Data from: Smooth brome invasion increases rare soil bacterial species prevalence and alters soil bacterial community composition

• Main Authors: Piper, Candace L., Siciliano, Steven D., Winsley, Tristrom, Lamb, Eric G.
• Format: Dataset
• Language: English
• Published: Dryad 2015
• Subjects: Chthonomonadetes; Candidatus Phytoplasma; Flexibacteraceae; Nordella; Cyclobacteriaceae; Methylibium petroleiphilum; Sulfobacillaceae; Arthrospira fusiformis; Xanthomonadaceae; FAC88; Thioalkalivibrio; Amycolatopsis australiensis; Armatimonadales; Achillea millefolium; Streptomyces scabrisporus; Micrococcaceae; Artemisia frigida; Chlorobi; Spartobacteriales; Cryptosporangium japonicum; Microscilla marina; Carex filifolia; Rosa arkansana; Haliangiaceae; Rubrobacter taiwanensis; Coxiella; Azospirillum; Prosthecobacter vanneervenii; Chelatococcus; Methylobacterium sp.4-46; Waddlia; Aeromicrobium marinum; Fervidobacterium nodosum; Pulsatilla patens; Dehalococcoidetes; Bromus anomalus; Okibacterium fritillariae; Olsenella; Cirsium flodmanii; Dichelobacter; Sejongia; wb1_P06; Clostridiales; Rhodospirillaceae; Stigmatella; Flavobacteria; Sediment-1; Psychrobacter; Vicia americana var. minor; GAL15; Veillonellaceae; C6; Candidatus Solibacter; Chthoniobacter flavus; Xanthomonadales; Williamsiaceae; Pseudomonadaceae; Rhodobacterales; Methyloversatilis; Rubellimicrobium thermophilum; Desulfobacula; Tatlockia; Geobacter sp.M21; Phycisphaeraceae; Nitrospira sp.; Bdellovibrio; Kineosporiaceae; Geodermatophilus; Rhodoplanes; Dyella; Anaerospora hongkongensis; Actinoplanes; Mycobacteriaceae; Dyellagin sengisoli; Chlorobiales; Chondromyces robustus; Oscillochloris; Hydrogenophilus; Rubellimicrobium; Cryptosporangiaceae; Thermotogae; Chthonomonadales; Microthrixaceae; Streptosporangium longisporum; Brevibacillus; Candidatus Entotheonella; Chondromyces; Methylopila; Blastopirellula marina; Koeleria macrantha; Pascopyrum smithii; Bacillus; Bromus inermis; Dokdonia donghaensis; Enterobacteriales; OPB56; Lactobacillales; Streptophyta; SM1B09; Sva0725; Kitasatospora; Williamsia muralis; Gemmatimonadetes; Magnetococcus; Methylacidiphilales; MJK10; Couchioplanes; Desulfuromonas; SCA1145; Clostridiaceae; Arhodomonas; Bryantella formatexigens; Cellulosimicrobium; Chloroherpeton; Tragopogon dubius; Streptomyces cyaneofuscatus; Mycobacterium chlorophenolicum; Descurainia sophia; Nostocaceae; Neisseriaceae; Flavobacteriales; Facklamia; Legionella; Chloroflexaceae; SCA1170; Helcococcus ovis; Sulfurihydrogenibium; Rhodospirillales; Agrobacterium; Exiguobacterium sibiricum; WS3; Gemmata; Kutzneria; Thermopsis rhombifolia; Geobacillus; Porphyrobacter; WS6; Erythrobacteraceae; Chloroflexus sp.Y-400-fl; Methylocystaceae; CFB-26; Streptosporangium; Dechloromonas; Plantibacter; Hydrogenophilales; Kineococcus radiotolerans; Desulfovibrio senezii; Chromatiales; Blastomonas; Deferribacteraceae; Laceyella sacchari; Coriobacteriales; Armatimonadia; Mycoplana; Acinetobacter rhizosphaerae; Massilia timonae; Roseococcus; Sphingomonadaceae; Dactylosporangium; Actinopolysporaceae; Providencia