Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...

Roller table experiments with Thalassiosira pseudonana, a small centric diatom, were conducted to produce marine snow aggregates in six treatments: Control (pCO2 = 400 ppm), OA (pCO2 = 750 ppm), water accommodated fraction of oil (WAF), OAWAF, diluted chemically enhanced WAF (DCEWAF), and OADCEWAF....

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Bibliographic Details
Main Authors: Genzer, Jennifer L, Kamalanathan, Manoj, Bretherton, Laura, Hillhouse, Jessica, Xu, Chen, Santschi, Peter H, Quigg, Antonietta
Format: Dataset
Language:unknown
Published: PANGAEA 2024
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.965883
https://doi.pangaea.de/10.1594/PANGAEA.965883
id ftdatacite:10.1594/pangaea.965883
record_format openpolar
spelling ftdatacite:10.1594/pangaea.965883 2024-04-28T08:35:00+00:00 Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ... Genzer, Jennifer L Kamalanathan, Manoj Bretherton, Laura Hillhouse, Jessica Xu, Chen Santschi, Peter H Quigg, Antonietta 2024 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.965883 https://doi.pangaea.de/10.1594/PANGAEA.965883 unknown PANGAEA https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.1371/journal.pone.0235473 https://dx.doi.org/10.7266/vf86swmx https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Bacillariophyta Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Chromista Laboratory experiment Laboratory strains Not applicable Organic toxins Other studied parameter or process Pelagos Phytoplankton Primary production/Photosynthesis Single species Thalassiosira pseudonana Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Time point, descriptive Growth phase Treatment Relative fluorescence intensity, ratio Effective absorbance cross-section of photosystem II Connectivity between photosystem II Chlorophyll a Cell density Carbohydrates mass Proteins Transparent exopolymer particles as Gum Xanthan equivalents per volume Polycyclic aromatic hydrocarbons Polycyclic aromatic hydrocarbons, mass Equivalent spherical diameter Oil equivalent pH Alkalinity, total Partial pressure of carbon dioxide water at sea surface temperature wet air Carbon, inorganic, dissolved Bicarbonate ion Carbonate ion Carbon dioxide Area Counts Optical density Aspect ratio Settling time Salinity Temperature, water Temperature, water, standard deviation Carbonate system computation flag Fugacity of carbon dioxide water at sea surface temperature wet air dataset Dataset 2024 ftdatacite https://doi.org/10.1594/pangaea.96588310.1371/journal.pone.023547310.7266/vf86swmx 2024-04-02T12:34:59Z Roller table experiments with Thalassiosira pseudonana, a small centric diatom, were conducted to produce marine snow aggregates in six treatments: Control (pCO2 = 400 ppm), OA (pCO2 = 750 ppm), water accommodated fraction of oil (WAF), OAWAF, diluted chemically enhanced WAF (DCEWAF), and OADCEWAF. Measurements included intracellular photophysiological responses, oil concentrations and polycyclic aromatic hydrocarbons (PAHs), aggregate morphology, transparent exopolymeric particles (TEP), and extracellular polymeric substances (EPS) to investigate if OA will affect the response to oil spill conditions. The experiments were conducted in the dark to eliminate cell replication and photosynthesis and used both stationary and exponential growth phases. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-01-26. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language unknown
topic Bacillariophyta
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Laboratory experiment
Laboratory strains
Not applicable
Organic toxins
Other studied parameter or process
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Thalassiosira pseudonana
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time point, descriptive
Growth phase
Treatment
Relative fluorescence intensity, ratio
Effective absorbance cross-section of photosystem II
Connectivity between photosystem II
Chlorophyll a
Cell density
Carbohydrates mass
Proteins
Transparent exopolymer particles as Gum Xanthan equivalents per volume
Polycyclic aromatic hydrocarbons
Polycyclic aromatic hydrocarbons, mass
Equivalent spherical diameter
Oil equivalent
pH
Alkalinity, total
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Bicarbonate ion
Carbonate ion
Carbon dioxide
Area
Counts
Optical density
Aspect ratio
