Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...

We carried out a manipulative aquarium experiment for 21 days to study the response of the widespread pulsating soft coral Xenia umbellata to simulated OA conditions. We gradually decreased the pH from ambient (~8.3) to three consecutive 7-day long pH treatments of 8.0, 7.8, and 7.6, using a CO2 dos...

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Main Authors: Tilstra, Arjen, Braxator, Lorena, Thobor, Bianca, Mezger, Selma D, Hill, Claudia E L, El-Khaled, Yusuf C, Caporale, Giulia, Kim, Sohyoung, Wild, Christian
Format: Dataset
Language:English
Published: PANGAEA 2024
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.964548
https://doi.pangaea.de/10.1594/PANGAEA.964548
id ftdatacite:10.1594/pangaea.964548
record_format openpolar
spelling ftdatacite:10.1594/pangaea.964548 2024-04-28T08:34:58+00:00 Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ... Tilstra, Arjen Braxator, Lorena Thobor, Bianca Mezger, Selma D Hill, Claudia E L El-Khaled, Yusuf C Caporale, Giulia Kim, Sohyoung Wild, Christian 2024 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.964548 https://doi.pangaea.de/10.1594/PANGAEA.964548 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.1371/journal.pone.0294470 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Benthic animals Biomass/Abundance/Elemental composition Cnidaria Containers and aquaria 20-1000 L or < 1 m**2 Growth/Morphology Laboratory experiment Laboratory strains Not applicable Other studied parameter or process Primary production/Photosynthesis Respiration Single species Xenia umbellata Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Identification Day of experiment Replicate Pulsation rate Polyp number Pixel value Respiration rate, oxygen Net photosynthesis rate, oxygen Gross photosynthesis rate, oxygen Symbiont cell density Cell density Chlorophyll a per cell δ15N δ13C Nitrogen Carbon Carbon/Nitrogen ratio Treatment Ammonium Nitrate Nitrite Phosphate Carbonate hardness of water Alkalinity, total Magnesium Calcium Temperature, water Salinity pH Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air dataset Dataset 2024 ftdatacite https://doi.org/10.1594/pangaea.96454810.1371/journal.pone.0294470 2024-04-02T11:36:31Z We carried out a manipulative aquarium experiment for 21 days to study the response of the widespread pulsating soft coral Xenia umbellata to simulated OA conditions. We gradually decreased the pH from ambient (~8.3) to three consecutive 7-day long pH treatments of 8.0, 7.8, and 7.6, using a CO2 dosing system. Monitored response variables included pulsation rate, specific growth rate, visual coloration, survival, Symbiodiniaceae cell densities and chlorophyll a content, photosynthesis and respiration, and finally stable isotopes of carbon (C) and nitrogen (N) as well as CN content. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-01-03. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Animalia
Benthic animals
Biomass/Abundance/Elemental composition
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Other studied parameter or process
Primary production/Photosynthesis
Respiration
Single species
Xenia umbellata
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Identification
Day of experiment
Replicate
Pulsation rate
Polyp number
Pixel value
Respiration rate, oxygen
Net photosynthesis rate, oxygen
Gross photosynthesis rate, oxygen
Symbiont cell density
Cell density
Chlorophyll a per cell
δ15N
δ13C
Nitrogen
Carbon
Carbon/Nitrogen ratio
Treatment
Ammonium
Nitrate
Nitrite
Phosphate
Carbonate hardness of water
Alkalinity, total
Magnesium
Calcium
Temperature, water
Salinity
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
spellingShingle Animalia
Benthic animals
Biomass/Abundance/Elemental composition
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Other studied parameter or process
Primary production/Photosynthesis
Respiration
Single species
Xenia umbellata
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Identification
Day of experiment
Replicate
Pulsation rate
Polyp number
Pixel value
Respiration rate, oxygen
Net photosynthesis rate, oxygen
Gross photosynthesis rate, oxygen
Symbiont cell density
Cell density
Chlorophyll a per cell
δ15N
δ13C
Nitrogen
Carbon
Carbon/Nitrogen ratio
Treatment
Ammonium
Nitrate
Nitrite
Phosphate
Carbonate hardness of water
Alkalinity, total
Magnesium
Calcium
Temperature, water
Salinity
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Tilstra, Arjen
Braxator, Lorena
Thobor, Bianca
Mezger, Selma D
Hill, Claudia E L
El-Khaled, Yusuf C
Caporale, Giulia
Kim, Sohyoung
Wild, Christian
Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...
topic_facet Animalia
Benthic animals
Biomass/Abundance/Elemental composition
Cnidaria
Containers and aquaria 20-1000 L or < 1 m**2
Growth/Morphology
Laboratory experiment
Laboratory strains
Not applicable
Other studied parameter or process
Primary production/Photosynthesis
Respiration
Single species
Xenia umbellata
Type of study
Species, unique identification
Species, unique identification URI
Species, unique identification Semantic URI
Identification
Day of experiment
Replicate
Pulsation rate
Polyp number
Pixel value
Respiration rate, oxygen
Net photosynthesis rate, oxygen
Gross photosynthesis rate, oxygen
Symbiont cell density
Cell density
Chlorophyll a per cell
δ15N
δ13C
Nitrogen
Carbon
Carbon/Nitrogen ratio
Treatment
Ammonium
Nitrate
Nitrite
Phosphate
Carbonate hardness of water
Alkalinity, total
Magnesium
Calcium
Temperature, water
Salinity
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
description We carried out a manipulative aquarium experiment for 21 days to study the response of the widespread pulsating soft coral Xenia umbellata to simulated OA conditions. We gradually decreased the pH from ambient (~8.3) to three consecutive 7-day long pH treatments of 8.0, 7.8, and 7.6, using a CO2 dosing system. Monitored response variables included pulsation rate, specific growth rate, visual coloration, survival, Symbiodiniaceae cell densities and chlorophyll a content, photosynthesis and respiration, and finally stable isotopes of carbon (C) and nitrogen (N) as well as CN content. ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2024-01-03. ...
format Dataset
author Tilstra, Arjen
Braxator, Lorena
Thobor, Bianca
Mezger, Selma D
Hill, Claudia E L
El-Khaled, Yusuf C
Caporale, Giulia
Kim, Sohyoung
Wild, Christian
author_facet Tilstra, Arjen
Braxator, Lorena
Thobor, Bianca
Mezger, Selma D
Hill, Claudia E L
El-Khaled, Yusuf C
Caporale, Giulia
Kim, Sohyoung
Wild, Christian
author_sort Tilstra, Arjen
title Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...
title_short Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...
title_full Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...
title_fullStr Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...
title_full_unstemmed Seawater carbonate chemistry and pulsation and growth of the widespread soft coral Xenia umbellata ...
title_sort seawater carbonate chemistry and pulsation and growth of the widespread soft coral xenia umbellata ...
publisher PANGAEA
publishDate 2024
url https://dx.doi.org/10.1594/pangaea.964548
https://doi.pangaea.de/10.1594/PANGAEA.964548
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://cran.r-project.org/web/packages/seacarb/index.html
https://dx.doi.org/10.1371/journal.pone.0294470
https://cran.r-project.org/web/packages/seacarb/index.html
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.96454810.1371/journal.pone.0294470
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