Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...

The marine picocyanobacterium Synechococcus accounts for a major fraction of the primary production across the global oceans. However, knowledge of the responses of Synechococcus to changing pCO2 and light levels has been scarcely documented. Hence, we grew Synechococcus sp. CB0101 at two CO2 concen...

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Main Authors: Li, He, Beardall, John, Gao, Kunshan
Format: Dataset
Language:English
Published: PANGAEA 2023
Subjects:
pH
Online Access:https://dx.doi.org/10.1594/pangaea.961006
https://doi.pangaea.de/10.1594/PANGAEA.961006
id ftdatacite:10.1594/pangaea.961006
record_format openpolar
spelling ftdatacite:10.1594/pangaea.961006 2024-04-28T08:34:51+00:00 Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ... Li, He Beardall, John Gao, Kunshan 2023 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.961006 https://doi.pangaea.de/10.1594/PANGAEA.961006 en eng PANGAEA https://CRAN.R-project.org/package=seacarb https://dx.doi.org/10.3390/w15061228 https://CRAN.R-project.org/package=seacarb Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Bacteria Biomass/Abundance/Elemental composition Bottles or small containers/Aquaria <20 L Cyanobacteria Growth/Morphology Laboratory experiment Laboratory strains Light Not applicable Pelagos Phytoplankton Primary production/Photosynthesis Single species Synechococcus sp. Type of study Species Treatment Replicate Irradiance Growth rate Chlorophyll a per cell Photosynthetic carbon fixation rate per cell Photosynthetic carbon fixation rate, per chlorophyll a Effective quantum yield Photosynthetic quantum efficiency Maximal electron transport rate, relative Functional absorption cross sections of photosystem II reaction centers Contribution Ratio Particulate organic carbon, per cell Particulate organic nitrogen per cell Carbon/Nitrogen ratio Salinity Temperature, water Alkalinity, total pH Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide water at sea surface temperature wet air Bicarbonate ion Carbonate ion Carbon, inorganic, dissolved Aragonite saturation state Calcite saturation state Calculated using seacarb after Nisumaa et al. 2010 Ocean Acidification International Coordination Centre OA-ICC dataset Dataset 2023 ftdatacite https://doi.org/10.1594/pangaea.96100610.3390/w15061228 2024-04-02T11:36:31Z The marine picocyanobacterium Synechococcus accounts for a major fraction of the primary production across the global oceans. However, knowledge of the responses of Synechococcus to changing pCO2 and light levels has been scarcely documented. Hence, we grew Synechococcus sp. CB0101 at two CO2 concentrations (ambient CO2 AC:410 μatm; high CO2 HC:1000 μatm) under various light levels between 25 and 800 μmol photons m−2 s−1 for 10–20 generations and found that the growth of Synechococcus strain CB0101 is strongly influenced by light intensity, peaking at 250 μmol m−2 s−1 and thereafter declined at higher light levels. Synechococcus cells showed a range of acclimation in their photophysiological characteristics, including changes in pigment content, optical absorption cross section, and light harvesting efficiency. Elevated pCO2 inhibited the growth of cells at light intensities close to or greater than saturation, with inhibition being greater under high light. Elevated pCO2 also reduced photosynthetic carbon ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-07-19. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology)
institution Open Polar
collection DataCite Metadata Store (German National Library of Science and Technology)
op_collection_id ftdatacite
language English
topic Bacteria
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Synechococcus sp.
Type of study
Species
Treatment
Replicate
Irradiance
Growth rate
Chlorophyll a per cell
Photosynthetic carbon fixation rate per cell
Photosynthetic carbon fixation rate, per chlorophyll a
Effective quantum yield
Photosynthetic quantum efficiency
Maximal electron transport rate, relative
Functional absorption cross sections of photosystem II reaction centers
Contribution
Ratio
Particulate organic carbon, per cell
Particulate organic nitrogen per cell
Carbon/Nitrogen ratio
Salinity
Temperature, water
Alkalinity, total
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
spellingShingle Bacteria
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Synechococcus sp.
