Processing of Illumina reads with script: deMultiplex_V7

This script compare each sequence first n letters to barcode list and assign them to different species, add SpNum/MID number to each sequence, and output statistics of barcode, including errors.

Bibliographic Details
Main Authors: Knowles, L. Lacey, Massatti, Rob, He, Qixin, Olson, Link E., Lanier, Hayley C.
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2017
Subjects:
Alaska
climate change
isolation by distance
mammal
next generation sequencing
phylogeography
Procrustes analyses
RADseq
Pleistocene
Holocene
Ochotona collaris
Marmota caligata
Microtus miurus
Lemmus trimucronatus
Spermophilus parryi
Online Access:https://dx.doi.org/10.5061/dryad.8jm51/6
http://datadryad.org/resource/doi:10.5061/dryad.8jm51/6
id ftdatacite:10.5061/dryad.8jm51/6
record_format openpolar
spelling ftdatacite:10.5061/dryad.8jm51/6 2023-05-15T17:07:28+02:00 Processing of Illumina reads with script: deMultiplex_V7 Knowles, L. Lacey Massatti, Rob He, Qixin Olson, Link E. Lanier, Hayley C. 2017 https://dx.doi.org/10.5061/dryad.8jm51/6 http://datadryad.org/resource/doi:10.5061/dryad.8jm51/6 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.8jm51 http://creativecommons.org/publicdomain/zero/1.0 CC0 Alaska climate change isolation by distance mammal next generation sequencing phylogeography Procrustes analyses RADseq Pleistocene Holocene Ochotona collaris Marmota caligata Microtus miurus Lemmus trimucronatus Spermophilus parryi dataset Dataset DataFile 2017 ftdatacite https://doi.org/10.5061/dryad.8jm51/6 https://doi.org/10.5061/dryad.8jm51 2021-11-05T12:55:41Z This script compare each sequence first n letters to barcode list and assign them to different species, add SpNum/MID number to each sequence, and output statistics of barcode, including errors. Dataset Lemmus trimucronatus Alaska DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Alaska
climate change
isolation by distance
mammal
next generation sequencing
phylogeography
Procrustes analyses
RADseq
Pleistocene
Holocene
Ochotona collaris
Marmota caligata
Microtus miurus
Lemmus trimucronatus
Spermophilus parryi
spellingShingle Alaska
climate change
isolation by distance
mammal
next generation sequencing
phylogeography
Procrustes analyses
RADseq
Pleistocene
Holocene
Ochotona collaris
Marmota caligata
Microtus miurus
Lemmus trimucronatus
Spermophilus parryi
Knowles, L. Lacey
Massatti, Rob
He, Qixin
Olson, Link E.
Lanier, Hayley C.
Processing of Illumina reads with script: deMultiplex_V7
topic_facet Alaska
climate change
isolation by distance
mammal
next generation sequencing
phylogeography
Procrustes analyses
RADseq
Pleistocene
Holocene
Ochotona collaris
Marmota caligata
Microtus miurus
Lemmus trimucronatus
Spermophilus parryi
description This script compare each sequence first n letters to barcode list and assign them to different species, add SpNum/MID number to each sequence, and output statistics of barcode, including errors.
format Dataset
author Knowles, L. Lacey
Massatti, Rob
He, Qixin
Olson, Link E.
Lanier, Hayley C.
author_facet Knowles, L. Lacey
Massatti, Rob
He, Qixin
Olson, Link E.
Lanier, Hayley C.
author_sort Knowles, L. Lacey
title Processing of Illumina reads with script: deMultiplex_V7
title_short Processing of Illumina reads with script: deMultiplex_V7
title_full Processing of Illumina reads with script: deMultiplex_V7
title_fullStr Processing of Illumina reads with script: deMultiplex_V7
title_full_unstemmed Processing of Illumina reads with script: deMultiplex_V7
title_sort processing of illumina reads with script: demultiplex_v7
publisher Dryad Digital Repository
publishDate 2017
url https://dx.doi.org/10.5061/dryad.8jm51/6
http://datadryad.org/resource/doi:10.5061/dryad.8jm51/6
genre Lemmus trimucronatus
Alaska
genre_facet Lemmus trimucronatus
Alaska
op_relation https://dx.doi.org/10.5061/dryad.8jm51
op_rights http://creativecommons.org/publicdomain/zero/1.0
op_rightsnorm CC0
op_doi https://doi.org/10.5061/dryad.8jm51/6
https://doi.org/10.5061/dryad.8jm51
_version_ 1766062898589728768

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