An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ...
The interaction between an individual’s phenotype and its environment can provide insights into the origin and extent of local adaptation. Understanding how an individual may adapt and match its phenotype to a particular environment is therefore a key objective of molecular ecology. Here, we will us...
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Online Access: | https://dx.doi.org/10.17605/osf.io/vekqg https://osf.io/vekqg/ |
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ftdatacite:10.17605/osf.io/vekqg 2024-09-09T19:05:06+00:00 An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... Hoffman, Joe Stainfield, Claire Fox-Clarke, Cameron Nagel, Rebecca Toscani, Camille Forcada, Jaume 2020 https://dx.doi.org/10.17605/osf.io/vekqg https://osf.io/vekqg/ unknown OSF Registries https://archive.org/details/osf-registrations-vekqg-v1 https://osf.io/je4sb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Marine Biology Population Biology Life Sciences Ecology and Evolutionary Biology Biology Animal Sciences article StudyRegistration CreativeWork Pre-registration 2020 ftdatacite https://doi.org/10.17605/osf.io/vekqg 2024-08-01T10:00:21Z The interaction between an individual’s phenotype and its environment can provide insights into the origin and extent of local adaptation. Understanding how an individual may adapt and match its phenotype to a particular environment is therefore a key objective of molecular ecology. Here, we will use an RNA-sequencing approach to compare the blood mRNA levels of Antarctic fur seals from two colonies of contrasting population density (low and high) at two seasonal time points (shortly after birth and shortly before weaning). Samples were collected from mother-pup pairs during two subsequent breeding seasons (2018-19 and 2019-20) on the sub-Antarctic island of Bird Island, South Georgia. This is an exploratory study to better understand (a) how gene expression profiles differ among individuals experiencing low and high density conditions, (b) how gene expression profiles change throughout the season (from birth to weaning), (c) how gene expression profiles reflect differing pressures on mothers and pups, and ... Article in Journal/Newspaper Antarc* Antarctic Antarctic Fur Seal Antarctic Fur Seals Bird Island DataCite Antarctic Bird Island ENVELOPE(-38.060,-38.060,-54.004,-54.004) |
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topic |
Marine Biology Population Biology Life Sciences Ecology and Evolutionary Biology Biology Animal Sciences |
spellingShingle |
Marine Biology Population Biology Life Sciences Ecology and Evolutionary Biology Biology Animal Sciences Hoffman, Joe Stainfield, Claire Fox-Clarke, Cameron Nagel, Rebecca Toscani, Camille Forcada, Jaume An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
topic_facet |
Marine Biology Population Biology Life Sciences Ecology and Evolutionary Biology Biology Animal Sciences |
description |
The interaction between an individual’s phenotype and its environment can provide insights into the origin and extent of local adaptation. Understanding how an individual may adapt and match its phenotype to a particular environment is therefore a key objective of molecular ecology. Here, we will use an RNA-sequencing approach to compare the blood mRNA levels of Antarctic fur seals from two colonies of contrasting population density (low and high) at two seasonal time points (shortly after birth and shortly before weaning). Samples were collected from mother-pup pairs during two subsequent breeding seasons (2018-19 and 2019-20) on the sub-Antarctic island of Bird Island, South Georgia. This is an exploratory study to better understand (a) how gene expression profiles differ among individuals experiencing low and high density conditions, (b) how gene expression profiles change throughout the season (from birth to weaning), (c) how gene expression profiles reflect differing pressures on mothers and pups, and ... |
format |
Article in Journal/Newspaper |
author |
Hoffman, Joe Stainfield, Claire Fox-Clarke, Cameron Nagel, Rebecca Toscani, Camille Forcada, Jaume |
author_facet |
Hoffman, Joe Stainfield, Claire Fox-Clarke, Cameron Nagel, Rebecca Toscani, Camille Forcada, Jaume |
author_sort |
Hoffman, Joe |
title |
An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
title_short |
An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
title_full |
An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
title_fullStr |
An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
title_full_unstemmed |
An explorative RNA-seq analysis of Antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
title_sort |
explorative rna-seq analysis of antarctic fur seal mother-pup pairs from low and high density breeding populations ... |
publisher |
OSF Registries |
publishDate |
2020 |
url |
https://dx.doi.org/10.17605/osf.io/vekqg https://osf.io/vekqg/ |
long_lat |
ENVELOPE(-38.060,-38.060,-54.004,-54.004) |
geographic |
Antarctic Bird Island |
geographic_facet |
Antarctic Bird Island |
genre |
Antarc* Antarctic Antarctic Fur Seal Antarctic Fur Seals Bird Island |
genre_facet |
Antarc* Antarctic Antarctic Fur Seal Antarctic Fur Seals Bird Island |
op_relation |
https://archive.org/details/osf-registrations-vekqg-v1 https://osf.io/je4sb |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.17605/osf.io/vekqg |
_version_ |
1809819084548734976 |