Type of study
Species
Treatment
Replicate
Irradiance
Growth rate
Chlorophyll a per cell
Photosynthetic carbon fixation rate per cell
Photosynthetic carbon fixation rate, per chlorophyll a
Effective quantum yield
Photosynthetic quantum efficiency
Maximal electron transport rate, relative
Functional absorption cross sections of photosystem II reaction centers
Contribution
Ratio
Particulate organic carbon, per cell
Particulate organic nitrogen per cell
Carbon/Nitrogen ratio
Salinity
Temperature, water
Alkalinity, total
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
Li, He
Beardall, John
Gao, Kunshan
Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...
topic_facet Bacteria
Biomass/Abundance/Elemental composition
Bottles or small containers/Aquaria <20 L
Cyanobacteria
Growth/Morphology
Laboratory experiment
Laboratory strains
Light
Not applicable
Pelagos
Phytoplankton
Primary production/Photosynthesis
Single species
Synechococcus sp.
Type of study
Species
Treatment
Replicate
Irradiance
Growth rate
Chlorophyll a per cell
Photosynthetic carbon fixation rate per cell
Photosynthetic carbon fixation rate, per chlorophyll a
Effective quantum yield
Photosynthetic quantum efficiency
Maximal electron transport rate, relative
Functional absorption cross sections of photosystem II reaction centers
Contribution
Ratio
Particulate organic carbon, per cell
Particulate organic nitrogen per cell
Carbon/Nitrogen ratio
Salinity
Temperature, water
Alkalinity, total
pH
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide water at sea surface temperature wet air
Partial pressure of carbon dioxide water at sea surface temperature wet air
Bicarbonate ion
Carbonate ion
Carbon, inorganic, dissolved
Aragonite saturation state
Calcite saturation state
Calculated using seacarb after Nisumaa et al. 2010
Ocean Acidification International Coordination Centre OA-ICC
description The marine picocyanobacterium Synechococcus accounts for a major fraction of the primary production across the global oceans. However, knowledge of the responses of Synechococcus to changing pCO2 and light levels has been scarcely documented. Hence, we grew Synechococcus sp. CB0101 at two CO2 concentrations (ambient CO2 AC:410 μatm; high CO2 HC:1000 μatm) under various light levels between 25 and 800 μmol photons m−2 s−1 for 10–20 generations and found that the growth of Synechococcus strain CB0101 is strongly influenced by light intensity, peaking at 250 μmol m−2 s−1 and thereafter declined at higher light levels. Synechococcus cells showed a range of acclimation in their photophysiological characteristics, including changes in pigment content, optical absorption cross section, and light harvesting efficiency. Elevated pCO2 inhibited the growth of cells at light intensities close to or greater than saturation, with inhibition being greater under high light. Elevated pCO2 also reduced photosynthetic carbon ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-07-19. ...
format Dataset
author Li, He
Beardall, John
Gao, Kunshan
author_facet Li, He
Beardall, John
Gao, Kunshan
author_sort Li, He
title Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...
title_short Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...
title_full Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...
title_fullStr Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...
title_full_unstemmed Seawater carbonate chemistry and photoinhibition of the Picophytoplankter Synechococcus ...
title_sort seawater carbonate chemistry and photoinhibition of the picophytoplankter synechococcus ...
publisher PANGAEA
publishDate 2023
url https://dx.doi.org/10.1594/pangaea.961006
https://doi.pangaea.de/10.1594/PANGAEA.961006
genre Ocean acidification
genre_facet Ocean acidification
op_relation https://CRAN.R-project.org/package=seacarb
https://dx.doi.org/10.3390/w15061228
https://CRAN.R-project.org/package=seacarb
op_rights Creative Commons Attribution 4.0 International
https://creativecommons.org/licenses/by/4.0/legalcode
cc-by-4.0
op_doi https://doi.org/10.1594/pangaea.96100610.3390/w15061228
_version_ 1797591386849017856