Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ...
This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cy...
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Online Access: | https://dx.doi.org/10.18710/vitgv3 https://dataverse.no/citation?persistentId=doi:10.18710/VITGV3 |
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ftdatacite:10.18710/vitgv3 2023-12-31T10:21:45+01:00 Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. 2022 https://dx.doi.org/10.18710/vitgv3 https://dataverse.no/citation?persistentId=doi:10.18710/VITGV3 unknown DataverseNO https://dx.doi.org/10.18710/vitgv3/zg1nos https://dx.doi.org/10.18710/vitgv3/mhakfd https://dx.doi.org/10.18710/vitgv3/gmmmhl https://dx.doi.org/10.18710/vitgv3/0dlnro https://dx.doi.org/10.18710/vitgv3/bf2fwt https://dx.doi.org/10.18710/vitgv3/to6dwr https://dx.doi.org/10.18710/vitgv3/goq6hf https://dx.doi.org/10.18710/vitgv3/9ikpan https://dx.doi.org/10.18710/vitgv3/sk6fci https://dx.doi.org/10.18710/vitgv3/slzqgh https://dx.doi.org/10.18710/vitgv3/gvhtzt Dataset dataset 2022 ftdatacite https://doi.org/10.18710/vitgv310.18710/vitgv3/zg1nos10.18710/vitgv3/mhakfd10.18710/vitgv3/gmmmhl10.18710/vitgv3/0dlnro10.18710/vitgv3/bf2fwt10.18710/vitgv3/to6dwr10.18710/vitgv3/goq6hf10.18710/vitgv3/9ikpan10.18710/vitgv3/sk6fci10.18710/vitgv3/slzqgh10.1 2023-12-01T10:25:59Z This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see "Download via URL" here: ... Dataset Orca DataCite Metadata Store (German National Library of Science and Technology) |
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Open Polar |
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DataCite Metadata Store (German National Library of Science and Technology) |
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description |
This dataset contains output files for a conformational search (CREST 2.8), optimized geometries, frequencies and Vibrational Circular Dichroism (VCD) properties (Gaussian 16 Rev. B.01) for the seven molecules cyclo(Ala-bAla-Ala-bAla), Cyclo(Ala-bAla-Pro-bAla), Cyclo(Pro-bAla-Pro-bAla), Cyclo(Boc-Cys-Pro-Gly-Cys-OMe), Cyclo(Boc-Cys-Pro-L-Leu-Cys-OMe), Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) and Cyclo(Phe-D-Pro-Gly-Arg-Gly-Asp). The conformational search is done with CREST while the rest is done with GAUSSIAN 16. For more information about the computational protocols used to generate the data, please see the journal article. For Cyclo(Boc-Cys-Pro-R-Leu-Cys-OMe) the geometry of the transition state between conformers is identified with a NEB-TS calculations using the ORCA 5.0 software, while the frequencies and energies are calculated with Gaussian 16 Rev. B.01. Some of the zip files are large and we recommend to download with URL, see "Download via URL" here: ... |
format |
Dataset |
author |
Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. |
spellingShingle |
Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... |
author_facet |
Eikås, Karolina Di Remigio Ruud, Kenneth Beerepoot, Maarten T. P. |
author_sort |
Eikås, Karolina Di Remigio |
title |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... |
title_short |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... |
title_full |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... |
title_fullStr |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... |
title_full_unstemmed |
Replication Data for: A Computational Protocol for VCD spectra of Cyclic Peptides ... |
title_sort |
replication data for: a computational protocol for vcd spectra of cyclic peptides ... |
publisher |
DataverseNO |
publishDate |
2022 |
url |
https://dx.doi.org/10.18710/vitgv3 https://dataverse.no/citation?persistentId=doi:10.18710/VITGV3 |
genre |
Orca |
genre_facet |
Orca |
op_relation |
https://dx.doi.org/10.18710/vitgv3/zg1nos https://dx.doi.org/10.18710/vitgv3/mhakfd https://dx.doi.org/10.18710/vitgv3/gmmmhl https://dx.doi.org/10.18710/vitgv3/0dlnro https://dx.doi.org/10.18710/vitgv3/bf2fwt https://dx.doi.org/10.18710/vitgv3/to6dwr https://dx.doi.org/10.18710/vitgv3/goq6hf https://dx.doi.org/10.18710/vitgv3/9ikpan https://dx.doi.org/10.18710/vitgv3/sk6fci https://dx.doi.org/10.18710/vitgv3/slzqgh https://dx.doi.org/10.18710/vitgv3/gvhtzt |
op_doi |
https://doi.org/10.18710/vitgv310.18710/vitgv3/zg1nos10.18710/vitgv3/mhakfd10.18710/vitgv3/gmmmhl10.18710/vitgv3/0dlnro10.18710/vitgv3/bf2fwt10.18710/vitgv3/to6dwr10.18710/vitgv3/goq6hf10.18710/vitgv3/9ikpan10.18710/vitgv3/sk6fci10.18710/vitgv3/slzqgh10.1 |
_version_ |
1786832663786553344 |