Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ...
Estimating the heritability and genotype by environment (GxE) interactions of performance-related traits (e.g., growth, survival, reproduction) under future ocean conditions is necessary for inferring the adaptive potential of marine species to climate change. To date, no studies have used quantitat...
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Online Access: | https://dx.doi.org/10.1594/pangaea.959709 https://doi.pangaea.de/10.1594/PANGAEA.959709 |
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ftdatacite:10.1594/pangaea.959709 2024-04-28T08:34:51+00:00 Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... Munday, Philip L Schunter, Celia Allan, Bridie J M Nicol, Simon Parsons, Darren M Pether, Stephen M J Pope, Stephen Ravasi, Timothy Setiawan, Alvin N Smith, Neville Domingos, Jose A 2023 text/tab-separated-values https://dx.doi.org/10.1594/pangaea.959709 https://doi.pangaea.de/10.1594/PANGAEA.959709 en eng PANGAEA https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.3389/fevo.2019.00253 https://cran.r-project.org/web/packages/seacarb/index.html Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 Animalia Chordata Containers and aquaria 20-1000 L or < 1 m**2 Gene expression incl. proteomics Laboratory experiment Laboratory strains Nekton Not applicable Pelagos Seriola lalandi Single species Temperature Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Identification Time in days Treatment Locus Number Shannon Diversity Index Heterozygosity Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Calcite saturation state Calcite saturation state, standard deviation Calculated using seacarb after Nisumaa et al. 2010 Calculated using seacarb after Orr et al. 2018 dataset Dataset 2023 ftdatacite https://doi.org/10.1594/pangaea.95970910.3389/fevo.2019.00253 2024-04-02T11:36:31Z Estimating the heritability and genotype by environment (GxE) interactions of performance-related traits (e.g., growth, survival, reproduction) under future ocean conditions is necessary for inferring the adaptive potential of marine species to climate change. To date, no studies have used quantitative genetics techniques to test the adaptive potential of large pelagic fishes to the combined effects of elevated water temperature and ocean acidification. We used an experimental approach to test for heritability and GxE interactions in morphological traits of juvenile yellowtail kingfish, Seriola lalandi, under current-day and predicted future ocean conditions. We also tracked the fate of genetic diversity among treatments over the experimental period to test for selection favoring some genotypes over others under elevated temperature and CO2. Specifically, we reared kingfish to 21 days post hatching (dph) in a fully crossed 2 × 2 experimental design comprising current-day average summer temperature (21°C) and ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-06-08. ... Dataset Ocean acidification DataCite Metadata Store (German National Library of Science and Technology) |
institution |
Open Polar |
collection |
DataCite Metadata Store (German National Library of Science and Technology) |
op_collection_id |
ftdatacite |
language |
English |
topic |
Animalia Chordata Containers and aquaria 20-1000 L or < 1 m**2 Gene expression incl. proteomics Laboratory experiment Laboratory strains Nekton Not applicable Pelagos Seriola lalandi Single species Temperature Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Identification Time in days Treatment Locus Number Shannon Diversity Index Heterozygosity Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Calcite saturation state Calcite saturation state, standard deviation Calculated using seacarb after Nisumaa et al. 2010 Calculated using seacarb after Orr et al. 2018 |
spellingShingle |
Animalia Chordata Containers and aquaria 20-1000 L or < 1 m**2 Gene expression incl. proteomics Laboratory experiment Laboratory strains Nekton Not applicable Pelagos Seriola lalandi Single species Temperature Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Identification Time in days Treatment Locus Number Shannon Diversity Index Heterozygosity Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Calcite saturation state Calcite saturation state, standard deviation Calculated using seacarb after Nisumaa et al. 2010 Calculated using seacarb after Orr et al. 2018 Munday, Philip L Schunter, Celia Allan, Bridie J M Nicol, Simon Parsons, Darren M Pether, Stephen M J Pope, Stephen Ravasi, Timothy Setiawan, Alvin N Smith, Neville Domingos, Jose A Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... |
topic_facet |
Animalia Chordata Containers and aquaria 20-1000 L or < 1 m**2 Gene expression incl. proteomics Laboratory experiment Laboratory strains Nekton Not applicable Pelagos Seriola lalandi Single species Temperature Type of study Species, unique identification Species, unique identification URI Species, unique identification Semantic URI Identification Time in days Treatment Locus Number Shannon Diversity Index Heterozygosity Temperature, water Temperature, water, standard deviation Salinity Salinity, standard deviation pH pH, standard deviation Alkalinity, total Alkalinity, total, standard deviation Partial pressure of carbon dioxide water at sea surface temperature wet air Partial pressure of carbon dioxide, standard deviation Carbonate system computation flag Carbon dioxide Carbon dioxide, standard deviation Fugacity of carbon dioxide water at sea surface temperature wet air Fugacity of carbon dioxide in seawater, standard deviation Bicarbonate ion Bicarbonate ion, standard deviation Carbonate ion Carbonate ion, standard deviation Carbon, inorganic, dissolved Carbon, inorganic, dissolved, standard deviation Aragonite saturation state Aragonite saturation state, standard deviation Calcite saturation state Calcite saturation state, standard deviation Calculated using seacarb after Nisumaa et al. 2010 Calculated using seacarb after Orr et al. 2018 |
description |
Estimating the heritability and genotype by environment (GxE) interactions of performance-related traits (e.g., growth, survival, reproduction) under future ocean conditions is necessary for inferring the adaptive potential of marine species to climate change. To date, no studies have used quantitative genetics techniques to test the adaptive potential of large pelagic fishes to the combined effects of elevated water temperature and ocean acidification. We used an experimental approach to test for heritability and GxE interactions in morphological traits of juvenile yellowtail kingfish, Seriola lalandi, under current-day and predicted future ocean conditions. We also tracked the fate of genetic diversity among treatments over the experimental period to test for selection favoring some genotypes over others under elevated temperature and CO2. Specifically, we reared kingfish to 21 days post hatching (dph) in a fully crossed 2 × 2 experimental design comprising current-day average summer temperature (21°C) and ... : In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-06-08. ... |
format |
Dataset |
author |
Munday, Philip L Schunter, Celia Allan, Bridie J M Nicol, Simon Parsons, Darren M Pether, Stephen M J Pope, Stephen Ravasi, Timothy Setiawan, Alvin N Smith, Neville Domingos, Jose A |
author_facet |
Munday, Philip L Schunter, Celia Allan, Bridie J M Nicol, Simon Parsons, Darren M Pether, Stephen M J Pope, Stephen Ravasi, Timothy Setiawan, Alvin N Smith, Neville Domingos, Jose A |
author_sort |
Munday, Philip L |
title |
Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... |
title_short |
Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... |
title_full |
Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... |
title_fullStr |
Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... |
title_full_unstemmed |
Seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (Seriola lalandi) ... |
title_sort |
seawater carbonate chemistry and genetic diversity of juvenile yellowtail kingfish (seriola lalandi) ... |
publisher |
PANGAEA |
publishDate |
2023 |
url |
https://dx.doi.org/10.1594/pangaea.959709 https://doi.pangaea.de/10.1594/PANGAEA.959709 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
https://cran.r-project.org/web/packages/seacarb/index.html https://dx.doi.org/10.3389/fevo.2019.00253 https://cran.r-project.org/web/packages/seacarb/index.html |
op_rights |
Creative Commons Attribution 4.0 International https://creativecommons.org/licenses/by/4.0/legalcode cc-by-4.0 |
op_doi |
https://doi.org/10.1594/pangaea.95970910.3389/fevo.2019.00253 |
_version_ |
1797591386233503744 |