Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ...
We examined gene expression responses of >2-year coral transplant experiment to ambient and low pH common garden sites of three species of reef-building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities (Symbiodiniaceae) originating from...
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Online Access: | https://dx.doi.org/10.1594/pangaea.966769 https://doi.pangaea.de/10.1594/PANGAEA.966769 |
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ftdatacite:10.1594/pangaea.966769 2024-06-09T07:48:18+00:00 Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J 2024 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.966769 https://doi.pangaea.de/10.1594/PANGAEA.966769 unknown PANGAEA https://CRAN.R-project.org/package=seacarb https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA865460 https://dx.doi.org/10.1111/mec.17186 https://dx.doi.org/10.1594/pangaea.913183 https://CRAN.R-project.org/package=seacarb https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA865460 Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Benthos Biomass/Abundance/Elemental composition Calcification/Dissolution Cnidaria Coast and continental shelf Field experiment Gene expression incl. proteomics Growth/Morphology North Atlantic Porites astreoides Porites porites Siderastrea siderea Single species Tropical Event label Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Site Replicates Linear extension Linear extension, standard error Density Density, standard error Symbiont cell density Symbiont cell density, standard error Chlorophyll a Chlorophyll a, standard error Chlorophyll a per cell Proteins Proteins, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error pH pH, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Dataset dataset 2024 ftdatacite https://doi.org/10.1594/pangaea.96676910.1111/mec.1718610.1594/pangaea.913183 2024-05-13T12:44:21Z We examined gene expression responses of >2-year coral transplant experiment to ambient and low pH common garden sites of three species of reef-building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities (Symbiodiniaceae) originating from low pH (Ojo) and ambient pH native origins (Lagoon or Reef). ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-03-06. ... Dataset North Atlantic Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
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Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
unknown |
topic |
Animalia Benthic animals Benthos Biomass/Abundance/Elemental composition Calcification/Dissolution Cnidaria Coast and continental shelf Field experiment Gene expression incl. proteomics Growth/Morphology North Atlantic Porites astreoides Porites porites Siderastrea siderea Single species Tropical Event label Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Site Replicates Linear extension Linear extension, standard error Density Density, standard error Symbiont cell density Symbiont cell density, standard error Chlorophyll a Chlorophyll a, standard error Chlorophyll a per cell Proteins Proteins, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error pH pH, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air |
spellingShingle |
Animalia Benthic animals Benthos Biomass/Abundance/Elemental composition Calcification/Dissolution Cnidaria Coast and continental shelf Field experiment Gene expression incl. proteomics Growth/Morphology North Atlantic Porites astreoides Porites porites Siderastrea siderea Single species Tropical Event label Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Site Replicates Linear extension Linear extension, standard error Density Density, standard error Symbiont cell density Symbiont cell density, standard error Chlorophyll a Chlorophyll a, standard error Chlorophyll a per cell Proteins Proteins, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error pH pH, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
topic_facet |
Animalia Benthic animals Benthos Biomass/Abundance/Elemental composition Calcification/Dissolution Cnidaria Coast and continental shelf Field experiment Gene expression incl. proteomics Growth/Morphology North Atlantic Porites astreoides Porites porites Siderastrea siderea Single species Tropical Event label Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Site Replicates Linear extension Linear extension, standard error Density Density, standard error Symbiont cell density Symbiont cell density, standard error Chlorophyll a Chlorophyll a, standard error Chlorophyll a per cell Proteins Proteins, standard error Alkalinity, total Alkalinity, total, standard error Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard error pH pH, standard error Aragonite saturation state Aragonite saturation state, standard error Temperature, water Temperature, water, standard error Salinity Salinity, standard error Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air |
description |
We examined gene expression responses of >2-year coral transplant experiment to ambient and low pH common garden sites of three species of reef-building corals (Porites astreoides, Porites porites and Siderastrea siderea) and their algal endosymbiont communities (Symbiodiniaceae) originating from low pH (Ojo) and ambient pH native origins (Lagoon or Reef). ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2019) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2020-03-06. ... |
format |
Dataset |
author |
Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J |
author_facet |
Radice, Veronica Z Martinez, Ana Paytan, Adina Potts, Donald C Barshis, Daniel J |
author_sort |
Radice, Veronica Z |
title |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
title_short |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
title_full |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
title_fullStr |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
title_full_unstemmed |
Seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
title_sort |
seawater carbonate chemistry and physiological metrics and gene expression responses of transplants of three species of reef-building corals ... |
publisher |
PANGAEA |
publishDate |
2024 |
url |
https://dx.doi.org/10.1594/pangaea.966769 https://doi.pangaea.de/10.1594/PANGAEA.966769 |
genre |
North Atlantic Ocean acidification |
genre_facet |
North Atlantic Ocean acidification |
op_relation |
https://CRAN.R-project.org/package=seacarb https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA865460 https://dx.doi.org/10.1111/mec.17186 https://dx.doi.org/10.1594/pangaea.913183 https://CRAN.R-project.org/package=seacarb https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA865460 |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.96676910.1111/mec.1718610.1594/pangaea.913183 |
_version_ |
1801379973211095040 |