heimbachae; Aquimarina muelleri; Sphingobacteria; Acetobacteraceae; Salix wolfii; Burkholderiales; Anaerolinea; GN02; Pseudomonas oleovorans; GN08; Emticicia; GN07; Cupriavidus gilardii; Pedomicrobium; Rhodovibrio; Williamsia; Nitrospiraceae; Nitrospirales; SM1D11; Iamiaceae; CCM11b; BPC110; Aquimarina; Desulfomicrobiaceae; Mycobacterium stomatepiae; Candidatus Methylacidiphilum; Thiocystis; Candidatus Solibacterusitatus; Nocardia exalbida; Arthrospira; Gemmatimonadales; Actinoplanes globisporus; Halothermothrix orenii; Exiguobacterium; Bljii12; Anaerospora; Marinomonas; Xanthomonas; Gemmatales; Methylobacteriaceae; Alteromonadaceae; Cupriavidus pinatubonensis; Nautiliaceae; Thermodesulfovibrionaceae; Geobacter metallireducens; Bacilli; OPB80; Labrys; Antennaria parvifolia; Nautiliales; Methylobacterium; Cardiobacteriaceae; Dethiosulfovibrionaceae; Rhizobiales; Desulfuromonadaceae; Labrenzia; Flavobacterium succinicans; Solibacterales; Luteibacter rhizovicinus; Pirellula; Gemmatimonadaceae; Sphingosinicella; Chitinophaga; Microcoleus; Desulfovibrio magneticus; Thermoplasmatales; GN12; Flexibacter flexilis; Salinispora; Bradyrhizobium canariense; Sporolactobacillus kofuensis; Saprospiraceae; Euglenozoa; Rhodovibrio salinarum; Exiguobacterales; Actinoplanes durhamensis; Oxalobacteraceae; Bartonellaceae; Methylibium; CH21; Rhodospirillum; Rhodocyclaceae; Erythrobacter aquimaris; Rhodoferax; LD19; Thermosipho; Plesiocystis; Pantoea citrea; Rhodobiaceae; Helcococcus; Elusimicrobia; Deinococcus papagonensis; Planktothricoides raciborskii; Armatimonadetes; Kaistia; Virgisporangium ochraceum; AKIW874; Virgisporangium; Opitutales; Ignatzschineria; Luteolibacter; Gemmataceae; Chelativorans; Trichodesmium; Rickettsiales; Thermomonas; SR1; Dehalococcoidales; Methylococcales; Cellulomonadaceae; Caloramator; Zhouia amylolytica; Anaeromyxobacter; Lysobacter taiwanensis; Bacillus soli; Desulfomicrobium orale; Erysimum inconspicuum; Streptomyces ahygroscopicus; Yersinia; Leptonema illini; Frankiaceae; Deinococcus; Nannocystis exedens; Aurantimona saltamirensis; Cystobacter fuscus; Nassella viridula; Phormidiaceae; Thermosinus carboxydivorans; Halanaerobiales; ClostridialesFamilyXI.IncertaeSedis; Dyadobacter; Acidimicrobiales; Chlorobiaceae; Burkholderia sordidicola; Bartonella washoensis; Aeromicrobium; Fibrobacteres; Flammeovirgaceae; Methylacidiphilaceae; Deinococcales; Spartobacteriaceae; Mycoplasma; Modestobacter; Dehalococcoides sp.BAV1; Streptomyces tumescens; Paenibacillus sabinae; Providencia; Sphingosinicella microcystinivorans; Alteromonadales; Rubrobacter xylanophilus; Actinoallomurus; Streptomyces cuspidosporus; Rubrobacteraceae; TIBE07; Beijerinckiaceae; Hydrogenophilus halorhabdus; Slackia exigua; ZB2; Anaerolinaceae; Methylobacterium organophilum; MC18; Enterococcus; Mycobacterium; Rhodopseudomonas; Simkaniaceae; Rhizobium; Stenoxybacter; SB-34; Herpetosiphonaceae; Actinobaculum; Trabulsiella; Coxiellaceae; Blastococcus; Arabis divicarpa; Pirellula