Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ...
The mechanisms that determine patterns of species dispersal are important factors in the production and maintenance of biodiversity. Understanding these mechanisms helps to forecast the responses of species to environmental change. Here we used a comparative framework and genome-wide data obtained t...
Main Authors: | , , , , , , , , , , , , , , , , , |
---|---|
Format: | Dataset |
Language: | English |
Published: |
Dryad
2018
|
Subjects: | |
Online Access: | https://dx.doi.org/10.5061/dryad.bs30388 https://datadryad.org/stash/dataset/doi:10.5061/dryad.bs30388 |
id |
ftdatacite:10.5061/dryad.bs30388 |
---|---|
record_format |
openpolar |
spelling |
ftdatacite:10.5061/dryad.bs30388 2024-02-04T09:55:22+01:00 Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... Clucas, Gemma V. Younger, Jane L. Kao, Damian Emmerson, Louise Southwell, Colin Wienecke, Barbara Rogers, Alex D. Bost, Charles-Andre Miller, Gary D. Polito, Michael J. Lelliot, Patrick Handley, Jonathan Crofts, Sarah Phillips, Richard A. Dunn, Michael J. Miller, Karen J. Hart, Tom Lelliott, Patrick 2018 https://dx.doi.org/10.5061/dryad.bs30388 https://datadryad.org/stash/dataset/doi:10.5061/dryad.bs30388 en eng Dryad https://dx.doi.org/10.1111/mec.14896 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 Aptenodytes forsteri Aptenodytes Polar Front Pygoscelis papua Aptenodytes patagonicus Pygoscelis Pygoscelis antarctica Pygoscelis adeliae Dataset dataset 2018 ftdatacite https://doi.org/10.5061/dryad.bs3038810.1111/mec.14896 2024-01-05T04:39:59Z The mechanisms that determine patterns of species dispersal are important factors in the production and maintenance of biodiversity. Understanding these mechanisms helps to forecast the responses of species to environmental change. Here we used a comparative framework and genome-wide data obtained through RAD-seq to compare the patterns of connectivity among breeding colonies for five penguin species with shared ancestry, overlapping distributions, and differing ecological niches, allowing an examination of the intrinsic and extrinsic barriers governing dispersal patterns. Our findings show that at-sea range and oceanography underlie patterns of dispersal in these penguins. The pelagic niche of emperor (Aptenodytes forsteri), king (A. patagonicus), Adélie (Pygoscelis adeliae) and chinstrap (P. antarctica) penguins facilitates gene flow over thousands of kilometres. In contrast, the coastal niche of gentoo penguins (P. papua) limits dispersal, resulting in population divergences. Oceanographic fronts also act ... : Adelie penguins - VCF of SNP datasetAdelie.vcfChinstrap penguins - VCF of SNP datasetChinstrap.vcfGentoo penguins - VCF of full SNP datasetincludes outlier lociGentoos_all-SNPs.vcfGentoo penguins - VCF of neutral SNP datasetoutlier loci removedGentoos_neutral-SNPs.vcfGentoo penguins - nexus file for BFD*Input file of SNPs for BFD* species delimitationGentoos_input_for_BFD.nexGentoo penguins - phylip file for RAxMLPhylip alignment of SNPs for phylogenetic inference in RAxMLGentoos_input_for_RAxML.phyGentoos_input_for_SNAPP_set1XML input file for SNAPP analysis of gentoo penguins - set 1Gentoos_input_for_SNAPP_set2XML input file for SNAPP analysis - set 2 ... Dataset Antarc* Antarctica Aptenodytes forsteri Pygoscelis adeliae Pygoscelis antarctica Pygoscelis papua Southern Ocean DataCite Metadata Store (German National Library of Science and Technology) Southern Ocean |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Aptenodytes forsteri Aptenodytes Polar Front Pygoscelis papua Aptenodytes patagonicus Pygoscelis Pygoscelis antarctica Pygoscelis adeliae |
spellingShingle |
