Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ...
Understanding the habitat use patterns of migratory fish, such as Atlantic salmon (Salmo salar L.), and the natural and anthropogenic impacts on them, is aided by the ability to identify individuals to their stock of origin. Presented here are the results of an analysis of informative single nucleot...
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Online Access: | https://dx.doi.org/10.5061/dryad.12d36 https://datadryad.org/stash/dataset/doi:10.5061/dryad.12d36 |
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ftdatacite:10.5061/dryad.12d36 2024-02-04T09:58:53+01:00 Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... Gilbey, John Cauwelier, Eef Coulson, Mark W. Stradmeyer, Lee Sampayo, James N. Armstrong, Anja Verspoor, Eric Corrigan, Laura Shelley, Jonathan Middlemas, Stuart 2017 https://dx.doi.org/10.5061/dryad.12d36 https://datadryad.org/stash/dataset/doi:10.5061/dryad.12d36 en eng Dryad https://dx.doi.org/10.1371/journal.pone.0164327 Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 Individual Assignment Salmo salar genetic structuring mixed stock analysis Holocene Dataset dataset 2017 ftdatacite https://doi.org/10.5061/dryad.12d3610.1371/journal.pone.0164327 2024-01-05T00:42:33Z Understanding the habitat use patterns of migratory fish, such as Atlantic salmon (Salmo salar L.), and the natural and anthropogenic impacts on them, is aided by the ability to identify individuals to their stock of origin. Presented here are the results of an analysis of informative single nucleotide polymorphic (SNP) markers for detecting genetic structuring in Atlantic salmon in Scotland and NE England and their ability to allow accurate genetic stock identification. 3,787 fish from 147 sites covering 27 rivers were screened at 5,568 SNP markers. In order to identify a cost-effective subset of SNPs, they were ranked according to their ability to differentiate between fish from different rivers. A panel of 288 SNPs was used to examine both individual assignments and mixed stock fisheries and eighteen assignment units were defined. The results improved greatly on previously available methods and, for the first time, fish caught in the marine environment can be confidently assigned to geographically ... : Scottish Baseline SNP PanelRaw genotypes for the baseline SNP panel developed for Scotland and NE England. ... Dataset Atlantic salmon Salmo salar DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Individual Assignment Salmo salar genetic structuring mixed stock analysis Holocene |
spellingShingle |
Individual Assignment Salmo salar genetic structuring mixed stock analysis Holocene Gilbey, John Cauwelier, Eef Coulson, Mark W. Stradmeyer, Lee Sampayo, James N. Armstrong, Anja Verspoor, Eric Corrigan, Laura Shelley, Jonathan Middlemas, Stuart Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... |
topic_facet |
Individual Assignment Salmo salar genetic structuring mixed stock analysis Holocene |
description |
Understanding the habitat use patterns of migratory fish, such as Atlantic salmon (Salmo salar L.), and the natural and anthropogenic impacts on them, is aided by the ability to identify individuals to their stock of origin. Presented here are the results of an analysis of informative single nucleotide polymorphic (SNP) markers for detecting genetic structuring in Atlantic salmon in Scotland and NE England and their ability to allow accurate genetic stock identification. 3,787 fish from 147 sites covering 27 rivers were screened at 5,568 SNP markers. In order to identify a cost-effective subset of SNPs, they were ranked according to their ability to differentiate between fish from different rivers. A panel of 288 SNPs was used to examine both individual assignments and mixed stock fisheries and eighteen assignment units were defined. The results improved greatly on previously available methods and, for the first time, fish caught in the marine environment can be confidently assigned to geographically ... : Scottish Baseline SNP PanelRaw genotypes for the baseline SNP panel developed for Scotland and NE England. ... |
format |
Dataset |
author |
Gilbey, John Cauwelier, Eef Coulson, Mark W. Stradmeyer, Lee Sampayo, James N. Armstrong, Anja Verspoor, Eric Corrigan, Laura Shelley, Jonathan Middlemas, Stuart |
author_facet |
Gilbey, John Cauwelier, Eef Coulson, Mark W. Stradmeyer, Lee Sampayo, James N. Armstrong, Anja Verspoor, Eric Corrigan, Laura Shelley, Jonathan Middlemas, Stuart |
author_sort |
Gilbey, John |
title |
Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... |
title_short |
Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... |
title_full |
Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... |
title_fullStr |
Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... |
title_full_unstemmed |
Data from: Accuracy of assignment of Atlantic salmon (Salmo salar L.) to rivers and regions in Scotland and northeast England based on single nucleotide polymorphism (SNP) markers. ... |
title_sort |
data from: accuracy of assignment of atlantic salmon (salmo salar l.) to rivers and regions in scotland and northeast england based on single nucleotide polymorphism (snp) markers. ... |
publisher |
Dryad |
publishDate |
2017 |
url |
https://dx.doi.org/10.5061/dryad.12d36 https://datadryad.org/stash/dataset/doi:10.5061/dryad.12d36 |
genre |
Atlantic salmon Salmo salar |
genre_facet |
Atlantic salmon Salmo salar |
op_relation |
https://dx.doi.org/10.1371/journal.pone.0164327 |
op_rights |
Creative Commons Zero v1.0 Universal https://creativecommons.org/publicdomain/zero/1.0/legalcode cc0-1.0 |
op_doi |
https://doi.org/10.5061/dryad.12d3610.1371/journal.pone.0164327 |
_version_ |
1789963464344600576 |