Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...

Domestication can have adverse genetic consequences, which may reduce the fitness of individuals once released back into the wild. Many wild Atlantic salmon (Salmo salar L.) populations are threatened by anthropogenic influences and they are supplemented with captively bred fish. The Atlantic salmon...

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Bibliographic Details
Main Authors: Mäkinen, Hannu, Vasemägi, Anti, McGinnity, Philip, Cross, Tom F., Primmer, Craig, Primmer, Craig R.
Format: Dataset
Language:English
Published: Dryad 2014
Subjects:
Online Access:https://dx.doi.org/10.5061/dryad.5p7s0
https://datadryad.org/stash/dataset/doi:10.5061/dryad.5p7s0
id ftdatacite:10.5061/dryad.5p7s0
record_format openpolar
spelling ftdatacite:10.5061/dryad.5p7s0 2024-02-04T09:58:50+01:00 Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ... Mäkinen, Hannu Vasemägi, Anti McGinnity, Philip Cross, Tom F. Primmer, Craig Primmer, Craig R. 2014 https://dx.doi.org/10.5061/dryad.5p7s0 https://datadryad.org/stash/dataset/doi:10.5061/dryad.5p7s0 en eng Dryad https://dx.doi.org/10.1111/eva.12230 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 Captive Populations Salmo salar Aquaculture Dataset dataset 2014 ftdatacite https://doi.org/10.5061/dryad.5p7s010.1111/eva.12230 2024-01-05T01:14:15Z Domestication can have adverse genetic consequences, which may reduce the fitness of individuals once released back into the wild. Many wild Atlantic salmon (Salmo salar L.) populations are threatened by anthropogenic influences and they are supplemented with captively bred fish. The Atlantic salmon is also widely used in selective breeding programs to increase the mean trait values for desired phenotypic traits. We analyzed a genome-wide set of SNPs in three domesticated Atlantic salmon strains and their wild conspecifics to identify loci underlying domestication. The genetic differentiation between domesticated strains and wild populations was low (FST < 0.03), and domesticated strains harbored similar levels of genetic diversity compared to their wild conspecifics. Only a few loci showed footprints of selection, and these loci were located in different linkage groups among the different wild population/hatchery strain comparisons. Simulated scenarios indicated that differentiation in quantitative trait ... : Saint_John_Genotype_dataFile contains SNP genotypes for the River Saint John Atlantic salmon strain and their wild conspecifics.River Burrishoole Genotype_dataFile contains SNP genotype data for River Burrishoole Atlantic salmon strain and their wild conspecifics.Vindel Genotype_dataFile contains SNP genotype data for River Vindel/Ume Atlantic salmon strain and and their wild conspecifics. ... Dataset Atlantic salmon Salmo salar DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Captive Populations
Salmo salar
Aquaculture
spellingShingle Captive Populations
Salmo salar
Aquaculture
Mäkinen, Hannu
Vasemägi, Anti
McGinnity, Philip
Cross, Tom F.
Primmer, Craig
Primmer, Craig R.
Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...
topic_facet Captive Populations
Salmo salar
Aquaculture
description Domestication can have adverse genetic consequences, which may reduce the fitness of individuals once released back into the wild. Many wild Atlantic salmon (Salmo salar L.) populations are threatened by anthropogenic influences and they are supplemented with captively bred fish. The Atlantic salmon is also widely used in selective breeding programs to increase the mean trait values for desired phenotypic traits. We analyzed a genome-wide set of SNPs in three domesticated Atlantic salmon strains and their wild conspecifics to identify loci underlying domestication. The genetic differentiation between domesticated strains and wild populations was low (FST < 0.03), and domesticated strains harbored similar levels of genetic diversity compared to their wild conspecifics. Only a few loci showed footprints of selection, and these loci were located in different linkage groups among the different wild population/hatchery strain comparisons. Simulated scenarios indicated that differentiation in quantitative trait ... : Saint_John_Genotype_dataFile contains SNP genotypes for the River Saint John Atlantic salmon strain and their wild conspecifics.River Burrishoole Genotype_dataFile contains SNP genotype data for River Burrishoole Atlantic salmon strain and their wild conspecifics.Vindel Genotype_dataFile contains SNP genotype data for River Vindel/Ume Atlantic salmon strain and and their wild conspecifics. ...
format Dataset
author Mäkinen, Hannu
Vasemägi, Anti
McGinnity, Philip
Cross, Tom F.
Primmer, Craig
Primmer, Craig R.
author_facet Mäkinen, Hannu
Vasemägi, Anti
McGinnity, Philip
Cross, Tom F.
Primmer, Craig
Primmer, Craig R.
author_sort Mäkinen, Hannu
title Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...
title_short Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...
title_full Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...
title_fullStr Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...
title_full_unstemmed Data from: Population genomic analyses of early phase Atlantic salmon (Salmo salar) domestication/captive breeding. ...
title_sort data from: population genomic analyses of early phase atlantic salmon (salmo salar) domestication/captive breeding. ...
publisher Dryad
publishDate 2014
url https://dx.doi.org/10.5061/dryad.5p7s0
https://datadryad.org/stash/dataset/doi:10.5061/dryad.5p7s0
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://dx.doi.org/10.1111/eva.12230
op_rights Creative Commons Zero v1.0 Universal
https://creativecommons.org/publicdomain/zero/1.0/legalcode
cc0-1.0
op_doi https://doi.org/10.5061/dryad.5p7s010.1111/eva.12230
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