Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...

We deciphered the reaction norms of two oyster species living in contrasting habitats: the intertidal oyster Crassostrea gigas and the subtidal flat oyster Ostrea edulis, which are two economically and ecologically valuable species in temperate ecosystems. Six-month-old oysters of each species were...

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Main Authors: Caillon, Coline, Pernet, Fabrice, Lutier, Mathieu, Di Poi, Carole
Format: Dataset
Language:unknown
Published: PANGAEA 2024
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.965884
https://doi.pangaea.de/10.1594/PANGAEA.965884
id ftdatacite:10.1594/pangaea.965884
record_format openpolar
spelling ftdatacite:10.1594/pangaea.965884 2024-09-09T19:37:27+00:00 Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ... Caillon, Coline Pernet, Fabrice Lutier, Mathieu Di Poi, Carole 2024 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.965884 https://doi.pangaea.de/10.1594/PANGAEA.965884 unknown PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1242/jeb.246432 https://dx.doi.org/10.17882/95793 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Behaviour Benthic animals Benthos Coast and continental shelf Containers and aquaria 20-1000 L or < 1 m**2 Crassostrea gigas Growth/Morphology Laboratory experiment Mollusca Mortality/Survival North Atlantic Ostrea edulis Other studied parameter or process Single species Temperate Type of study Figure Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Identification Treatment pH pH Day of experiment Code Shell length Mass Shell, mass Wet mass Growth rate Gray level Fatty acid, common name Fatty acids Cell biovolume Ratio Carbohydrates, per dry mass Proteins, total pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation Oxygen, dissolved Oxygen, dissolved, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbon, inorganic, dissolved dataset Dataset 2024 ftdatacite https://doi.org/10.1594/pangaea.96588410.1242/jeb.24643210.17882/95793 2024-06-17T10:25:11Z We deciphered the reaction norms of two oyster species living in contrasting habitats: the intertidal oyster Crassostrea gigas and the subtidal flat oyster Ostrea edulis, which are two economically and ecologically valuable species in temperate ecosystems. Six-month-old oysters of each species were exposed in common garden tanks for 48 days to a pH gradient ranging from 7.7 to 6.4 (total scale). The database contains data from: 1. seawater physico-chemical parameters during the acclimation period, 2. oyster survival during the acclimation period, 3. biometrics of oyster species, 4. shell coloration of oyster species, 5. composition of the membrane fatty acids of oyster species, 6. temporal evolution of the phytoplankton cell volume, 7. fatty acid composition of phytoplankton, 8. energy reserves of oyster species. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-02-26. ... Dataset Crassostrea gigas North Atlantic Ocean acidification DataCite
institution Open Polar
collection DataCite
op_collection_id ftdatacite
language unknown
topic Animalia
Behaviour
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea gigas
Growth/Morphology
Laboratory experiment
Mollusca
Mortality/Survival
North Atlantic
Ostrea edulis
Other studied parameter or process
Single species
Temperate
Type of study
Figure
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Identification
Treatment pH
pH
Day of experiment
Code
Shell length
Mass
Shell, mass
Wet mass
Growth rate
Gray level
Fatty acid, common name
Fatty acids
Cell biovolume
Ratio
Carbohydrates, per dry mass
Proteins, total
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
Oxygen, dissolved
Oxygen, dissolved, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
spellingShingle Animalia
Behaviour
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea gigas
Growth/Morphology
Laboratory experiment
Mollusca
Mortality/Survival
North Atlantic
Ostrea edulis
Other studied parameter or process
Single species
Temperate
Type of study
Figure
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Identification
Treatment pH
pH
Day of experiment
Code
Shell length
Mass
Shell, mass
Wet mass
Growth rate
Gray level
Fatty acid, common name
Fatty acids
Cell biovolume
Ratio
Carbohydrates, per dry mass
Proteins, total
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
Oxygen, dissolved
Oxygen, dissolved, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
Caillon, Coline
Pernet, Fabrice
Lutier, Mathieu
Di Poi, Carole
Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
topic_facet Animalia
Behaviour
Benthic animals
Benthos
Coast and continental shelf
Containers and aquaria 20-1000 L or < 1 m**2
Crassostrea gigas
Growth/Morphology
Laboratory experiment
Mollusca
Mortality/Survival
North Atlantic
Ostrea edulis
Other studied parameter or process
Single species
Temperate
Type of study
Figure
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Identification
Treatment pH
pH
Day of experiment
Code
Shell length
Mass
Shell, mass
Wet mass
Growth rate
Gray level
Fatty acid, common name
Fatty acids
Cell biovolume
Ratio
Carbohydrates, per dry mass
Proteins, total
pH, standard deviation
Alkalinity, total
Alkalinity, total, standard deviation
Temperature, water
Temperature, water, standard deviation
Salinity
Salinity, standard deviation
Oxygen, dissolved
Oxygen, dissolved, standard deviation
Partial pressure of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide, standard deviation
Carbon, inorganic, dissolved
description We deciphered the reaction norms of two oyster species living in contrasting habitats: the intertidal oyster Crassostrea gigas and the subtidal flat oyster Ostrea edulis, which are two economically and ecologically valuable species in temperate ecosystems. Six-month-old oysters of each species were exposed in common garden tanks for 48 days to a pH gradient ranging from 7.7 to 6.4 (total scale). The database contains data from: 1. seawater physico-chemical parameters during the acclimation period, 2. oyster survival during the acclimation period, 3. biometrics of oyster species, 4. shell coloration of oyster species, 5. composition of the membrane fatty acids of oyster species, 6. temporal evolution of the phytoplankton cell volume, 7. fatty acid composition of phytoplankton, 8. energy reserves of oyster species. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2024) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-02-26. ...
format Dataset
author Caillon, Coline
Pernet, Fabrice
Lutier, Mathieu
Di Poi, Carole
author_facet Caillon, Coline
Pernet, Fabrice
Lutier, Mathieu
Di Poi, Carole
author_sort Caillon, Coline
title Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
title_short Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
title_full Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
title_fullStr Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
title_full_unstemmed Seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
title_sort seawater carbonate chemistry and reaction norms of two oyster species living in contrasting habitats ...
publisher PANGAEA
publishDate 2024
url https://dx.doi.org/10.1594/pangaea.965884
https://doi.pangaea.de/10.1594/PANGAEA.965884
genre Crassostrea gigas
North Atlantic
Ocean acidification
genre_facet Crassostrea gigas
North Atlantic
Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1242/jeb.246432
https://dx.doi.org/10.17882/95793
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.96588410.1242/jeb.24643210.17882/95793
_version_ 1809906610106007552