Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ...
Studies of the oceanic and near-shore distributions of Pacific salmon, whose migrations typically span thousands of kilometers, have become increasingly valuable in the presence of climate change, increasing hatchery production, and potentially high rates of bycatch in offshore fisheries. Genetics d...
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ftdatacite:10.5061/dryad.8849 2024-02-04T10:05:14+01:00 Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... Seeb, Lisa W Templin, William D Sato, Shunpei Abe, Syuiti Warheit, Kenneth Park, Jung Youn Seeb, James E 2011 https://dx.doi.org/10.5061/dryad.8849 https://datadryad.org/stash/dataset/doi:10.5061/dryad.8849 en eng Dryad https://dx.doi.org/10.1111/j.1755-0998.2010.02966.x Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 Oncorhynchus keta Dataset dataset 2011 ftdatacite https://doi.org/10.5061/dryad.884910.1111/j.1755-0998.2010.02966.x 2024-01-05T01:14:15Z Studies of the oceanic and near-shore distributions of Pacific salmon, whose migrations typically span thousands of kilometers, have become increasingly valuable in the presence of climate change, increasing hatchery production, and potentially high rates of bycatch in offshore fisheries. Genetics data offer considerable insights into both the migratory routes as well as the evolutionary histories of the species. However, these types of studies require extensive datasets from spawning populations originating from across the species? range. Single nucleotide polymorphisms (SNPs) have been particularly amenable for multi-national applications because they are easily shared, require little inter-laboratory standardization, and can be assayed through increasingly efficient technologies. Here we discuss the development of a dataset for 114 populations of chum salmon through a collaboration among North American and Asian researchers, termed PacSNP. PacSNP is focused on developing the database and applying it to ... : PacSNP chum data for MERThe file is formatted for GenAlEx software, but can easily be converted to Genepop or similar formats. Genotypes are in two-column format with missing data designated with a “0”. Population code and locus code worksheets follow the rawdata. The population order differs between the rawdata which is in numeric order and Table 1 of the manuscript which is ordered geographically. This is particularly noticeable in the order of the Western Alaska populations including the Yukon River. The rawdata includes laboratory names for the SNPs; a key to published names is in the locus code worksheet. The mtDNA SNPs are listed independently and have not been combined into composite haplotypes. ... Dataset Yukon river Alaska Yukon DataCite Metadata Store (German National Library of Science and Technology) Keta ENVELOPE(-19.455,-19.455,65.656,65.656) Pacific Yukon |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Oncorhynchus keta |
spellingShingle |
Oncorhynchus keta Seeb, Lisa W Templin, William D Sato, Shunpei Abe, Syuiti Warheit, Kenneth Park, Jung Youn Seeb, James E Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... |
topic_facet |
Oncorhynchus keta |
description |
Studies of the oceanic and near-shore distributions of Pacific salmon, whose migrations typically span thousands of kilometers, have become increasingly valuable in the presence of climate change, increasing hatchery production, and potentially high rates of bycatch in offshore fisheries. Genetics data offer considerable insights into both the migratory routes as well as the evolutionary histories of the species. However, these types of studies require extensive datasets from spawning populations originating from across the species? range. Single nucleotide polymorphisms (SNPs) have been particularly amenable for multi-national applications because they are easily shared, require little inter-laboratory standardization, and can be assayed through increasingly efficient technologies. Here we discuss the development of a dataset for 114 populations of chum salmon through a collaboration among North American and Asian researchers, termed PacSNP. PacSNP is focused on developing the database and applying it to ... : PacSNP chum data for MERThe file is formatted for GenAlEx software, but can easily be converted to Genepop or similar formats. Genotypes are in two-column format with missing data designated with a “0”. Population code and locus code worksheets follow the rawdata. The population order differs between the rawdata which is in numeric order and Table 1 of the manuscript which is ordered geographically. This is particularly noticeable in the order of the Western Alaska populations including the Yukon River. The rawdata includes laboratory names for the SNPs; a key to published names is in the locus code worksheet. The mtDNA SNPs are listed independently and have not been combined into composite haplotypes. ... |
format |
Dataset |
author |
Seeb, Lisa W Templin, William D Sato, Shunpei Abe, Syuiti Warheit, Kenneth Park, Jung Youn Seeb, James E |
author_facet |
Seeb, Lisa W Templin, William D Sato, Shunpei Abe, Syuiti Warheit, Kenneth Park, Jung Youn Seeb, James E |
author_sort |
Seeb, Lisa W |
title |
Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... |
title_short |
Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... |
title_full |
Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... |
title_fullStr |
Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... |
title_full_unstemmed |
Data from: Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon ... |
title_sort |
data from: single nucleotide polymorphisms across a species' range: implications for conservation studies of pacific salmon ... |
publisher |
Dryad |
publishDate |
2011 |
url |
https://dx.doi.org/10.5061/dryad.8849 https://datadryad.org/stash/dataset/doi:10.5061/dryad.8849 |
long_lat |
ENVELOPE(-19.455,-19.455,65.656,65.656) |
geographic |
Keta Pacific Yukon |
geographic_facet |
Keta Pacific Yukon |
genre |
Yukon river Alaska Yukon |
genre_facet |
Yukon river Alaska Yukon |
op_relation |
https://dx.doi.org/10.1111/j.1755-0998.2010.02966.x |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.884910.1111/j.1755-0998.2010.02966.x |
_version_ |
1789974266157989888 |