Settling time
Salinity
Temperature, water
Temperature, water, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
spellingShingle Bacillariophyta
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Laboratory experiment
Laboratory strains
Not applicable
Organic toxins
Other studied parameter or process
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Thalassiosira pseudonana
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time point, descriptive
Growth phase
Treatment
Relative fluorescence intensity, ratio
Effective absorbance cross-section of photosystem II
Connectivity between photosystem II
Chlorophyll a
Cell density
Carbohydrates mass
Proteins
Transparent exopolymer particles as Gum Xanthan equivalents per volume
Polycyclic aromatic hydrocarbons
Polycyclic aromatic hydrocarbons, mass
Equivalent spherical diameter
Oil equivalent
pH
Alkalinity, total
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Bicarbonate ion
Carbonate ion
Carbon dioxide
Area
Counts
Optical density
Aspect ratio
Settling time
Salinity
Temperature, water
Temperature, water, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
Genzer, Jennifer L
Kamalanathan, Manoj
Bretherton, Laura
Hillhouse, Jessica
Xu, Chen
Santschi, Peter H
Quigg, Antonietta
Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
topic_facet Bacillariophyta
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Chromista
Laboratory experiment
Laboratory strains
Not applicable
Organic toxins
Other studied parameter or process
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Thalassiosira pseudonana
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Time point, descriptive
Growth phase
Treatment
Relative fluorescence intensity, ratio
Effective absorbance cross-section of photosystem II
Connectivity between photosystem II
Chlorophyll a
Cell density
Carbohydrates mass
Proteins
Transparent exopolymer particles as Gum Xanthan equivalents per volume
Polycyclic aromatic hydrocarbons
Polycyclic aromatic hydrocarbons, mass
Equivalent spherical diameter
Oil equivalent
pH
Alkalinity, total
Partial pressure of carbon dioxide water at sea surface temperature wet air
Carbon, inorganic, dissolved
Bicarbonate ion
Carbonate ion
Carbon dioxide
Area
Counts
Optical density
Aspect ratio
Settling time
Salinity
Temperature, water
Temperature, water, standard deviation
Carbonate system computation flag
Fugacity of carbon dioxide water at sea surface temperature wet air
description Roller table experiments with Thalassiosira pseudonana, a small centric diatom, were conducted to produce marine snow aggregates in six treatments: Control (pCO2 = 400 ppm), OA (pCO2 = 750 ppm), water accommodated fraction of oil (WAF), OAWAF, diluted chemically enhanced WAF (DCEWAF), and OADCEWAF. Measurements included intracellular photophysiological responses, oil concentrations and polycyclic aromatic hydrocarbons (PAHs), aggregate morphology, transparent exopolymeric particles (TEP), and extracellular polymeric substances (EPS) to investigate if OA will affect the response to oil spill conditions. The experiments were conducted in the dark to eliminate cell replication and photosynthesis and used both stationary and exponential growth phases. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-01-26. ...
format Dataset
author Genzer, Jennifer L
Kamalanathan, Manoj
Bretherton, Laura
Hillhouse, Jessica
Xu, Chen
Santschi, Peter H
Quigg, Antonietta
author_facet Genzer, Jennifer L
Kamalanathan, Manoj
Bretherton, Laura
Hillhouse, Jessica
Xu, Chen
Santschi, Peter H
Quigg, Antonietta
author_sort Genzer, Jennifer L
title Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
title_short Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
title_full Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
title_fullStr Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
title_full_unstemmed Seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
title_sort seawater carbonate chemistry and diatom aggregation when exposed to crude oil and chemical dispersant ...
publisher PANGAEA
publishDate 2024
url https://dx.doi.org/10.1594/pangaea.965883
https://doi.pangaea.de/10.1594/PANGAEA.965883
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.1371/journal.pone.0235473
https://dx.doi.org/10.7266/vf86swmx
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.96588310.1371/journal.pone.023547310.7266/vf86swmx
_version_ 1797591489712226304