demultiplexed & trimmed reads for all samples (n=81)

Compressed package with demultiplexed and trimmed RADseq data for 81 samples (i.e. 81 .fastq.gz files representing all samples listed in Appendix S1). Demultiplexing and trimming was done in PyRAD v. 2.17 (Eaton 2014). Reads were de-multiplexed allowing for a maximum of two mismatches in each eight...

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Bibliographic Details
Main Authors: Lewis, Lily, Biersma, Elisabeth M, Carey, Sarah B, Holsinger, Kent, McDaniel, Stuart F, Rozzi, Ricardo, Goffinet, Bernard
Format: Dataset
Language:unknown
Published: Dryad Digital Repository 2017
Subjects:
Amphitropical
Bryophyte
Lichen
Long-Distance Dispersal
RADseq
Global
Northwestern North America
South America
Magellanic sub-Antarctic ecoregion
Miocene - Pleistocene
Splachnaceae
Bryopsida
Antarctic
Antarc*
Online Access:https://dx.doi.org/10.5061/dryad.2cs4v/2
http://datadryad.org/resource/doi:10.5061/dryad.2cs4v/2
Description
Summary:Compressed package with demultiplexed and trimmed RADseq data for 81 samples (i.e. 81 .fastq.gz files representing all samples listed in Appendix S1). Demultiplexing and trimming was done in PyRAD v. 2.17 (Eaton 2014). Reads were de-multiplexed allowing for a maximum of two mismatches in each eight bp barcode, and restriction enzyme cut sites and adapter sequences were removed. .fastq.gz files are named as such: Sample ID-Collection#.fastq.gz. For example, Nepal_1_1101.fastq.gz is for the sample identified as "Nepal_1" in the associated publication, which was also assigned collection number 1101. The sample ID provides information on the general collection locality.

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