staleyi; Pseudonocardia; Massilia; Phaeospirillum; Rhodobacteraceae; Nostoc; Pseudomonas fragi; Rhodococcus; Loripes lacteus gill symbiont; Actinomadura nitritigenes; Bacillaceae; Actinomadura; Saccharomonospora; Zhouia; Brevundimonas; Acidobacteriales; Actinomycetales; Brevibacillus levickii; Anaerolineae; Chlamydiae; Desulfovibrio; Streptomyces reticuliscabiei; Taraxacum officinale; Azohydromonas; Anaerolineales; Hydrogenophilaceae; Rubrobacter radiotolerans; Halothermothrix; Candidatus Nitrososphaera; Actinomadura madurae; Marinomonas aquimarina; Clostridium ultunense; wb1_H11; Waddliaceae; Methylobacterium podarium; Verrucomicrobiales; Fibrobacter intestinalis; OP3; Verrucosispora gifhornensis; Actinokineospora diospyrosa; Pimelobacter; Balneimonas; Okibacterium; Cytophaga; Sphingobium yanoikuyae; MVP-88; Actinoplanes ferrugineus; Rhodocyclales; Natranaerobiaceae; Candidatus Nitrososphaeragargensis; Aurantimonas; Streptomyces stelliscabiei; Pasteurella aerogenes; Opitutus; soil bacterial community; Carex stenophylla; Rhodanobacter lindaniclasticus; Cohnella; Microscilla; Pseudoalteromonas atlantica; Steroidobacter; Spartobacteria; Cerastium arvense; Oceanospirillales; Hesperostipa curtiseta; RB384; Mobiluncus mulieris; Actinoplanes italicus; Rubrobacter; Lentisphaerae; Epsilonproteobacteria; Salinibacillus; Tatlockia maceachernii; Pasteurellaceae; Porphyrobacter meromictius; Bacillus nealsonii; Deferribacteres; Jonquetella; MC47; mle1-48; Thermomicrobia; Cryptosporangium; Legionella pneumophila; Salinispora arenicola; Planifilum fulgidum; Laribacter hongkongensis; Dictyoglomus turgidum; Synergistia; Campylobacter; S1a-1H; Oscillochloris trichoides; Streptomyces yanglinensis; euryarchaeota; Ignatzschineria larvae; Ralstonia solanacearum; Deferribacterales; Solibacteraceae; Enterobacterialendo symbiont of Drosicha corpulenta; Methylophilales; Thermobaculum terrenum; Streptosporangium violaceochromogenes; Nannocystis; Idiomarina; Nitrosomonadales; Ecwsrb050; Echinicola pacifica; Leptospira; Dichelobacter nodosus; Thiomicrospira crunogena; Kosmotoga; Singulisphaera acidiphila; Stramenopiles; Caulobacteraceae; Holophagales; Enterococcus dispar; Bosea; Terriglobus; Aquicella; Brachyspirae; Leptospira interrogans; Thermodesulfovibrio yellowstonii; mle1-12; Mesorhizobium; Dokdonella; Agromyces; Streptomyces nitrosporeus; Pirellulaceae; Planctomycetes; Glaciecola; Thermoanaerobacterales; Actinomycetospora; Burkholderiaceae; Prosthecobacter debontii; Afipiagenosp.9; Myxococcaceae; Pseudonocardia yunnanensis; Rhodococcus globerulus; Deinococcaceae; Thermomicrobiales; Devosia; Lysobacter; Campylobacter showae; FFCH6980; Sporosarcina; Candidatus Haliscomenobactercalcifugiens; WPS-2; PRR-11; PRR-10; Luteibacter; Thermotoga lettingae; Verrucomicrobia; PRR-12; FFCH4570; Leptospirae; Chloroflexi; Acidimicrobiaceae; Ectothiorhodospira sp.BogoriaRed; Burkholderia; Dokdonella koreensis; Ectothiorhodospiraceae; Aeromicrobium fastidiosum; NKB19; Polaromonas; Geobacter; Rhodospirillum centenum; Leptospirales; Kueneniae; GKS2-174; Marinospirillum; Cellulomon