Aptenodytes forsteri Aptenodytes Polar Front Pygoscelis papua Aptenodytes patagonicus Pygoscelis Pygoscelis antarctica Pygoscelis adeliae Clucas, Gemma V. Younger, Jane L. Kao, Damian Emmerson, Louise Southwell, Colin Wienecke, Barbara Rogers, Alex D. Bost, Charles-Andre Miller, Gary D. Polito, Michael J. Lelliot, Patrick Handley, Jonathan Crofts, Sarah Phillips, Richard A. Dunn, Michael J. Miller, Karen J. Hart, Tom Lelliott, Patrick Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... |
topic_facet |
Aptenodytes forsteri Aptenodytes Polar Front Pygoscelis papua Aptenodytes patagonicus Pygoscelis Pygoscelis antarctica Pygoscelis adeliae |
description |
The mechanisms that determine patterns of species dispersal are important factors in the production and maintenance of biodiversity. Understanding these mechanisms helps to forecast the responses of species to environmental change. Here we used a comparative framework and genome-wide data obtained through RAD-seq to compare the patterns of connectivity among breeding colonies for five penguin species with shared ancestry, overlapping distributions, and differing ecological niches, allowing an examination of the intrinsic and extrinsic barriers governing dispersal patterns. Our findings show that at-sea range and oceanography underlie patterns of dispersal in these penguins. The pelagic niche of emperor (Aptenodytes forsteri), king (A. patagonicus), Adélie (Pygoscelis adeliae) and chinstrap (P. antarctica) penguins facilitates gene flow over thousands of kilometres. In contrast, the coastal niche of gentoo penguins (P. papua) limits dispersal, resulting in population divergences. Oceanographic fronts also act ... : Adelie penguins - VCF of SNP datasetAdelie.vcfChinstrap penguins - VCF of SNP datasetChinstrap.vcfGentoo penguins - VCF of full SNP datasetincludes outlier lociGentoos_all-SNPs.vcfGentoo penguins - VCF of neutral SNP datasetoutlier loci removedGentoos_neutral-SNPs.vcfGentoo penguins - nexus file for BFD*Input file of SNPs for BFD* species delimitationGentoos_input_for_BFD.nexGentoo penguins - phylip file for RAxMLPhylip alignment of SNPs for phylogenetic inference in RAxMLGentoos_input_for_RAxML.phyGentoos_input_for_SNAPP_set1XML input file for SNAPP analysis of gentoo penguins - set 1Gentoos_input_for_SNAPP_set2XML input file for SNAPP analysis - set 2 ... |
format |
Dataset |
author |
Clucas, Gemma V. Younger, Jane L. Kao, Damian Emmerson, Louise Southwell, Colin Wienecke, Barbara Rogers, Alex D. Bost, Charles-Andre Miller, Gary D. Polito, Michael J. Lelliot, Patrick Handley, Jonathan Crofts, Sarah Phillips, Richard A. Dunn, Michael J. Miller, Karen J. Hart, Tom Lelliott, Patrick |
author_facet |
Clucas, Gemma V. Younger, Jane L. Kao, Damian Emmerson, Louise Southwell, Colin Wienecke, Barbara Rogers, Alex D. Bost, Charles-Andre Miller, Gary D. Polito, Michael J. Lelliot, Patrick Handley, Jonathan Crofts, Sarah Phillips, Richard A. Dunn, Michael J. Miller, Karen J. Hart, Tom Lelliott, Patrick |
author_sort |
Clucas, Gemma V. |
title |
Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... |
title_short |
Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... |
title_full |
Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... |
title_fullStr |
Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... |
title_full_unstemmed |
Data from: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins ... |
title_sort |
data from: comparative population genomics reveals key barriers to dispersal in southern ocean penguins ... |
publisher |
Dryad |
publishDate |
2018 |
url |
https://dx.doi.org/10.5061/dryad.bs30388 https://datadryad.org/stash/dataset/doi:10.5061/dryad.bs30388 |
geographic |
Southern Ocean |
geographic_facet |
Southern Ocean |
genre |
Antarc* Antarctica Aptenodytes forsteri Pygoscelis adeliae Pygoscelis antarctica Pygoscelis papua Southern Ocean |
genre_facet |
Antarc* Antarctica Aptenodytes forsteri Pygoscelis adeliae Pygoscelis antarctica Pygoscelis papua Southern Ocean |
op_relation |
https://dx.doi.org/10.1111/mec.14896 |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.bs3038810.1111/mec.14896 |
_version_ |
1789959317207646208 |