Detection of foraging behavior from accelerometer data using U-Net type convolutional networks
Narwhal is one of the most mysterious marine mammals, due to its isolated habitat in the Arctic region. Tagging is a technology that has the potential to explore the activities of this species, where behavioral information can be collected from instrumented individuals. This includes accelerometer d...
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Online Access: | https://dx.doi.org/10.48550/arxiv.2101.01992 https://arxiv.org/abs/2101.01992 |
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ftdatacite:10.48550/arxiv.2101.01992 2023-05-15T15:15:03+02:00 Detection of foraging behavior from accelerometer data using U-Net type convolutional networks Ngô, Manh Cuong Selvan, Raghavendra Tervo, Outi Heide-Jørgensen, Mads Peter Ditlevsen, Susanne 2021 https://dx.doi.org/10.48550/arxiv.2101.01992 https://arxiv.org/abs/2101.01992 unknown arXiv Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 CC-BY Applications stat.AP Quantitative Methods q-bio.QM FOS Computer and information sciences FOS Biological sciences Article CreativeWork article Preprint 2021 ftdatacite https://doi.org/10.48550/arxiv.2101.01992 2022-03-10T15:01:19Z Narwhal is one of the most mysterious marine mammals, due to its isolated habitat in the Arctic region. Tagging is a technology that has the potential to explore the activities of this species, where behavioral information can be collected from instrumented individuals. This includes accelerometer data, diving and acoustic data as well as GPS positioning. An essential element in understanding the ecological role of toothed whales is to characterize their feeding behavior and estimate the amount of food consumption. Buzzes are sounds emitted by toothed whales that are related directly to the foraging behaviors. It is therefore of interest to measure or estimate the rate of buzzing to estimate prey intake. The main goal of this paper is to find a way to detect prey capture attempts directly from accelerometer data, and thus be able to estimate food consumption without the need for the more demanding acoustic data. We develop 3 automated buzz detection methods based on accelerometer and depth data solely. We use a dataset from 5 narwhals instrumented in East Greenland in 2018 to train, validate and test a logistic regression model and the machine learning algorithms random forest and deep learning, using the buzzes detected from acoustic data as the ground truth. The deep learning algorithm performed best among the tested methods. We conclude that reliable buzz detectors can be derived from high-frequency-sampling, back-mounted accelerometer tags, thus providing an alternative tool for studies of foraging ecology of marine mammals in their natural environments. We also compare buzz detection with certain movement patterns, such as sudden changes in acceleration (jerks), found in other marine mammal species for estimating prey capture. We find that narwhals do not seem to make big jerks when foraging and conclude that their hunting patterns in that respect differ from other marine mammals. Article in Journal/Newspaper Arctic East Greenland Greenland narwhal* toothed whales DataCite Metadata Store (German National Library of Science and Technology) Arctic Greenland |
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DataCite Metadata Store (German National Library of Science and Technology) |
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topic |
Applications stat.AP Quantitative Methods q-bio.QM FOS Computer and information sciences FOS Biological sciences |
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Applications stat.AP Quantitative Methods q-bio.QM FOS Computer and information sciences FOS Biological sciences Ngô, Manh Cuong Selvan, Raghavendra Tervo, Outi Heide-Jørgensen, Mads Peter Ditlevsen, Susanne Detection of foraging behavior from accelerometer data using U-Net type convolutional networks |
topic_facet |
Applications stat.AP Quantitative Methods q-bio.QM FOS Computer and information sciences FOS Biological sciences |
description |
Narwhal is one of the most mysterious marine mammals, due to its isolated habitat in the Arctic region. Tagging is a technology that has the potential to explore the activities of this species, where behavioral information can be collected from instrumented individuals. This includes accelerometer data, diving and acoustic data as well as GPS positioning. An essential element in understanding the ecological role of toothed whales is to characterize their feeding behavior and estimate the amount of food consumption. Buzzes are sounds emitted by toothed whales that are related directly to the foraging behaviors. It is therefore of interest to measure or estimate the rate of buzzing to estimate prey intake. The main goal of this paper is to find a way to detect prey capture attempts directly from accelerometer data, and thus be able to estimate food consumption without the need for the more demanding acoustic data. We develop 3 automated buzz detection methods based on accelerometer and depth data solely. We use a dataset from 5 narwhals instrumented in East Greenland in 2018 to train, validate and test a logistic regression model and the machine learning algorithms random forest and deep learning, using the buzzes detected from acoustic data as the ground truth. The deep learning algorithm performed best among the tested methods. We conclude that reliable buzz detectors can be derived from high-frequency-sampling, back-mounted accelerometer tags, thus providing an alternative tool for studies of foraging ecology of marine mammals in their natural environments. We also compare buzz detection with certain movement patterns, such as sudden changes in acceleration (jerks), found in other marine mammal species for estimating prey capture. We find that narwhals do not seem to make big jerks when foraging and conclude that their hunting patterns in that respect differ from other marine mammals. |
format |
Article in Journal/Newspaper |
author |
Ngô, Manh Cuong Selvan, Raghavendra Tervo, Outi Heide-Jørgensen, Mads Peter Ditlevsen, Susanne |
author_facet |
Ngô, Manh Cuong Selvan, Raghavendra Tervo, Outi Heide-Jørgensen, Mads Peter Ditlevsen, Susanne |
author_sort |
Ngô, Manh Cuong |
title |
Detection of foraging behavior from accelerometer data using U-Net type convolutional networks |
title_short |
Detection of foraging behavior from accelerometer data using U-Net type convolutional networks |
title_full |
Detection of foraging behavior from accelerometer data using U-Net type convolutional networks |
title_fullStr |
Detection of foraging behavior from accelerometer data using U-Net type convolutional networks |
title_full_unstemmed |
Detection of foraging behavior from accelerometer data using U-Net type convolutional networks |
title_sort |
detection of foraging behavior from accelerometer data using u-net type convolutional networks |
publisher |
arXiv |
publishDate |
2021 |
url |
https://dx.doi.org/10.48550/arxiv.2101.01992 https://arxiv.org/abs/2101.01992 |
geographic |
Arctic Greenland |
geographic_facet |
Arctic Greenland |
genre |
Arctic East Greenland Greenland narwhal* toothed whales |
genre_facet |
Arctic East Greenland Greenland narwhal* toothed whales |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.48550/arxiv.2101.01992 |
_version_ |
1766345433019318272 |