Comparing_stable_isotope&genetic_similarity_files

• Main Authors: Carroll, E. L., Baker, C. S., Watson, M., Alderman, R., Bannister, J., Gaggiotti, O. E., Gröcke, D. R., Patenaude, N., Harcourt, R.
• Format: Dataset
• Language: unknown
• Published: Dryad Digital Repository 2015
• Subjects: migratory culture; population structure; migratory fidelity; stable isotope; conservation; southern right whale; Indo-Pacific; New Zealand; Australia; South Pacific; Eubalaena australis; Pacific; Lynch; Southern Right Whale
• Online Access: https://dx.doi.org/10.5061/dryad.cc2kq/2; http://datadryad.org/resource/doi:10.5061/dryad.cc2kq/2

Dryad Archive for SREP16182: SI_SRW_data.zip. This zip file contains: 1 - Files of estimates of pairwise relatedness generated from microsatellite loci in SREP16182_SRWdata_Archive in the program COANCESTRY, using the kinship estimators of Lynch & Ritland 1999 (Lynch&Ritland_relatedness.txt) and Ritland 1996 (Ritland_relatedness.txt). 2 – Files of sample stable isotope values for both d13C (Sample_dC.txt) and d15N (Sample_dN.txt), as well as pairwise similarities of d13C calculated using Euclidean distance in program GENODIVE (dC_euclidean_correct_names.gdv). 3 – A file that includes d13C, d15N, mtDNA, sampling location and sex ID data for the samples used in the GLM work (SI_data_Aus_SRWtxt.txt) 4 – R code for (1) running the comparison of similarities between d13C and microsatellite-based kinship estimators and (2) running GLMs on d13C data, with mtDNA, sex and sampling state as potential explanatory factors. R code is annotated so it can be easily run if the files are placed in the appropriate files and required packages are downloaded.