1). The 823 multiplexed PCR products were indexed using both forward and reverse indices. The list of the 355 multiplexed samples and the 21 positive and negative controls are provided in the following XLSX file titled: Information concerning the samples multiplexed in the MiSeq Run 1 & 2. |
| format | Dataset |
| genre | Rattus rattus |
| genre_facet | Rattus rattus |
| id | ftdatacite:10.5061/dryad.m3p7d/2 |
| institution | Open Polar |
| language | unknown |
| op_collection_id | ftdatacite |
| op_doi | https://doi.org/10.5061/dryad.m3p7d/2 https://doi.org/10.5061/dryad.m3p7d |
| op_relation | https://dx.doi.org/10.5061/dryad.m3p7d |
| op_rights | http://creativecommons.org/publicdomain/zero/1.0 |
| op_rightsnorm | CC0 |
| publishDate | 2016 |
| publisher | Dryad Digital Repository |
| record_format | openpolar |
| spelling | ftdatacite:10.5061/dryad.m3p7d/2 2025-01-17T00:27:16+00:00 MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) Galan, Maxime Razzauti, Maria Bard, Emilie Bernard, Maria Brouat, Carine Charbonnel, Nathalie Dehne-Garcia, Alexandre Loiseau, Anne Tatard, Caroline Tamisier, Lucie Vayssier-Taussat, Muriel Vignes, Hélène Cosson, Jean-François 2016 https://dx.doi.org/10.5061/dryad.m3p7d/2 http://datadryad.org/resource/doi:10.5061/dryad.m3p7d/2 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.m3p7d http://creativecommons.org/publicdomain/zero/1.0 CC0 Zoonoses Rodents West Africa metagenomics 16S rRNA amplicon sequencing MiSeq Next-generation sequencing NGS High-throughput sequencing HTS Metabarcoding Epidemiology Disease monitoring Senegal Mus musculus domesticus Rattus rattus Mastomys natalensis Mastomys erythroleucus Borrelia Bartonella Mycoplasma Ehrlichia Rickettsia Streptobacillus Orientia dataset Dataset DataFile 2016 ftdatacite https://doi.org/10.5061/dryad.m3p7d/2 https://doi.org/10.5061/dryad.m3p7d 2021-11-05T12:55:41Z This ZIP file contains the FASTQ files of the paired-end reads (R1: reads 1; R2: reads 2) produced for each individual in duplicate or triplicate using the MiSeq platform (Run 1). The 823 multiplexed PCR products were indexed using both forward and reverse indices. The list of the 355 multiplexed samples and the 21 positive and negative controls are provided in the following XLSX file titled: Information concerning the samples multiplexed in the MiSeq Run 1 & 2. Dataset Rattus rattus DataCite |
| spellingShingle | Zoonoses Rodents West Africa metagenomics 16S rRNA amplicon sequencing MiSeq Next-generation sequencing NGS High-throughput sequencing HTS Metabarcoding Epidemiology Disease monitoring Senegal Mus musculus domesticus Rattus rattus Mastomys natalensis Mastomys erythroleucus Borrelia Bartonella Mycoplasma Ehrlichia Rickettsia Streptobacillus Orientia Galan, Maxime Razzauti, Maria Bard, Emilie Bernard, Maria Brouat, Carine Charbonnel, Nathalie Dehne-Garcia, Alexandre Loiseau, Anne Tatard, Caroline Tamisier, Lucie Vayssier-Taussat, Muriel Vignes, Hélène Cosson, Jean-François MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) |
| title | MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) |
| title_full | MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) |
| title_fullStr | MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) |
| title_full_unstemmed | MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) |
| title_short | MiSeq raw sequences (Run 1) of the V4 region 16S rRNA gene from the spleens of 355 murinae from Senegal and 21 positive and negative controls (part 1 to 4) |
| title_sort | miseq raw sequences (run 1) of the v4 region 16s rrna gene from the spleens of 355 murinae from senegal and 21 positive and negative controls (part 1 to 4) |
| topic | Zoonoses Rodents West Africa metagenomics 16S rRNA amplicon sequencing MiSeq Next-generation sequencing NGS High-throughput sequencing HTS Metabarcoding Epidemiology Disease monitoring Senegal Mus musculus domesticus Rattus rattus Mastomys natalensis Mastomys erythroleucus Borrelia Bartonella Mycoplasma Ehrlichia Rickettsia Streptobacillus Orientia |
| topic_facet | Zoonoses Rodents West Africa metagenomics 16S rRNA amplicon sequencing MiSeq Next-generation sequencing NGS High-throughput sequencing HTS Metabarcoding Epidemiology Disease monitoring Senegal Mus musculus domesticus Rattus rattus Mastomys natalensis Mastomys erythroleucus Borrelia Bartonella Mycoplasma Ehrlichia Rickettsia Streptobacillus Orientia |
| url | https://dx.doi.org/10.5061/dryad.m3p7d/2 http://datadryad.org/resource/doi:10.5061/dryad.m3p7d/2 |