Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ...
Background: The two North Atlantic eel species, the European and the American eel, represent an ideal system in which to study parallel selection patterns due to their sister species status and the presence of ongoing gene flow. A panel of 80 coding-gene SNPs previously analyzed in American eel was...
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Online Access: | https://dx.doi.org/10.5061/dryad.jn800 https://datadryad.org/stash/dataset/doi:10.5061/dryad.jn800 |
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ftdatacite:10.5061/dryad.jn800 2024-02-04T10:00:13+01:00 Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... Ulrik, Malene G. Pujolar, José Martín Ferchaud, Anne-Laure Jacobsen, Magnus W. Als, Thomas D. Gagnaire, Pierre Alexandre Frydenberg, Jane Bøcher, Peder K. Jónsson, Bjarni Bernatchez, Louis Hansen, Michael M. 2014 https://dx.doi.org/10.5061/dryad.jn800 https://datadryad.org/stash/dataset/doi:10.5061/dryad.jn800 en eng Dryad https://dx.doi.org/10.1186/1471-2148-14-138 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 genetic-by-environment associations American Eel parallel selection Single nucleotide polymorphisms European eel Dataset dataset 2014 ftdatacite https://doi.org/10.5061/dryad.jn80010.1186/1471-2148-14-138 2024-01-05T04:51:50Z Background: The two North Atlantic eel species, the European and the American eel, represent an ideal system in which to study parallel selection patterns due to their sister species status and the presence of ongoing gene flow. A panel of 80 coding-gene SNPs previously analyzed in American eel was used to genotype European eel individuals (glass eels) from 8 sampling locations across the species distribution. We tested for single-generation signatures of spatially varying selection in European eel by searching for elevated genetic differentiation using FST-based outlier tests and by testing for significant associations between allele frequencies and environmental variables. Results: We found signatures of possible selection at a total of 11 coding-gene SNPs. Candidate genes for local selection constituted mainly genes with a major role in metabolism as well as defense genes. Contrary to what has been found for American eel, only 2 SNPs in our study correlated with differences in temperature, which suggests ... : SNP dataExcel file detailing all SNP genotyped at all (glass eel) individualsData_Dryad_BMCEvolBiol.xlsx ... Dataset European eel North Atlantic DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
genetic-by-environment associations American Eel parallel selection Single nucleotide polymorphisms European eel |
spellingShingle |
genetic-by-environment associations American Eel parallel selection Single nucleotide polymorphisms European eel Ulrik, Malene G. Pujolar, José Martín Ferchaud, Anne-Laure Jacobsen, Magnus W. Als, Thomas D. Gagnaire, Pierre Alexandre Frydenberg, Jane Bøcher, Peder K. Jónsson, Bjarni Bernatchez, Louis Hansen, Michael M. Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... |
topic_facet |
genetic-by-environment associations American Eel parallel selection Single nucleotide polymorphisms European eel |
description |
Background: The two North Atlantic eel species, the European and the American eel, represent an ideal system in which to study parallel selection patterns due to their sister species status and the presence of ongoing gene flow. A panel of 80 coding-gene SNPs previously analyzed in American eel was used to genotype European eel individuals (glass eels) from 8 sampling locations across the species distribution. We tested for single-generation signatures of spatially varying selection in European eel by searching for elevated genetic differentiation using FST-based outlier tests and by testing for significant associations between allele frequencies and environmental variables. Results: We found signatures of possible selection at a total of 11 coding-gene SNPs. Candidate genes for local selection constituted mainly genes with a major role in metabolism as well as defense genes. Contrary to what has been found for American eel, only 2 SNPs in our study correlated with differences in temperature, which suggests ... : SNP dataExcel file detailing all SNP genotyped at all (glass eel) individualsData_Dryad_BMCEvolBiol.xlsx ... |
format |
Dataset |
author |
Ulrik, Malene G. Pujolar, José Martín Ferchaud, Anne-Laure Jacobsen, Magnus W. Als, Thomas D. Gagnaire, Pierre Alexandre Frydenberg, Jane Bøcher, Peder K. Jónsson, Bjarni Bernatchez, Louis Hansen, Michael M. |
author_facet |
Ulrik, Malene G. Pujolar, José Martín Ferchaud, Anne-Laure Jacobsen, Magnus W. Als, Thomas D. Gagnaire, Pierre Alexandre Frydenberg, Jane Bøcher, Peder K. Jónsson, Bjarni Bernatchez, Louis Hansen, Michael M. |
author_sort |
Ulrik, Malene G. |
title |
Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... |
title_short |
Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... |
title_full |
Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... |
title_fullStr |
Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... |
title_full_unstemmed |
Data from: Do North Atlantic Eels show parallel patterns of spatially varying selection? ... |
title_sort |
data from: do north atlantic eels show parallel patterns of spatially varying selection? ... |
publisher |
Dryad |
publishDate |
2014 |
url |
https://dx.doi.org/10.5061/dryad.jn800 https://datadryad.org/stash/dataset/doi:10.5061/dryad.jn800 |
genre |
European eel North Atlantic |
genre_facet |
European eel North Atlantic |
op_relation |
https://dx.doi.org/10.1186/1471-2148-14-138 |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.jn80010.1186/1471-2148-14-138 |
_version_ |
1789965411217833984 |