asxylanilytica; Euzebia; Protochlamydia naegleriophila; Acidobacteria-5; Cupriavidus; Aminobacter; Enterobacter radicincitans; Sphingobacteriaceae; Campylobacterales; Nautilia profundicola; Burkholderia glathei; Promicromonosporaceae; Methanosarcina; Streptomyces radiopugnans; SJA-36; Halobacteriales; Labrenzia aggregata; Aerococcaceae; Frankia sp.EAN1pec; Streptomyces flavotricini; Sphingobium; Alphaproteobacteria; Xanthobacteraceae; Chromatiaceae; Nitrososphaeraceae; Roseiflexales; Thermosinus; Myxococcales; Erigeron glabellus; Sphingobacteriales; Kouleothrix; Thermotogaceae; Oceanobacillus; Chlorobia; Bradyrhizobium; Halostagnicola; DS-18; Sulfurihydrogenibium azorense; Poa palustris; PW285; Synechococcus; Galium boreale; Sphingobium herbicidovorans; Bouteloua gracilis; Azospirillum sp.B510; Nitrosomonadaceae; Picrophilus; Methanosarcina barkeri; Nocardia fluminea; EB1017; Kaistobacter; Sphingomonas azotifigens; Flavisolibacter; Psychrobacter sp.PRwf-1; Desulfovibrionales; Festuca altaica ssp. Hallii; koll11; Nitrospirae; koll13; Microbacteriaceae; Halobacteria; Solirubrobacter; Herpetosiphon; Bacillus longiquaesitum; NB1-i; NB1-j; Levilinea; Paenibacillus terrae; Bacillus coahuilensis; envOPS12; SJA-28; Roseiflexus; Planotetraspora; Rickettsiella; crenarchaeota; Holophagae; Nannocystaceae; Dolo_23; Comamonadaceae; WD294; Novosphingobium; Thermodesulfovibrio; OM190; Gemmata obscuriglobus; Lactobacillaceae; Skermanella; Mobiluncus curtisii; Anaeromyxobacter sp.Fw109-5; Sporolactobacillus nakayamae; Thioclava; Rickettsiella grylli; Kineococcus; Hydrogenophilus thermoluteolus; Thermotoga; Jonquetella anthropi; Piscirickettsiaceae; Ideonella; Candidatus Phytoplasmamali; Cellvibrio japonicus; Muhlenbergia richardsonis; Thiomicrospira; Azospirillum melinis; Nautilia; CTD005-82B-02; Bogoriellaceae; Pseudomonas umsongensis; Desulfurellales; Chloracidobacteria; Methanosarcinaceae; Armatimonas; Flexibacter; Mollicutes; Methylobacterium radiotolerans; Brachyspira pilosicoli; RB25; Coriobacteriaceae; Microbispora rosea; Bellilinea; Acidovorax; Dictyoglomus; Thermoactinomycetaceae; Deinococcus deserti; Streptosporangiaceae; Astragalus flexuosus; Cardiobacteriales; Amycolatopsis; Legionellales; Frateuria; Magnetococcus sp.MC-1; AD3; HN1-15; Picrophilaceae; BRC1; Pedobacter; Sulfurihydrogenibium sp.YO3AOP1; Promicromonospora; Planctomycetales; Juncus balticus; Desulfurellaceae; Desulfovibrionaceae; Flavobacterium; Roseivirga; Blastococcus aggregatus; Nocardioides oleivorans; iii1-8; Leptospiraceae; Campanula rotundifolia; Luteimonas; Sphingopyxis; Nocardioidaceae; Erythrobacter; Streptomyces spiroverticillatus; H39; Thermopallium; Idiomarinaceae; Desulfuromonadales; Thiotrichales; Acidobacteria; B07_WMSP1; Oceanospirillaceae; Elymus lanceolatus ssp. lanceolatus; Planctomycea; Pelobacter propionicus; Methanosarcinales; Entotheonellales; Solibacteres; Pasteurellales; Sphingomonadales; Mechercharimyces mesophilus; Sphingomonas wittichii; Alcanivoracaceae; Agoseris glauca; Sporolactobacillaceae; Geobacter psychrophilus; TM6; Oscillatoriales; Caminibacter; TM7; Knoellia