Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ...
The Antarctic silverfish (Pleuragramma antarctica) is a critically important forage species with a circumpolar distribution and is unique among other notothenioid species for its wholly pelagic life cycle. Previous studies have provided mixed evidence of population structure over regional and circum...
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Format: | Dataset |
Language: | English |
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Dryad
2020
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Online Access: | https://dx.doi.org/10.5061/dryad.m0cfxpp0z https://datadryad.org/stash/dataset/doi:10.5061/dryad.m0cfxpp0z |
id |
ftdatacite:10.5061/dryad.m0cfxpp0z |
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record_format |
openpolar |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
molecular ecology EST-linked microsatellites Antarctic fish Pleuragramma antarctica population genetic structure |
spellingShingle |
molecular ecology EST-linked microsatellites Antarctic fish Pleuragramma antarctica population genetic structure Caccavo, Jilda Alicia Papetti, Chiara Wetjen, Maj Knust, Rainer Ashford, Julian R. Zane, Lorenzo Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... |
topic_facet |
molecular ecology EST-linked microsatellites Antarctic fish Pleuragramma antarctica population genetic structure |
description |
The Antarctic silverfish (Pleuragramma antarctica) is a critically important forage species with a circumpolar distribution and is unique among other notothenioid species for its wholly pelagic life cycle. Previous studies have provided mixed evidence of population structure over regional and circumpolar scales. The aim of the present study was to test the recent population hypothesis for Antarctic silverfish, which emphasizes the interplay between life history and hydrography in shaping connectivity. A total of 1067 individuals were collected over 25 years from different locations on a circumpolar scale. Samples were genotyped at fifteen microsatellites to assess population differentiation and genetic structuring using clustering methods, F-statistics, and hierarchical analysis of variance. A lack of differentiation was found between locations connected by the Antarctic Slope Front Current (ASF), indicative of high levels of gene flow. However, gene flow was significantly reduced at the South Orkney Islands ... : A total of 1067 Pleuragramma antarctica individuals from 19 sampling locations collected by multiple institutions between 1989 and 2014 were included in the analysis. Of these, 249 individuals collected between 1989 and 1997 from the Ross Sea (RS96, RS97), Halley Bay (HB89, HB91), and South Shetland Islands (SSI96) were included from a previous study on population structure using mitochondrial DNA (Zane et al. 2006). A further 562 individuals collected between 2001 and 2012 from Larsen Bay (LB07), Charcot Island (CI10), Marguerite Bay (MB01, MB02, MB10, MB11), and Joinville Island (JI07, JI10, JI12) were included from a previous connectivity study focused on the Antarctic Peninsula (Agostini et al. 2015). The remaining 256 individuals collected in 2011 and 2014 from the South Orkney Islands (SOI11), Larsen Bay (LB11), Filchner Trough (FT14), Atka Bay (AB14), and Halley Bay (HB14) have not previously been examined. All samples, including those obtained in 2011 and 2014 that had not been previously examined, ... |
format |
Dataset |
author |
Caccavo, Jilda Alicia Papetti, Chiara Wetjen, Maj Knust, Rainer Ashford, Julian R. Zane, Lorenzo |
author_facet |
Caccavo, Jilda Alicia Papetti, Chiara Wetjen, Maj Knust, Rainer Ashford, Julian R. Zane, Lorenzo |
author_sort |
Caccavo, Jilda Alicia |
title |
Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... |
title_short |
Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... |
title_full |
Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... |
title_fullStr |
Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... |
title_full_unstemmed |
Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... |
title_sort |
along-shelf connectivity and circumpolar gene flow in antarctic silverfish (pleuragramma antarctica) ... |
publisher |
Dryad |
publishDate |
2020 |
url |
https://dx.doi.org/10.5061/dryad.m0cfxpp0z https://datadryad.org/stash/dataset/doi:10.5061/dryad.m0cfxpp0z |
long_lat |
ENVELOPE(151.789,151.789,60.835,60.835) ENVELOPE(139.017,139.017,-69.367,-69.367) ENVELOPE(-75.250,-75.250,-69.750,-69.750) ENVELOPE(-36.000,-36.000,-77.000,-77.000) ENVELOPE(-55.867,-55.867,-63.250,-63.250) ENVELOPE(-55.667,-55.667,-63.350,-63.350) ENVELOPE(-97.367,-97.367,59.411,59.411) ENVELOPE(141.378,141.378,-66.787,-66.787) ENVELOPE(-68.000,-68.000,-68.500,-68.500) ENVELOPE(-45.500,-45.500,-60.583,-60.583) |
geographic |
Antarctic Antarctic Peninsula Atka Charcot Charcot Island Filchner Trough Joinville Joinville Island Larsen Bay Marguerite Marguerite Bay Ross Sea South Orkney Islands South Shetland Islands The Antarctic |
geographic_facet |
Antarctic Antarctic Peninsula Atka Charcot Charcot Island Filchner Trough Joinville Joinville Island Larsen Bay Marguerite Marguerite Bay Ross Sea South Orkney Islands South Shetland Islands The Antarctic |
genre |
Antarc* Antarctic Antarctic Peninsula Antarctic silverfish Antarctica Charcot Island Joinville Island Ross Sea South Orkney Islands South Shetland Islands |
genre_facet |
Antarc* Antarctic Antarctic Peninsula Antarctic silverfish Antarctica Charcot Island Joinville Island Ross Sea South Orkney Islands South Shetland Islands |
op_relation |
https://www.ccamlrorg/en/organisation/camlr-convention https://www.researchgate.net/profile/Ellen_Kenchington/publication/236538631_The_use_of_random_amplified_polymorphic_DNA_markers_in_genetic_studies_of_the_sea_scallop_Placopecten_magellanicus_Gmelin_1791/links/0c9605399a18065def000000.pdf https://dx.doi.org/10.1038/s41598-018-36030-x https://dx.doi.org/10.1111/1755-0998.12140 https://dx.doi.org/10.1111/jbi.12497 https://dx.doi.org/10.1111/j.1471-8286.2006.01560.x https://www.ccamlrorg/en/organisation/camlr-convention https://dx.doi.org/10.1111/j.1755-0998.2010.02970.x https://www.researchgate.net/profile/Ellen_Kenchington/publication/236538631_The_use_of_random_amplified_polymorphic_DNA_markers_in_genetic_studies_of_the_sea_scallop_Placopecten_magellanicus_Gmelin_1791/links/0c9605399a18065def000000.pdf https://dx.doi.org/10.1111/j.1365-294x.2006.03105.x |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.m0cfxpp0z10.1038/s41598-018-36030-x10.1111/1755-0998.1214010.1111/jbi.1249710.1111/j.1471-8286.2006.01560.x10.1111/j.1755-0998.2010.02970.x10.1111/j.1365-294x.2006.03105.x |
_version_ |
1789959351276929024 |
spelling |
ftdatacite:10.5061/dryad.m0cfxpp0z 2024-02-04T09:55:23+01:00 Along-shelf connectivity and circumpolar gene flow in Antarctic silverfish (Pleuragramma antarctica) ... Caccavo, Jilda Alicia Papetti, Chiara Wetjen, Maj Knust, Rainer Ashford, Julian R. Zane, Lorenzo 2020 https://dx.doi.org/10.5061/dryad.m0cfxpp0z https://datadryad.org/stash/dataset/doi:10.5061/dryad.m0cfxpp0z en eng Dryad https://www.ccamlrorg/en/organisation/camlr-convention https://www.researchgate.net/profile/Ellen_Kenchington/publication/236538631_The_use_of_random_amplified_polymorphic_DNA_markers_in_genetic_studies_of_the_sea_scallop_Placopecten_magellanicus_Gmelin_1791/links/0c9605399a18065def000000.pdf https://dx.doi.org/10.1038/s41598-018-36030-x https://dx.doi.org/10.1111/1755-0998.12140 https://dx.doi.org/10.1111/jbi.12497 