Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ...
Cultivated bivalves are important not only because of their economic value, but also due to their impacts on natural ecosystems. The Pacific oyster (Crassostrea gigas) is the world's most heavily cultivated shellfish species and has been introduced to all continents except Antarctica for aquacu...
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ftdatacite:10.17863/cam.43556 2024-02-27T08:33:36+00:00 Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... Vendrami, David LJ Houston, Ross D Gharbi, Karim Telesca, Luca Gutierrez, Alejandro P Gurney-Smith, Helen Hasegawa, Natsuki Boudry, Pierre Hoffman, Joseph I 2019 https://dx.doi.org/10.17863/cam.43556 https://www.repository.cam.ac.uk/handle/1810/296509 en eng Wiley open.access Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 http://purl.org/coar/access_right/c_abf2 Crassostrea gigas Pacific oyster aquaculture genetic structure high‐density genotyping array inbreeding restriction site‐associated DNA RAD sequencing single nucleotide polymorphism SNP article-journal ScholarlyArticle JournalArticle Article 2019 ftdatacite https://doi.org/10.17863/cam.43556 2024-02-01T14:53:49Z Cultivated bivalves are important not only because of their economic value, but also due to their impacts on natural ecosystems. The Pacific oyster (Crassostrea gigas) is the world's most heavily cultivated shellfish species and has been introduced to all continents except Antarctica for aquaculture. We therefore used a medium-density single nucleotide polymorphism (SNP) array to investigate the genetic structure of this species in Europe, where it was introduced during the 1960s and has since become a prolific invader of coastal ecosystems across the continent. We analyzed 21,499 polymorphic SNPs in 232 individuals from 23 localities spanning a latitudinal cline from Portugal to Norway and including the source populations of Japan and Canada. We confirmed the results of previous studies by finding clear support for a southern and a northern group, with the former being indistinguishable from the source populations indicating the absence of a pronounced founder effect. We furthermore conducted a large-scale ... Article in Journal/Newspaper Antarc* Antarctica Crassostrea gigas Pacific oyster DataCite Metadata Store (German National Library of Science and Technology) Canada Norway Pacific |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Crassostrea gigas Pacific oyster aquaculture genetic structure high‐density genotyping array inbreeding restriction site‐associated DNA RAD sequencing single nucleotide polymorphism SNP |
spellingShingle |
Crassostrea gigas Pacific oyster aquaculture genetic structure high‐density genotyping array inbreeding restriction site‐associated DNA RAD sequencing single nucleotide polymorphism SNP Vendrami, David LJ Houston, Ross D Gharbi, Karim Telesca, Luca Gutierrez, Alejandro P Gurney-Smith, Helen Hasegawa, Natsuki Boudry, Pierre Hoffman, Joseph I Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... |
topic_facet |
Crassostrea gigas Pacific oyster aquaculture genetic structure high‐density genotyping array inbreeding restriction site‐associated DNA RAD sequencing single nucleotide polymorphism SNP |
description |
Cultivated bivalves are important not only because of their economic value, but also due to their impacts on natural ecosystems. The Pacific oyster (Crassostrea gigas) is the world's most heavily cultivated shellfish species and has been introduced to all continents except Antarctica for aquaculture. We therefore used a medium-density single nucleotide polymorphism (SNP) array to investigate the genetic structure of this species in Europe, where it was introduced during the 1960s and has since become a prolific invader of coastal ecosystems across the continent. We analyzed 21,499 polymorphic SNPs in 232 individuals from 23 localities spanning a latitudinal cline from Portugal to Norway and including the source populations of Japan and Canada. We confirmed the results of previous studies by finding clear support for a southern and a northern group, with the former being indistinguishable from the source populations indicating the absence of a pronounced founder effect. We furthermore conducted a large-scale ... |
format |
Article in Journal/Newspaper |
author |
Vendrami, David LJ Houston, Ross D Gharbi, Karim Telesca, Luca Gutierrez, Alejandro P Gurney-Smith, Helen Hasegawa, Natsuki Boudry, Pierre Hoffman, Joseph I |
author_facet |
Vendrami, David LJ Houston, Ross D Gharbi, Karim Telesca, Luca Gutierrez, Alejandro P Gurney-Smith, Helen Hasegawa, Natsuki Boudry, Pierre Hoffman, Joseph I |
author_sort |
Vendrami, David LJ |
title |
Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... |
title_short |
Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... |
title_full |
Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... |
title_fullStr |
Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... |
title_full_unstemmed |
Detailed insights into pan-European population structure and inbreeding in wild and hatchery Pacific oysters (Crassostrea gigas) revealed by genome-wide SNP data. ... |
title_sort |
detailed insights into pan-european population structure and inbreeding in wild and hatchery pacific oysters (crassostrea gigas) revealed by genome-wide snp data. ... |
publisher |
Wiley |
publishDate |
2019 |
url |
https://dx.doi.org/10.17863/cam.43556 https://www.repository.cam.ac.uk/handle/1810/296509 |
geographic |
Canada Norway Pacific |
geographic_facet |
Canada Norway Pacific |
genre |
Antarc* Antarctica Crassostrea gigas Pacific oyster |
genre_facet |
Antarc* Antarctica Crassostrea gigas Pacific oyster |
op_rights |
open.access Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 http://purl.org/coar/access_right/c_abf2 |
op_doi |
https://doi.org/10.17863/cam.43556 |
_version_ |
1792046520491573248 |