subterranea; Pseudomonas mandelii; Rhodomicrobium; Facklamia sourekii; Halobacillus virgiliensis; Rhodanobacter; Symphyotrichum ericoides; Carex pensylvanica; Slackia; Bdellovibrio bacteriovorus; Lactobacillus kefiranofaciens; Labrys methylaminiphilus; Jiangella; Deltaproteobacteria; Acholeplasmataceae; Sporolactobacillus; SC72; Verrucomicrobia subdivision 3; Frankia; Tenericutes; Thermotogales; Bacillales; Lachnospiraceae; Intrasporangiaceae; Candidatus Protochlamydia; MIZ46; Methylococcus; Polyangiaceae; Laceyella; Actinomycetaceae; Aurantimonadaceae; Saccharothrix; Ectothiorhodospira; Caminibacter mediatlanticus; Synergistetes; Fibrobacterales; Paenibacillus chondroitinus; Roseisalinus; SM2F11; Roseiflexus castenholzii; Caldilineaceae; Kineosporia; Thermopallium natronophilum; Halobacillus; Thermobaculum; Rubrobacterales; Chthonomonas calidirosea; Bacteroidales; Opitutaceae; Micromonospora; Nitratiruptor sp.SB155-2; Kouleothrixaceae; Armatimonadaceae; Oscillatoriophycideae; Neisseriales; Sporichthyaceae; LD1-PA13; Azomonas macrocytogenes; Planktothricoides; Natranaerobiales; Mycoplasma phocicerebrale; Dictyoglomaceae; Opitutaceae bacterium TAV2; Flavobacteriaceae; structural equation modeling; Ralstonia; Peptococcaceae; Thermomonosporaceae; Pilimelia; Sporichthya; Mycoplasmataceae; FFCH393; Bradyrhizobiaceae; JG37-AG-70; Helictotrichon hookerii; Dehalobacteriaceae; Phyllobacteriaceae; Dehalococcoidaceae; Acidimicrobiumf errooxidans; Moraxellaceae; Caldilinea; Burkholderia oklahomensis; Aquimonas; Sulfobacillus; Syntrophobacterales; Bacillus flexus; Methyloversatilis universalis; Thermobacula; Brachyspiraceae; Rhizobium multihospitium; Syntrophobacter; Brachyspira; Knoellia; Nocardia; Idiomarina loihiensis; Koribacteraceae; Arabis hirsuta; Micromonosporaceae; Hesperostipa comata; Carex obtustata; Solimonas; Lamprocystis; Methylacidiphilae; Rhizobiaceae; Niabella; Alicyclobacillaceae; Mesorhizobium huakuii; Thermobaculaceae; Microbispora; Amaricoccus; Bdellovibrionaceae; Bacteroidetes; Amycolatopsis mediterranei; Deinococci; Rhodopirellula; Oscillochloridaceae; Nonomuraea; Tatumella; Dictyoglomia; Actinobacteria; GCA004; Artemisia ludoviciana; S085; Streptomycetaceae; Dehalococcoides; Sphingomonas; Paenisporosarcina; Mechercharimyces; S15B-MN24; Elusimicrobiales; Pseudoxanthomonas; Thermoanaerobacteraceae; Lutibacterium; Nostocales; Isosphaeraceae; Streptomyces thermovulgaris; Catellato sporacitrea; Thiocystis gelatinosa; Proteobacteria; Sphingomonas melonis; Olsenella profusa; Penstemon procerus; AKYG885; Oribacterium sp.oraltaxon078; Methylobacterium adhaesivum; Syntrophobacteraceae; Androsace sepentrionalis; Desulfovibrio bastinii; Planctomycetaceae; S47; Desulfofaba; Chlamydiales; Laribacter; Alcaligenaceae; Micromonospora echinaurantiaca; Thermaerobacter subterraneus; Archangium; Leptonema; Dictyoglomi; Micromonospora aurantiaca; Planifilum; Chthonomonas; Phycisphaerales; Bacteroidia; Cellulomonas; Aquificae; Pelotomaculum; Geodermatophilaceae; Iamia; Thermoplasmata; Clostridium; Stellaria