Filarioidea NanoClust Database ...
Construction of Filarial Worm and Apicomplexan Haemoparasite Databases for NanoCLUST: Within NCBI nucleotide the filarial worm COI gene Db was constructed using the search terms: (((((((((((cytochrome c oxidase subunit 1[Title]) OR cytochrome c oxidase subunit I) OR cytochrome oxidase subunit 1) OR...
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University of Melbourne
2023
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Online Access: | https://dx.doi.org/10.26188/22153730.v1 https://melbourne.figshare.com/articles/dataset/Filarioidea_NanoClust_Database/22153730/1 |
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ftdatacite:10.26188/22153730.v1 2023-05-15T15:50:11+02:00 Filarioidea NanoClust Database ... Huggins, Lucas 2023 https://dx.doi.org/10.26188/22153730.v1 https://melbourne.figshare.com/articles/dataset/Filarioidea_NanoClust_Database/22153730/1 unknown University of Melbourne https://dx.doi.org/10.26188/22153730 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Veterinary parasitology dataset Dataset 2023 ftdatacite https://doi.org/10.26188/22153730.v110.26188/22153730 2023-04-03T16:53:59Z Construction of Filarial Worm and Apicomplexan Haemoparasite Databases for NanoCLUST: Within NCBI nucleotide the filarial worm COI gene Db was constructed using the search terms: (((((((((((cytochrome c oxidase subunit 1[Title]) OR cytochrome c oxidase subunit I) OR cytochrome oxidase subunit 1) OR cytochrome oxidase subunit I) OR COX1) OR CO1) OR COI)) AND txid6295[Organism:exp])) AND 100:100000[Sequence Length]) And the NCBI accession NR_029255.1 ( Aliivibrio fischeri ) required for identification of our positive control. Additionally a second filarial worm Db was constructed from the same sequences downloaded using the aforementioned search terms with the inclusion of the dog genome GCF_014441545.1 ( Canis lupus familiaris ). For construction of the apicomplexan 18S rRNA gene Db the search terms used were: ((((((18S ribosomal RNA[Title]) OR 18S rRNA[Title]) OR ribosomal RNA[Title]) OR SSU rRNA[Title]) OR SSU ribosomal RNA[Title]) AND txid5794[Organism]) AND 200:10000[Sequence Length] Plus the addition of ... Dataset Canis lupus DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Veterinary parasitology |
spellingShingle |
Veterinary parasitology Huggins, Lucas Filarioidea NanoClust Database ... |
topic_facet |
Veterinary parasitology |
description |
Construction of Filarial Worm and Apicomplexan Haemoparasite Databases for NanoCLUST: Within NCBI nucleotide the filarial worm COI gene Db was constructed using the search terms: (((((((((((cytochrome c oxidase subunit 1[Title]) OR cytochrome c oxidase subunit I) OR cytochrome oxidase subunit 1) OR cytochrome oxidase subunit I) OR COX1) OR CO1) OR COI)) AND txid6295[Organism:exp])) AND 100:100000[Sequence Length]) And the NCBI accession NR_029255.1 ( Aliivibrio fischeri ) required for identification of our positive control. Additionally a second filarial worm Db was constructed from the same sequences downloaded using the aforementioned search terms with the inclusion of the dog genome GCF_014441545.1 ( Canis lupus familiaris ). For construction of the apicomplexan 18S rRNA gene Db the search terms used were: ((((((18S ribosomal RNA[Title]) OR 18S rRNA[Title]) OR ribosomal RNA[Title]) OR SSU rRNA[Title]) OR SSU ribosomal RNA[Title]) AND txid5794[Organism]) AND 200:10000[Sequence Length] Plus the addition of ... |
format |
Dataset |
author |
Huggins, Lucas |
author_facet |
Huggins, Lucas |
author_sort |
Huggins, Lucas |
title |
Filarioidea NanoClust Database ... |
title_short |
Filarioidea NanoClust Database ... |
title_full |
Filarioidea NanoClust Database ... |
title_fullStr |
Filarioidea NanoClust Database ... |
title_full_unstemmed |
Filarioidea NanoClust Database ... |
title_sort |
filarioidea nanoclust database ... |
publisher |
University of Melbourne |
publishDate |
2023 |
url |
https://dx.doi.org/10.26188/22153730.v1 https://melbourne.figshare.com/articles/dataset/Filarioidea_NanoClust_Database/22153730/1 |
genre |
Canis lupus |
genre_facet |
Canis lupus |
op_relation |
https://dx.doi.org/10.26188/22153730 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.26188/22153730.v110.26188/22153730 |
_version_ |
1766385167995240448 |