demultiplexed & trimmed reads for all samples (n=81)

Compressed package with demultiplexed and trimmed RADseq data for 81 samples (i.e. 81 .fastq.gz files representing all samples listed in Appendix S1). Demultiplexing and trimming was done in PyRAD v. 2.17 (Eaton 2014). Reads were de-multiplexed allowing for a maximum of two mismatches in each eight...

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Bibliographic Details
Main Authors: Lewis, Lily, Biersma, Elisabeth M, Carey, Sarah B, Holsinger, Kent, McDaniel, Stuart F, Rozzi, Ricardo, Goffinet, Bernard
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2017
Subjects:
Online Access:https://dx.doi.org/10.5061/dryad.2cs4v/2
http://datadryad.org/resource/doi:10.5061/dryad.2cs4v/2
id ftdatacite:10.5061/dryad.2cs4v/2
record_format openpolar
spelling ftdatacite:10.5061/dryad.2cs4v/2 2023-05-15T13:51:04+02:00 demultiplexed & trimmed reads for all samples (n=81) Lewis, Lily Biersma, Elisabeth M Carey, Sarah B Holsinger, Kent McDaniel, Stuart F Rozzi, Ricardo Goffinet, Bernard 2017 https://dx.doi.org/10.5061/dryad.2cs4v/2 http://datadryad.org/resource/doi:10.5061/dryad.2cs4v/2 unknown Dryad Digital Repository https://dx.doi.org/10.5061/dryad.2cs4v http://creativecommons.org/publicdomain/zero/1.0 CC0 Amphitropical Bryophyte Lichen Long-Distance Dispersal RADseq Global Northwestern North America South America Magellanic sub-Antarctic ecoregion Miocene - Pleistocene Splachnaceae Bryopsida dataset Dataset DataFile 2017 ftdatacite https://doi.org/10.5061/dryad.2cs4v/2 https://doi.org/10.5061/dryad.2cs4v 2021-11-05T12:55:41Z Compressed package with demultiplexed and trimmed RADseq data for 81 samples (i.e. 81 .fastq.gz files representing all samples listed in Appendix S1). Demultiplexing and trimming was done in PyRAD v. 2.17 (Eaton 2014). Reads were de-multiplexed allowing for a maximum of two mismatches in each eight bp barcode, and restriction enzyme cut sites and adapter sequences were removed. .fastq.gz files are named as such: Sample ID-Collection#.fastq.gz. For example, Nepal_1_1101.fastq.gz is for the sample identified as "Nepal_1" in the associated publication, which was also assigned collection number 1101. The sample ID provides information on the general collection locality. Dataset Antarc* Antarctic DataCite Metadata Store (German National Library of Science and Technology) Antarctic
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Amphitropical
Bryophyte
Lichen
Long-Distance Dispersal
RADseq
Global
Northwestern North America
South America
Magellanic sub-Antarctic ecoregion
Miocene - Pleistocene
Splachnaceae
Bryopsida
spellingShingle Amphitropical
Bryophyte
Lichen
Long-Distance Dispersal
RADseq
Global
Northwestern North America
South America
Magellanic sub-Antarctic ecoregion
Miocene - Pleistocene
Splachnaceae
Bryopsida
Lewis, Lily
Biersma, Elisabeth M
Carey, Sarah B
Holsinger, Kent
McDaniel, Stuart F
Rozzi, Ricardo
Goffinet, Bernard
demultiplexed & trimmed reads for all samples (n=81)
topic_facet Amphitropical
Bryophyte
Lichen
Long-Distance Dispersal
RADseq
Global
Northwestern North America
South America
Magellanic sub-Antarctic ecoregion
Miocene - Pleistocene
Splachnaceae
Bryopsida
description Compressed package with demultiplexed and trimmed RADseq data for 81 samples (i.e. 81 .fastq.gz files representing all samples listed in Appendix S1). Demultiplexing and trimming was done in PyRAD v. 2.17 (Eaton 2014). Reads were de-multiplexed allowing for a maximum of two mismatches in each eight bp barcode, and restriction enzyme cut sites and adapter sequences were removed. .fastq.gz files are named as such: Sample ID-Collection#.fastq.gz. For example, Nepal_1_1101.fastq.gz is for the sample identified as "Nepal_1" in the associated publication, which was also assigned collection number 1101. The sample ID provides information on the general collection locality.
format Dataset
author Lewis, Lily
Biersma, Elisabeth M
Carey, Sarah B
Holsinger, Kent
McDaniel, Stuart F
Rozzi, Ricardo
Goffinet, Bernard
author_facet Lewis, Lily
Biersma, Elisabeth M
Carey, Sarah B
Holsinger, Kent
McDaniel, Stuart F
Rozzi, Ricardo
Goffinet, Bernard
author_sort Lewis, Lily
title demultiplexed & trimmed reads for all samples (n=81)
title_short demultiplexed & trimmed reads for all samples (n=81)
title_full demultiplexed & trimmed reads for all samples (n=81)
title_fullStr demultiplexed & trimmed reads for all samples (n=81)
title_full_unstemmed demultiplexed & trimmed reads for all samples (n=81)
title_sort demultiplexed & trimmed reads for all samples (n=81)
publisher Dryad Digital Repository
publishDate 2017
url https://dx.doi.org/10.5061/dryad.2cs4v/2
http://datadryad.org/resource/doi:10.5061/dryad.2cs4v/2
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_relation https://dx.doi.org/10.5061/dryad.2cs4v
op_rights http://creativecommons.org/publicdomain/zero/1.0
op_rightsnorm CC0
op_doi https://doi.org/10.5061/dryad.2cs4v/2
https://doi.org/10.5061/dryad.2cs4v
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