longifolia; Symphyotrichum laeve; Paenibacillus sp.JDR-2; Methanomicrobia; PAUC37f; Nocardiaceae; Synergistales; Roseisalinus antarcticus; Myxococcus stipitatus; Herpetosiphon aurantiacus; Nitrospira; Pseudomonas cuatrocienegasensis; Pirellulales; Chroococcales; Fervidobacterium; Cupriavidus oxalaticus; Aquamonas; Chloroplast; Sinobacteraceae; Fibrobacteraceae; Legionellaceae; Geobacteraceae; Mesorhizobium albiziae; Verrucosispora; Pseudonocardiaceae; Gemmatimonas; Pelotomaculum thermopropionicum; Amycolatopsis lactamdurans; GOUTA4; Pseudomonas boreopolis; Bdellovibrionales; Arthrobacter; Thermaerobacter; Pseudomonadales; agg27; Caulobacterales; Thermobaculales; Desulfomicrobium; Thermosipho melanesiensis; Linum lewisii; Actinoplanes teichomyceticus; Actinoallomurus iriomotensis; Rosa woodsii; Mycobacterium gordonae; Mycoplasmatales; Roseomonas; Saccharomonospora viridis; Edaphobacter; Cystobacter; Hydrogenothermaceae; Anaerobaculaceae; PBS-25; Phycisphaerae; Frateuria aurantia; Solirubrobacterales; Verrucomicrobiaceae; Sphingopyxis macrogoltabida; Anemone canadensis; Bacteroides; Georgenia; Candidatus Cardiniumhertigii; Patulibacteraceae; Marmoricola; Bacillus weihenstephanensis; Aphanizomenon; Chlorophyta; Candidatus Xiphinematobacter; Mycoplasma conjunctivae; Spirochaetes; Desulfobacteraceae; CL500-29; Chloroflexus; Spirosoma; Inquilinus; Chthonomonadaceae; Sphaerlacea coccinea; Firmicutes; CL500-15; Actinopolymorpha; Phycicoccus; Natranaerobius thermophilus; Oxalobacter; Thermosipho africanus; Nostocophycideae; Paenibacillus borealis; Thermi; Hyphomicrobium; evenness; Symbiobacteriaceae; Actinosynnemataceae; Enterococcaceae; Methylococcus capsulatus; Thermoanaerobacter; Oribacterium; Phyllobacterium; S0208; TK17; Euzebiales; Herpetosiphonales; Cellvibrio; Chloroherpeton thalassium; SOGA31; Hyphomicrobiaceae; Nakamurellaceae; invasive ecology; Opitutae; Aquificales; Alicyclobacillus; vadinHA49; Cyanobacteria; MVS-40; Haliscomenobacter; Methylobacterium fujisawaense; Synechococcus sp.PCC7002; Syntrophobacter fumaroxidans; Phenylobacterium; Caulobacter; Lactobacillus; Streptomyces antibioticus; WCHB1-50; Chloroflexi-4; Cryobacterium; Prosthecobacter; Astragalus agrestis; Dictyoglomales; Chloroflexales; Desulfuromonas svalbardensis; Anaerobaculum; Marinospirillum insulare; Acidobacteriaceae; Solirubrobacteraceae; Sporosarcina aquimarina; Entotheonellaceae; Acholeplasmatales; RA13C7; Cystobacteraceae; Verrucomicrobiae; Natranaerobius; SBRH58; Sonchus arvensis; SJA-4; Chthoniobacter; Singulisphaera; Edaphobacter modestum; Azomonas; Fibrobacter; Kribbella; Planctomyces; Antarc*; antarcticus
• Online Access: https://dx.doi.org/10.5061/dryad.5sn8m; http://datadryad.org/stash/dataset/doi:10.5061/dryad.5sn8m

Plant and soil communities are tightly linked, but the mechanisms by which the invasion of an exotic plant and the resulting shifts in plant diversity and productivity influence soil bacterial community structure remain poorly understood. We investigated the effects of invasive smooth brome (Bromus...