7. Ecological genomics of the Northern krill: Genome-scale comparisons of adaptive divergence ...

• Main Authors: Wallberg, Andreas, Unneberg, Per
• Format: Dataset
• Language: unknown
• Published: SciLifeLab 2024
• Subjects: Biological adaptation; Evolutionary ecology; Genomics; North Atlantic; Northern krill
• Online Access: https://dx.doi.org/10.17044/scilifelab.22817410.v1; https://figshare.scilifelab.se/articles/dataset/7_Ecological_genomics_of_the_Northern_krill_Genome-scale_comparisons_of_adaptive_divergence/22817410/1

This item holds multiple tar archives with genome-scale comparisons of divergence between Northern krill populations, including estimated allele-frequencies and divergence (e.g. F ST ) , and extended haplotype signatures (XP-nSL estimates). Many analyses were performed in "chunks" (160 in total across both gene-rich and gene-poor sequences), which are described in a previous item. Population definitions Population definitions are the same as desribed in a different item: "at vs. me" = Atlantic Ocean samples (n=67) vs. the Mediterranean (i.e. Barcelona) samples (n=7). "we vs. ea" = South-West North Atlantic Ocean (n=20) vs. North-East North Atlantic Ocean (n=47). In files using this contrast, sometimes the label "wa" is used instead of "we" for the South-West North Atlantic Ocean samples. Contents: allele_freqs_fst.gene_rich_sequences.at_vs_me.tar, contains per-SNP estimates of allele frequencies and F ST between "at" and "me" groups along gene-rich sequences. ...