https://dx.doi.org/10.1111/j.1471-8286.2006.01560.x https://www.ccamlrorg/en/organisation/camlr-convention https://dx.doi.org/10.1111/j.1755-0998.2010.02970.x https://www.researchgate.net/profile/Ellen_Kenchington/publication/236538631_The_use_of_random_amplified_polymorphic_DNA_markers_in_genetic_studies_of_the_sea_scallop_Placopecten_magellanicus_Gmelin_1791/links/0c9605399a18065def000000.pdf https://dx.doi.org/10.1111/j.1365-294x.2006.03105.x Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 molecular ecology EST-linked microsatellites Antarctic fish Pleuragramma antarctica population genetic structure Dataset dataset 2020 ftdatacite https://doi.org/10.5061/dryad.m0cfxpp0z10.1038/s41598-018-36030-x10.1111/1755-0998.1214010.1111/jbi.1249710.1111/j.1471-8286.2006.01560.x10.1111/j.1755-0998.2010.02970.x10.1111/j.1365-294x.2006.03105.x 2024-01-05T01:14:15Z The Antarctic silverfish (Pleuragramma antarctica) is a critically important forage species with a circumpolar distribution and is unique among other notothenioid species for its wholly pelagic life cycle. Previous studies have provided mixed evidence of population structure over regional and circumpolar scales. The aim of the present study was to test the recent population hypothesis for Antarctic silverfish, which emphasizes the interplay between life history and hydrography in shaping connectivity. A total of 1067 individuals were collected over 25 years from different locations on a circumpolar scale. Samples were genotyped at fifteen microsatellites to assess population differentiation and genetic structuring using clustering methods, F-statistics, and hierarchical analysis of variance. A lack of differentiation was found between locations connected by the Antarctic Slope Front Current (ASF), indicative of high levels of gene flow. However, gene flow was significantly reduced at the South Orkney Islands ... : A total of 1067 Pleuragramma antarctica individuals from 19 sampling locations collected by multiple institutions between 1989 and 2014 were included in the analysis. Of these, 249 individuals collected between 1989 and 1997 from the Ross Sea (RS96, RS97), Halley Bay (HB89, HB91), and South Shetland Islands (SSI96) were included from a previous study on population structure using mitochondrial DNA (Zane et al. 2006). A further 562 individuals collected between 2001 and 2012 from Larsen Bay (LB07), Charcot Island (CI10), Marguerite Bay (MB01, MB02, MB10, MB11), and Joinville Island (JI07, JI10, JI12) were included from a previous connectivity study focused on the Antarctic Peninsula (Agostini et al. 2015). The remaining 256 individuals collected in 2011 and 2014 from the South Orkney Islands (SOI11), Larsen Bay (LB11), Filchner Trough (FT14), Atka Bay (AB14), and Halley Bay (HB14) have not previously been examined. All samples, including those obtained in 2011 and 2014 that had not been previously examined, ... Dataset Antarc* Antarctic Antarctic Peninsula Antarctic silverfish Antarctica Charcot Island Joinville Island Ross Sea South Orkney Islands South Shetland Islands DataCite Metadata Store (German National Library of Science and Technology) Antarctic Antarctic Peninsula Atka ENVELOPE(151.789,151.789,60.835,60.835) Charcot ENVELOPE(139.017,139.017,-69.367,-69.367) Charcot Island ENVELOPE(-75.250,-75.250,-69.750,-69.750) Filchner Trough ENVELOPE(-36.000,-36.000,-77.000,-77.000) Joinville ENVELOPE(-55.867,-55.867,-63.250,-63.250) Joinville Island ENVELOPE(-55.667,-55.667,-63.350,-63.350) Larsen Bay ENVELOPE(-97.367,-97.367,59.411,59.411) Marguerite ENVELOPE(141.378,141.378,-66.787,-66.787) Marguerite Bay ENVELOPE(-68.000,-68.000,-68.500,-68.500) Ross Sea South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) South Shetland Islands The Antarctic |